Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_G13
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.009
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.009
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.009
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.087
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.087
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.087
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.27
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.27
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.81
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.81
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 31 0.81
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 1.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 1.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.3
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.3
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 29 3.3
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 5.7
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF000196-9|AAO61448.1| 395|Caenorhabditis elegans Hypothetical ... 28 10.0
AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical ... 28 10.0
AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical ... 28 10.0
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 28 10.0
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/75 (36%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPP--GXXPPPXXYFSP 697
P PPP +G PP PP G PP PPP G PPP SP
Sbjct: 238 PPPPPPKGSPPLAGSGSPPP---PPAA-----GSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Query: 696 XPPXXGGGRPRXFPR 652
PP G P PR
Sbjct: 290 PPPRAGSPPPPPPPR 304
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/71 (35%), Positives = 26/71 (36%)
Frame = -1
Query: 864 PPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPPX 685
PPP G PP G PP PP +PP G PPP S PP
Sbjct: 273 PPPPTGSPPP-----PPAGGSPPPPRA--GSPPPPPPPRGSPPTGSLPPPQAGGS--PPP 323
Query: 684 XGGGRPRXFPR 652
G G P PR
Sbjct: 324 AGTGSPPPPPR 334
Score = 31.5 bits (68), Expect = 0.81
Identities = 23/72 (31%), Positives = 24/72 (33%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP RG P G PP G PP K P PP + P
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAG---TGSPPPPPRQKRQAPERSPPTGSPPTGSP 354
Query: 690 PXXGGGRPRXFP 655
P G PR P
Sbjct: 355 PT--GRPPRGGP 364
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 768 PPXXXXXKNPPPGXXPPPXXYFSPXPPXXGGGRP 667
PP PPP PP SP PP G P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 265
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/75 (36%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPP--GXXPPPXXYFSP 697
P PPP +G PP PP G PP PPP G PPP SP
Sbjct: 259 PPPPPPKGSPPLAGSGSPPP---PPAA-----GSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Query: 696 XPPXXGGGRPRXFPR 652
PP G P PR
Sbjct: 311 PPPRAGSPPPPPPPR 325
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/71 (35%), Positives = 26/71 (36%)
Frame = -1
Query: 864 PPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPPX 685
PPP G PP G PP PP +PP G PPP S PP
Sbjct: 294 PPPPTGSPPP-----PPAGGSPPPPRA--GSPPPPPPPRGSPPTGSLPPPQAGGS--PPP 344
Query: 684 XGGGRPRXFPR 652
G G P PR
Sbjct: 345 AGTGSPPPPPR 355
Score = 31.5 bits (68), Expect = 0.81
Identities = 23/72 (31%), Positives = 24/72 (33%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP RG P G PP G PP K P PP + P
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAG---TGSPPPPPRQKRQAPERSPPTGSPPTGSP 375
Query: 690 PXXGGGRPRXFP 655
P G PR P
Sbjct: 376 PT--GRPPRGGP 385
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 768 PPXXXXXKNPPPGXXPPPXXYFSPXPPXXGGGRP 667
PP PPP PP SP PP G P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 286
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/75 (36%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPP--GXXPPPXXYFSP 697
P PPP +G PP PP G PP PPP G PPP SP
Sbjct: 244 PPPPPPKGSPPLAGSGSPPP---PPAA-----GSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Query: 696 XPPXXGGGRPRXFPR 652
PP G P PR
Sbjct: 296 PPPRAGSPPPPPPPR 310
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/71 (35%), Positives = 26/71 (36%)
Frame = -1
Query: 864 PPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPPX 685
PPP G PP G PP PP +PP G PPP S PP
Sbjct: 279 PPPPTGSPPP-----PPAGGSPPPPRA--GSPPPPPPPRGSPPTGSLPPPQAGGS--PPP 329
Query: 684 XGGGRPRXFPR 652
G G P PR
Sbjct: 330 AGTGSPPPPPR 340
Score = 31.5 bits (68), Expect = 0.81
Identities = 23/72 (31%), Positives = 24/72 (33%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP RG P G PP G PP K P PP + P
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAG---TGSPPPPPRQKRQAPERSPPTGSPPTGSP 360
Query: 690 PXXGGGRPRXFP 655
P G PR P
Sbjct: 361 PT--GRPPRGGP 370
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 768 PPXXXXXKNPPPGXXPPPXXYFSPXPPXXGGGRP 667
PP PPP PP SP PP G P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 271
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.087
Identities = 24/68 (35%), Positives = 24/68 (35%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G PP PP G PP PPPG PPP P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPP--PPPGGLPPISGGPPPPP----PPPGGCPPPPP--PPPP 777
Query: 690 PXXGGGRP 667
GG P
Sbjct: 778 GGFKGGPP 785
Score = 32.7 bits (71), Expect = 0.35
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G + PP PP PP PPP PPP F+P
Sbjct: 742 PPPPPPPGGLPP-ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP---PPPPGMFAPMA 797
Query: 690 P 688
P
Sbjct: 798 P 798
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 742 PPPGXXXPPXFXFFPPPPXXXGGKTPXFPP 653
PPP PP PPPP GG P PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXX-KNPPPGXXPPPXXYFSPX 694
P PPP PP G PP PP PP PPP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 693 PPXXGGG 673
PP GG
Sbjct: 773 PPPPPGG 779
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = -1
Query: 861 PPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPPXX 682
PP G P G PP G PP PPP PP P PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPP--GGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 681 GGGRP 667
GG P
Sbjct: 765 PGGCP 769
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 742 PPPGXXXPPXFXFFPPPPXXXGGKTPXFPP 653
PPPG PP PPP GG P PP
Sbjct: 763 PPPGGCPPPPPP--PPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.087
Identities = 24/68 (35%), Positives = 24/68 (35%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G PP PP G PP PPPG PPP P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPP--PPPGGLPPISGGPPPPP----PPPGGCPPPPP--PPPP 777
Query: 690 PXXGGGRP 667
GG P
Sbjct: 778 GGFKGGPP 785
Score = 32.7 bits (71), Expect = 0.35
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G + PP PP PP PPP PPP F+P
Sbjct: 742 PPPPPPPGGLPP-ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP---PPPPGMFAPMA 797
Query: 690 P 688
P
Sbjct: 798 P 798
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 742 PPPGXXXPPXFXFFPPPPXXXGGKTPXFPP 653
PPP PP PPPP GG P PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXX-KNPPPGXXPPPXXYFSPX 694
P PPP PP G PP PP PP PPP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 693 PPXXGGG 673
PP GG
Sbjct: 773 PPPPPGG 779
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = -1
Query: 861 PPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPPXX 682
PP G P G PP G PP PPP PP P PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPP--GGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 681 GGGRP 667
GG P
Sbjct: 765 PGGCP 769
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 742 PPPGXXXPPXFXFFPPPPXXXGGKTPXFPP 653
PPPG PP PPP GG P PP
Sbjct: 763 PPPGGCPPPPPP--PPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.087
Identities = 24/68 (35%), Positives = 24/68 (35%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G PP PP G PP PPPG PPP P P
Sbjct: 309 PPPPPPPGGLPPITGGPPPP--PPPGGLPPISGGPPPPP----PPPGGCPPPPP--PPPP 360
Query: 690 PXXGGGRP 667
GG P
Sbjct: 361 GGFKGGPP 368
Score = 32.7 bits (71), Expect = 0.35
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G + PP PP PP PPP PPP F+P
Sbjct: 325 PPPPPPPGGLPP-ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP---PPPPGMFAPMA 380
Query: 690 P 688
P
Sbjct: 381 P 381
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 742 PPPGXXXPPXFXFFPPPPXXXGGKTPXFPP 653
PPP PP PPPP GG P PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXX-KNPPPGXXPPPXXYFSPX 694
P PPP PP G PP PP PP PPP P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 693 PPXXGGG 673
PP GG
Sbjct: 356 PPPPPGG 362
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = -1
Query: 861 PPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPPXX 682
PP G P G PP G PP PPP PP P PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPP--GGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Query: 681 GGGRP 667
GG P
Sbjct: 348 PGGCP 352
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 742 PPPGXXXPPXFXFFPPPPXXXGGKTPXFPP 653
PPPG PP PPP GG P PP
Sbjct: 346 PPPGGCPPPPPP--PPPGGFKGGPPPPPPP 373
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Frame = -1
Query: 864 PPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPP---GXXPPPXXYFSPX 694
PPP F+ P G PP F G PP PPP G PPP + +P
Sbjct: 66 PPPVPNG---FIPPPPGPGGIPPPPPMFAGGIPP-------PPPMMGGIPPPPPMFGAPP 115
Query: 693 PPXXGGGRPRXFPRXXXKKTP 631
PP G P+ KTP
Sbjct: 116 PPPPPSGL-GVAPQPPRPKTP 135
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = -1
Query: 816 PXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFS---PXPPXXGGGRP 667
P G+ P F P P PG PPP F+ P PP GG P
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIP 105
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PP + PP G PP + PP PPP PPP +F P
Sbjct: 275 PYGPP-HPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPP--HFGMGP 331
Query: 690 P 688
P
Sbjct: 332 P 332
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = -1
Query: 828 FXXPPXGKXPPXXXXFY-XGXPPXXXXXKNPPPGXXPPPXXYFSPXPP--XXGGGRPRXF 658
F PP G PP F G PP PP PP + P P GG P F
Sbjct: 296 FPPPPRGHFPPPPPHFMGRGMPPPFMPP--PPHFGMGPPRGFMPPPHPMMFRGGPYPPFF 353
Query: 657 P 655
P
Sbjct: 354 P 354
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = -1
Query: 864 PPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPPX 685
PPP F PP G PP + G P PP PPP + P P
Sbjct: 317 PPPFMPPPPHFGMG-PPRGFMPPPHPMMFRGGP--------YPPFFPPPPPHFMRPSSPP 367
Query: 684 XGGG 673
GG
Sbjct: 368 TDGG 371
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -3
Query: 742 PPPGXXXPPXFXFFPPPPXXXGGK---TPXFPP 653
PP G PP FPPPP G+ P PP
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPP 323
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PP + PP G PP + PP PPP PPP +F P
Sbjct: 275 PYGPP-HPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPP--HFGMGP 331
Query: 690 P 688
P
Sbjct: 332 P 332
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = -1
Query: 828 FXXPPXGKXPPXXXXFY-XGXPPXXXXXKNPPPGXXPPPXXYFSPXPP--XXGGGRPRXF 658
F PP G PP F G PP PP PP + P P GG P F
Sbjct: 296 FPPPPRGHFPPPPPHFMGRGMPPPFMPP--PPHFGMGPPRGFMPPPHPMMFRGGPYPPFF 353
Query: 657 P 655
P
Sbjct: 354 P 354
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = -1
Query: 864 PPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPPX 685
PPP F PP G PP + G P PP PPP + P P
Sbjct: 317 PPPFMPPPPHFGMG-PPRGFMPPPHPMMFRGGP--------YPPFFPPPPPHFMRPSSPP 367
Query: 684 XGGG 673
GG
Sbjct: 368 TDGG 371
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -3
Query: 742 PPPGXXXPPXFXFFPPPPXXXGGK---TPXFPP 653
PP G PP FPPPP G+ P PP
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPP 323
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.81
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = -1
Query: 864 PPPXRGXXXX-FLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPP 688
PPP G + PP PP PP PPP PP + P PP
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPP---PPSSGMWPPPPP 301
Query: 687 XXGGGRP 667
G P
Sbjct: 302 PPPGRTP 308
Score = 31.5 bits (68), Expect = 0.81
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXX-KNPPPGXXPPPXXYFSPX 694
P PPP R PP PP + G PP + PG PPP P
Sbjct: 318 PPPPPSRFGPPGMGGMPPP----PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPA 373
Query: 693 PPXXGGGRP 667
PP G P
Sbjct: 374 PPSGHGMIP 382
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Frame = -3
Query: 742 PPPGXXXPPXFXFFPPPP----XXXGGKTPXFPPXXXKKNPXL 626
PPP PP PPPP GG P PP P +
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 362
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/80 (30%), Positives = 26/80 (32%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G PP G+ P G PP PPP PP P P
Sbjct: 287 PPPPPSSGMWPPP--PPPPPGRTPGPPGM--PGMPPP------PPPSRFGPPGMGGMPPP 336
Query: 690 PXXGGGRPRXFPRXXXKKTP 631
P G P P + P
Sbjct: 337 PPPGMRYPGGMPPPPPPRYP 356
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/80 (27%), Positives = 25/80 (31%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP R + PP PP F PP PPP P P P
Sbjct: 300 PPPPPGRTPGPPGMPGMPP----PPPPSRF---GPPGMGGMPPPPPPGMRYPGGMPPPPP 352
Query: 690 PXXGGGRPRXFPRXXXKKTP 631
P P +P + P
Sbjct: 353 PRYPSAGPGMYPPPPPSRPP 372
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 745 KPPPGXXXPPXFXFFPPPPXXXGGKTPXFP 656
+PPP PP +PPPP G+TP P
Sbjct: 286 RPPP----PPSSGMWPPPPPPPPGRTPGPP 311
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.81
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = -1
Query: 864 PPPXRGXXXX-FLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPP 688
PPP G + PP PP PP PPP PP + P PP
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPP---PPSSGMWPPPPP 311
Query: 687 XXGGGRP 667
G P
Sbjct: 312 PPPGRTP 318
Score = 31.5 bits (68), Expect = 0.81
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXX-KNPPPGXXPPPXXYFSPX 694
P PPP R PP PP + G PP + PG PPP P
Sbjct: 328 PPPPPSRFGPPGMGGMPPP----PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPA 383
Query: 693 PPXXGGGRP 667
PP G P
Sbjct: 384 PPSGHGMIP 392
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Frame = -3
Query: 742 PPPGXXXPPXFXFFPPPP----XXXGGKTPXFPPXXXKKNPXL 626
PPP PP PPPP GG P PP P +
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 372
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/80 (30%), Positives = 26/80 (32%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G PP G+ P G PP PPP PP P P
Sbjct: 297 PPPPPSSGMWPPP--PPPPPGRTPGPPGM--PGMPPP------PPPSRFGPPGMGGMPPP 346
Query: 690 PXXGGGRPRXFPRXXXKKTP 631
P G P P + P
Sbjct: 347 PPPGMRYPGGMPPPPPPRYP 366
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/80 (27%), Positives = 25/80 (31%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP R + PP PP F PP PPP P P P
Sbjct: 310 PPPPPGRTPGPPGMPGMPP----PPPPSRF---GPPGMGGMPPPPPPGMRYPGGMPPPPP 362
Query: 690 PXXGGGRPRXFPRXXXKKTP 631
P P +P + P
Sbjct: 363 PRYPSAGPGMYPPPPPSRPP 382
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 745 KPPPGXXXPPXFXFFPPPPXXXGGKTPXFP 656
+PPP PP +PPPP G+TP P
Sbjct: 296 RPPP----PPSSGMWPPPPPPPPGRTPGPP 321
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 31.5 bits (68), Expect = 0.81
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Frame = -1
Query: 819 PPXGKXP-PXXXXFYXGXPPXXXXX-KNPPP---GXXPPPXXYFSPXPPXXGGG 673
PP P P F G PP + PPP G PPP Y++ PP G
Sbjct: 60 PPSTMPPGPHGMPFMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPPQSG 113
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 742 PPPGXXXPPXFXFFPPPPXXXGGKTP 665
PPP PP PPPP G KTP
Sbjct: 84 PPPPPPPPPPTLKAPPPPPILGLKTP 109
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 7/58 (12%)
Frame = -1
Query: 819 PPXGKXPPXXXXF--YXGXPPXXXXXKN---PPP--GXXPPPXXYFSPXPPXXGGGRP 667
PP G PP + G PP + PPP G PP P PP GG P
Sbjct: 1554 PPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPP 1611
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Frame = -2
Query: 863 PPPXXGXXXXFYLXXPXXEKXPXPXXFFXXGGPXFXXXLKTPPRGXXPPXFXIFPP---X 693
PPP G + P P GGP + +P RG PP PP
Sbjct: 1436 PPPVMGGHEGSWRGGPPMRGMPPLGMMRGRGGPPPPRGMNSPMRGMPPPMRGGGPPMRGG 1495
Query: 692 PXLXGGEDPVF 660
P + GG P+F
Sbjct: 1496 PPMRGG-PPMF 1505
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/65 (29%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXP----PXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYF 703
P PPP PP P P + PP PPP PPP ++
Sbjct: 95 PAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPP------PPPPHYPPPPPHY 148
Query: 702 SPXPP 688
P PP
Sbjct: 149 PPPPP 153
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = -1
Query: 774 GXPPXXXXXKNPPPGXX--PPPXXYFSPXPPXXGGGRP 667
G PP PP G PPP + +P P GG P
Sbjct: 332 GAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPP 369
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G P PP G PP PPP PPP P P
Sbjct: 542 PPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPP------PPP---PPPMLGGPPPP 592
Query: 690 PXXGGG 673
P GG
Sbjct: 593 PPPPGG 598
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 653 RGKXRGLPPPXXGGXGEKXKXGGGXXPGGG 742
RG RG+P GG G + + GGG GGG
Sbjct: 804 RGGKRGIPKKTGGGGGGRGRGGGGR--GGG 831
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 768 PPXXXXXKNPPPGXXPPPXXYFSPXPP 688
PP PPPG PP Y P PP
Sbjct: 94 PPPPRNNCLPPPGPPPPCQQYQQPQPP 120
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 768 PPXXXXXKNPPPGXXPPPXXYFSPXPP 688
PP PPPG PP Y P PP
Sbjct: 94 PPPPRNNCLPPPGPPPPCQQYQQPQPP 120
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 768 PPXXXXXKNPPPGXXPPPXXYFSPXPP 688
PP PPPG PP Y P PP
Sbjct: 94 PPPPRNNCLPPPGPPPPCQQYQQPQPP 120
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = -1
Query: 819 PPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPPXXGGGRPRXFP 655
PP P Y P +N P PP P PP GG P P
Sbjct: 75 PPSAMRAPPPQPTYENRPTTGMSMRNGGP-PVPPSRSGMIPVPPSRSGGPPAPMP 128
>AF000196-9|AAO61448.1| 395|Caenorhabditis elegans Hypothetical
protein B0041.2c protein.
Length = 395
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +2
Query: 665 RGLPPPX-XGGXGEKXKXGGGXXPGGGFLXXXKXGGXP 775
RG PPP GG G GG GG GG P
Sbjct: 347 RGGPPPGSDGGAGPSTSRSGGGGAAGGDSFNSSGGGGP 384
>AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical
protein B0041.2b protein.
Length = 624
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +2
Query: 665 RGLPPPX-XGGXGEKXKXGGGXXPGGGFLXXXKXGGXP 775
RG PPP GG G GG GG GG P
Sbjct: 576 RGGPPPGSDGGAGPSTSRSGGGGAAGGDSFNSSGGGGP 613
>AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical
protein B0041.2a protein.
Length = 706
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +2
Query: 665 RGLPPPX-XGGXGEKXKXGGGXXPGGGFLXXXKXGGXP 775
RG PPP GG G GG GG GG P
Sbjct: 658 RGGPPPGSDGGAGPSTSRSGGGGAAGGDSFNSSGGGGP 695
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 675 PPXXXGGGGKNXKXGGXXXPGGG 743
PP G GKN K G PG G
Sbjct: 220 PPGPPGANGKNGKQGADGIPGAG 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,735,828
Number of Sequences: 27780
Number of extensions: 260039
Number of successful extensions: 1385
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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