Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_G10
(1022 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 49 1e-06
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 42 1e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.002
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.007
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.009
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.016
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.037
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 32 0.15
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.20
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.35
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.46
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.60
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 30 0.60
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 30 0.60
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 1.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.3
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 7.4
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 7.4
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 7.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 8.2
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 26 9.8
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 48.8 bits (111), Expect = 1e-06
Identities = 35/136 (25%), Positives = 40/136 (29%), Gaps = 7/136 (5%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXT----PTTXXXXXPPXPPPXAXXRPXP---GXPHPXXPRXXXPXXP 740
P P P PP P + P PP P P P P G P P P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 741 XXPNTXXXPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPR 920
P++ P P P P P PPP P PT P P
Sbjct: 1173 A-PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 921 GPXXTPXTPPXTTRXP 968
P P ++ P
Sbjct: 1232 PTAKAPPVPAPSSEAP 1247
Score = 44.4 bits (100), Expect = 3e-05
Identities = 35/145 (24%), Positives = 40/145 (27%), Gaps = 4/145 (2%)
Frame = +3
Query: 576 TXPPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXR--PXPGXPHPXXPRXXXPXXPXXP 749
T PP P P P + + PP P P + P P P P P P
Sbjct: 1039 TAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK-P 1097
Query: 750 NTXXXPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXP--TXXXXPXPXPRG 923
+ P P P P P P P P P + P P P G
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157
Query: 924 PXXTPXTPPXTTRXPXPXXGXRPRP 998
P P P G P P
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 43.2 bits (97), Expect = 6e-05
Identities = 32/139 (23%), Positives = 34/139 (24%), Gaps = 2/139 (1%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXR-PXPGXPHPXXPRXXXPXXPXXPNTX 758
P PP P P PP P P P P P P+ P +
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 759 XXPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTP 938
P P A P P P P P P P P P P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179
Query: 939 XTP-PXTTRXPXPXXGXRP 992
P P P P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAP 1198
Score = 40.7 bits (91), Expect = 3e-04
Identities = 34/137 (24%), Positives = 38/137 (27%)
Frame = +3
Query: 588 PPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXPXXPNTXXXP 767
PP P P P P P A P P P P+ P P + P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 768 XXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTPXTP 947
P P P P P PP P PT P P P + TP
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVP----TPSAGLPP---VPVPTAKAPPVPAPSSEAPSVSTP 1252
Query: 948 PXTTRXPXPXXGXRPRP 998
+ P P P P
Sbjct: 1253 --RSSVPSPHSNASPSP 1267
Score = 40.3 bits (90), Expect = 4e-04
Identities = 36/144 (25%), Positives = 41/144 (28%), Gaps = 14/144 (9%)
Frame = +3
Query: 585 PPPPXXPP-PXPPXTPTTXXXXX--PPXPPPXAXXRPXPGXPH-PXXPRXXXPXXPXXPN 752
P P PP P P P PP P P P P P P+ P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 753 TXXXPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAG---XPXPTXXXXP------ 905
+ P P A P P P P P +G P P P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE 1196
Query: 906 -XPXPRGPXXTPXTPPXTTRXPXP 974
P P+ P PP +T P P
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 39.5 bits (88), Expect = 7e-04
Identities = 33/137 (24%), Positives = 40/137 (29%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXPXXPNTXX 761
P PP PPP P + PP P + P P P P P ++
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKL-SSKA 1021
Query: 762 XPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTPX 941
P P A P P P P P P + P+ P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTP---PVPKSSSGAPS---APPPVPAPSSEIPS 1075
Query: 942 TPPXTTRXPXPXXGXRP 992
P + P P P
Sbjct: 1076 IPAPSGAPPVPAPSGIP 1092
Score = 34.3 bits (75), Expect = 0.028
Identities = 36/147 (24%), Positives = 42/147 (28%), Gaps = 2/147 (1%)
Frame = +3
Query: 576 TXPPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXPXXP-N 752
T P P PP P + PP P P A P P P P P P +
Sbjct: 1002 TSPAAPLARVPPVPKLSSKA-----PPVPLPSADAPPIP-VPSTAPPVPIPTSTPPVPKS 1055
Query: 753 TXXXPXXGPXXXAXGAXXPXXH-PAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPX 929
+ P P A + P P+ P PP P P+ P P P
Sbjct: 1056 SSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP----VPKPSVAAPPVPKPSVAV 1111
Query: 930 XTPXTPPXTTRXPXPXXGXRPRPXARG 1010
P P P P P G
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.9 bits (94), Expect = 1e-04
Identities = 33/134 (24%), Positives = 36/134 (26%), Gaps = 3/134 (2%)
Frame = +3
Query: 582 PPPPPXXPPPXPPX-TPTTXXXXXPPXPPP--XAXXRPXPGXPHPXXPRXXXPXXPXXPN 752
PP PP P PP P+ PP PPP P P P P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 753 TXXXPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXX 932
P A A P P R PP G + P P
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Query: 933 TPXTPPXTTRXPXP 974
+ PP P P
Sbjct: 350 SIPLPPQGRSAPPP 363
Score = 39.9 bits (89), Expect = 6e-04
Identities = 34/141 (24%), Positives = 38/141 (26%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXPXXPNTXX 761
P PP P PP + P P + P P P P P P N
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASR 411
Query: 762 XPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTPX 941
P + P P+ P P A P P P P G P
Sbjct: 412 TST--PPVPTPPSLPPSAPPSLPPSAP-PSLPMGAPAAPPLPPSAPIAPPLPAG---MPA 465
Query: 942 TPPXTTRXPXPXXGXRPRPXA 1004
PP P P P P A
Sbjct: 466 APPLPPAAPAPPPAPAPAPAA 486
Score = 37.9 bits (84), Expect = 0.002
Identities = 29/127 (22%), Positives = 31/127 (24%), Gaps = 5/127 (3%)
Frame = +3
Query: 603 PPPXPPXTPTTXXXXXPPX-----PPPXAXXRPXPGXPHPXXPRXXXPXXPXXPNTXXXP 767
PPP PP + PP PPP P G P P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 768 XXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTPXTP 947
P G P P P PP P+ P P P P
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Query: 948 PXTTRXP 968
P P
Sbjct: 458 PLPAGMP 464
Score = 35.5 bits (78), Expect = 0.012
Identities = 24/90 (26%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Frame = +1
Query: 643 TXAPPXPXXXPXXAPPRALXTXXPPAXPPXXXPXNQT--XXPXHXXDQXXPPXXRXXPXX 816
T APP P P PP + + PA PP P N T P P
Sbjct: 227 TSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINS 286
Query: 817 TPHXPAXXXGPRXXHPHXPXXRXPPTPXPP 906
T P R + P P PP
Sbjct: 287 TSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 33.9 bits (74), Expect = 0.037
Identities = 28/122 (22%), Positives = 31/122 (25%)
Frame = +3
Query: 603 PPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXPXXPNTXXXPXXGPX 782
PPP PP P + P PP P P P P P + P
Sbjct: 337 PPPPPP--PRSNAAGSIPLPPQGRSAPPPP--PPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Query: 783 XXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTPXTPPXTTR 962
G P P P P + P P P P P PP
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452
Query: 963 XP 968
P
Sbjct: 453 AP 454
Score = 33.9 bits (74), Expect = 0.037
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +3
Query: 576 TXPPPPPXXPPPXPPXTPTTXXXXXPPXP--PPXAXXRPXPGXPHPXXPRXXXPXXPXXP 749
T P PP PP PP P + P P PP A P P P P P P
Sbjct: 419 TPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP----PLPAGMPAAPPLPPAAP 474
Query: 750 NTXXXPXXGP 779
P P
Sbjct: 475 APPPAPAPAP 484
Score = 33.5 bits (73), Expect = 0.049
Identities = 27/109 (24%), Positives = 28/109 (25%), Gaps = 1/109 (0%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXP-XXPNTX 758
P PPP P P P PP P P P P P P P
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP-PSLPPSAPPSLPMGAPAAP 447
Query: 759 XXPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXP 905
P P A P P P P P P P + P
Sbjct: 448 PLPPSAPIAPPLPAGMPAA-PPLPPAAPAPPPAPAPAPAAPVASIAELP 495
Score = 31.5 bits (68), Expect = 0.20
Identities = 34/138 (24%), Positives = 38/138 (27%), Gaps = 11/138 (7%)
Frame = +3
Query: 570 TXTXPPPPPXXPPPXPPXTPTTXXXXXPPXPPPXA----------XXRPXPGXPHPXXPR 719
T + PP P P P PP PPP + RP P P R
Sbjct: 263 TVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNR 322
Query: 720 XXXPXXPXXPN-TXXXPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXX 896
P N + P P A G+ P P P PPP P
Sbjct: 323 GKPPIGNGSSNSSLPPPPPPPRSNAAGSI-----PLPPQGRSAP--PPPPPRSAPSTGRQ 375
Query: 897 XXPXPXPRGPXXTPXTPP 950
P R P PP
Sbjct: 376 PPPLSSSRAVSNPPAPPP 393
Score = 27.1 bits (57), Expect = 4.3
Identities = 33/129 (25%), Positives = 35/129 (27%), Gaps = 9/129 (6%)
Frame = +2
Query: 587 PPPXXXPPRPXXHXHHXXXPXPPX-APXXXPXPPX--PGXSXPXXPPXXXPXX----PXX 745
PPP PPR P A P PP PG S P PP P
Sbjct: 361 PPPP--PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVP 418
Query: 746 TKHXXXPT-PXTXXXRXRXXXXQXTPRXPXRRXXAXXTXT-PTRRXPXPHXXPXPPXRXP 919
T P+ P + P P A P P P P P
Sbjct: 419 TPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Query: 920 RPXPXPTXP 946
P P P P
Sbjct: 479 APAPAPAAP 487
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.9 bits (84), Expect = 0.002
Identities = 28/83 (33%), Positives = 30/83 (36%)
Frame = -2
Query: 829 GXAGCXLGXXAPXAXXXGPWXGXXXVFGXXGXXGXXXRGXXGXGXPGXGRXXAXGGGXGG 650
G G G + P G FG G G G G G G G GG GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGG-GPGGFEGGPGGFGG 242
Query: 649 XXXXXVVGVXGGXGGGXXGGGGG 581
G+ GG GGG G GGG
Sbjct: 243 GPGGFGGGL-GGFGGGPGGFGGG 264
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.3 bits (80), Expect = 0.007
Identities = 34/131 (25%), Positives = 36/131 (27%), Gaps = 8/131 (6%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXPPXPPPX-AXXRPXPGXPHPXXPRXXXPXXPXXPNTX 758
PP P P P P T P PPP A P P P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP--V 181
Query: 759 XXPXXGPXXXAXGAXXPXXHPAXPXXXX-------RPXXXPPPXAGXPXPTXXXXPXPXP 917
P P + P P P RP PP P T P
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPN- 240
Query: 918 RGPXXTPXTPP 950
RGP + P
Sbjct: 241 RGPSIPSASVP 251
Score = 34.7 bits (76), Expect = 0.021
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Frame = +3
Query: 576 TXPPPPPXXPPPXP---PXTPTTXXXXXPPXPPPXAXXRPXPGXPH-PXXPRXXXPXXPX 743
T PP P PPP P P P+ PPP P P P P P P
Sbjct: 141 TSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPK 200
Query: 744 XP 749
P
Sbjct: 201 VP 202
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.009
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 585 PPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHP 707
P P P P PP P PP PP A P P P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 34.7 bits (76), Expect = 0.021
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 6/51 (11%)
Frame = +3
Query: 582 PPPPPXX------PPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXP 716
PPPPP P P P P PP PPP P P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.9 bits (74), Expect = 0.037
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +3
Query: 582 PPPPPXX--PPPXPPXTPTTXXXXXPPXPPPXA 674
PPP P PPP PP PP PPP A
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 33.5 bits (73), Expect = 0.049
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 628 PPXPPTXAPPXPXXXPXXAPPRALXTXXPPAXPP 729
PP PP P P P PP A PP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 31.5 bits (68), Expect = 0.20
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = +3
Query: 603 PPPXPP--XTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXPXXP 749
PPP PP PT P PP P P P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/63 (26%), Positives = 18/63 (28%), Gaps = 1/63 (1%)
Frame = +2
Query: 587 PPPXXXPPRPXXHXHHXXXPXP-PXAPXXXPXPPXPGXSXPXXPPXXXPXXPXXTKHXXX 763
PPP P P P P P P PP + P PP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYA 794
Query: 764 PTP 772
P P
Sbjct: 795 PAP 797
Score = 27.1 bits (57), Expect = 4.3
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 4/55 (7%)
Frame = +3
Query: 858 PPPXAGXPXPTXXXXPXPXPR----GPXXTPXTPPXTTRXPXPXXGXRPRPXARG 1010
PPP P P P P P GP P P P P P A G
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 26.2 bits (55), Expect = 7.4
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Frame = +3
Query: 582 PPPPPXX-----PPPXPPXTPTTXXXXXPPXPPPXAXXRP 686
PPPPP PPP PP + P P A P
Sbjct: 764 PPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.1 bits (77), Expect = 0.016
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHP 707
PPPPP PP PP P P PPP P P+P
Sbjct: 1707 PPPPPMSVPP-PPSAP-PMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 33.5 bits (73), Expect = 0.049
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +3
Query: 576 TXPPPPPXXPPP--XPPXTPTTXXXXXPPXPPPXAXXRPXPG 695
T PPPP PPP PP PP P A P PG
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 29.9 bits (64), Expect = 0.60
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +3
Query: 822 AXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTPXTP-PXTTRXPXPXXGXR 989
A P P PPP + P P+ P P GP P P P ++ P G R
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPS----APPMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/65 (26%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = +3
Query: 585 PPPPXXPPPXPPXTPTTXXXXXP-PXPPPXAXXRPXPGXPHPXXPRXXXPXXPXXPNTXX 761
P P PP P + P P PPP + P P P P P +
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Query: 762 XPXXG 776
P G
Sbjct: 1743 VPNPG 1747
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRP--XPGXPHPXXPRXXXPXXP 740
PP P P PT PPP A P P P P P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 843 RPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTPXTPPXTTRXPXP 974
RP PP P P P P P PP P P
Sbjct: 1693 RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = +1
Query: 628 PPXPPTXAPPXPXXXPXXAPPRALXTXXPPAXPPXXXPXNQTXXPXHXXDQ 780
PP PP PP P P A PP+ PP P + + D+
Sbjct: 1707 PPPPPMSVPPPPSAPPMPA--------GPPSAPPPPLPASSAPSVPNPGDR 1749
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.9 bits (74), Expect = 0.037
Identities = 22/55 (40%), Positives = 22/55 (40%)
Frame = -2
Query: 748 GXXGXXGXXXRGXXGXGXPGXGRXXAXGGGXGGXXXXXVVGVXGGXGGGXXGGGG 584
G G G G G G GR A GGG GG G GG GG G GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGAR-----GGRGGRGGARGGRGG 59
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 31.9 bits (69), Expect = 0.15
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +3
Query: 570 TXTXPPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXPXXP 749
T PP P P P P P P PP A PG P P P P P
Sbjct: 496 TTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMAL---PPGMPAPFPGYPAVPAMPGIP 552
Query: 750 NTXXXP 767
P
Sbjct: 553 GATAPP 558
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.20
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 591 PPXXPPPXPPXTPTTXXXXXPPXPPP 668
PP PPP PP PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 0.80
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 588 PPPXXPPPXPPXTPTTXXXXXPPXPPP 668
PP PPP PP P PP PPP
Sbjct: 5 PPGNPPPPPPP--PGFEPPSQPPPPPP 29
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +2
Query: 650 PPXAPXXXPXPPXPGXSXPXXPPXXXPXXPXXTKHXXXPTP 772
PP P P PP PG P PP P P K TP
Sbjct: 5 PPGNPP--PPPPPPGFEPPSQPP--PPPPPGYVKKRKNKTP 41
Score = 26.6 bits (56), Expect = 5.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTP 629
PPPPP PP P P
Sbjct: 12 PPPPPGFEPPSQPPPP 27
Score = 26.2 bits (55), Expect = 7.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTP 629
PPPP PP PP P
Sbjct: 13 PPPPGFEPPSQPPPPP 28
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.35
Identities = 26/124 (20%), Positives = 27/124 (21%), Gaps = 2/124 (1%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXP--RXXXPXXPXXPNT 755
P P P PP P P PP P P P P P P
Sbjct: 566 PVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAV 625
Query: 756 XXXPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXXT 935
P A P+ P P P P P P
Sbjct: 626 PVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAV 685
Query: 936 PXTP 947
P P
Sbjct: 686 PVVP 689
Score = 29.9 bits (64), Expect = 0.60
Identities = 30/141 (21%), Positives = 31/141 (21%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXPXXPNTXX 761
P P P P P P PP P P P P P P
Sbjct: 551 PVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQP-------PVAPVVPEAPS 603
Query: 762 XPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTPX 941
P A PA P P PP A P P
Sbjct: 604 VPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPS 663
Query: 942 TPPXTTRXPXPXXGXRPRPXA 1004
P P P+P A
Sbjct: 664 VPQPPAAPVVPEVPSVPQPPA 684
Score = 29.1 bits (62), Expect = 1.1
Identities = 32/138 (23%), Positives = 34/138 (24%)
Frame = +3
Query: 591 PPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXPXXPNTXXXPX 770
P PP P P PP P P P R P P P+ P
Sbjct: 512 PSVPQPPAAPVVPEAPSVHQPPAAP---VAPEVPSAPQ----RPAAPVVPEAPSVPQRPA 564
Query: 771 XGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTPXTPP 950
A P P P P PP P P P P P P
Sbjct: 565 VPVVPEALSVPQPPVAPVAPEVPSVP--QPPVAPVVPEAPSVPQPPVAPVAP-EVPSVPQ 621
Query: 951 XTTRXPXPXXGXRPRPXA 1004
P P+P A
Sbjct: 622 RPAVPVVPEAPSVPQPPA 639
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.3 bits (65), Expect = 0.46
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 715 GXXGXGXPGXGRXXAXGGGXGGXXXXXVVGVXGGXGGGXXGGGGG 581
G G G GR + GG G G GG GGG GG G
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG 180
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.9 bits (64), Expect = 0.60
Identities = 27/123 (21%), Positives = 27/123 (21%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXPXXPNTXX 761
PPPP P P PPP P P P P P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 762 XPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTPX 941
P P H P P PP P P P P
Sbjct: 268 PGEHMPPPPMH--HEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 325
Query: 942 TPP 950
PP
Sbjct: 326 PPP 328
Score = 29.9 bits (64), Expect = 0.60
Identities = 27/123 (21%), Positives = 27/123 (21%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXPXXPNTXX 761
PPPP P P PPP P P P P P
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 762 XPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTPX 941
P P H P P PP P P P P
Sbjct: 281 PGEHMPPPPMH--HEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 338
Query: 942 TPP 950
PP
Sbjct: 339 PPP 341
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 29.9 bits (64), Expect = 0.60
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = +3
Query: 582 PP--PPPXXPPPXPPXTPTTXXXXXPPXPPPXAXX-RPXPGXPHPXXPRXXXPXXP 740
PP PPP P TP P P P A R P P P+ P P
Sbjct: 58 PPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQPYPPQGGYPQQP 113
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.9 bits (64), Expect = 0.60
Identities = 33/146 (22%), Positives = 36/146 (24%), Gaps = 8/146 (5%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXT-----PTTXXXXXPPXPPPXAXXRPXPGXPHPXXPRXXXPXXPXX 746
PPPP PP P P P A P P P
Sbjct: 926 PPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMPPSNPYT 985
Query: 747 PNTXXXPXXGPXXXAXGAXXPXXHPAXPXXXXRPXXXPPPX---AGXPXPTXXXXPXPXP 917
P P P R PP A P P P
Sbjct: 986 PIAVASSTVNPAHTYKPHGGSQIVPPPKQPANRVVPLPPTASQRASAYEPPTVSVPSPSA 1045
Query: 918 RGPXXTPXTPPXTTRXPXPXXGXRPR 995
P TP PP ++R P P RP+
Sbjct: 1046 LSPSVTPQLPPVSSRLP-PVSATRPQ 1070
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXPPXPPPXA-XXRPXPGXPHP 707
PPPPP P P + P PP A PG P P
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAP 1925
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +1
Query: 652 PPXPXXXPXXAPPRALXT-XXPPAXPP 729
PP P P PP A T PPA PP
Sbjct: 1884 PPPPMALPKAGPPSAAPTSALPPAGPP 1910
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 628 PPXPPTXAPPXPXXXPXXAPPRALXTXXPPA 720
PP PP A P P AP AL PPA
Sbjct: 1882 PPPPPPMALPKAGP-PSAAPTSALPPAGPPA 1911
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 4.3
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 582 PPPPPXXPPPXPPXTPTTXXXXXP 653
P PPP PP PP + T P
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMP 259
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Frame = +3
Query: 585 PPPPXXPPPXP-PXTPTTXXXXXPPXPPP 668
PPP PP P T PP PPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +3
Query: 588 PPPXXPPPXPPXTPTTXXXXXPPXPPPXAXXRPXPGXP 701
P P PP P PP P P PG P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEP 139
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 725 GXAGGXXVXXARGGAXXGXXXGXGGAXVGGXGG 627
G AG + GG G GGA +GG GG
Sbjct: 214 GAAGIDPMSLMGGGLGGAGLGGLGGAGLGGFGG 246
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/36 (30%), Positives = 13/36 (36%)
Frame = +3
Query: 843 RPXXXPPPXAGXPXPTXXXXPXPXPRGPXXTPXTPP 950
+P P P P P P P P +P PP
Sbjct: 724 KPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 8.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 585 PPPPXXPPP 611
PPPP PPP
Sbjct: 945 PPPPPPPPP 953
Score = 21.0 bits (42), Expect(2) = 8.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 570 TXTXPPPPPXXP 605
T PPPPP P
Sbjct: 903 THPTPPPPPPLP 914
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/46 (30%), Positives = 14/46 (30%), Gaps = 6/46 (13%)
Frame = +3
Query: 585 PPPPXXPPPX------PPXTPTTXXXXXPPXPPPXAXXRPXPGXPH 704
PPPP P P P P P PPP P H
Sbjct: 366 PPPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPAPAAAPAAEH 411
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,852,721
Number of Sequences: 5004
Number of extensions: 25176
Number of successful extensions: 500
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 533248662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -