Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_G09
         (761 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54SP2 Cluster: Actin-binding protein; n=2; Dictyosteli...    38   0.36 
UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis thalian...    36   0.83 
UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyosteli...    36   1.4  
UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces cap...    36   1.4  
UniRef50_O23462 Cluster: Extensin like protein; n=2; Arabidopsis...    35   2.5  
UniRef50_UPI0000E48C31 Cluster: PREDICTED: hypothetical protein;...    34   3.3  
UniRef50_A0BLV2 Cluster: Chromosome undetermined scaffold_115, w...    34   3.3  
UniRef50_UPI0000E4896A Cluster: PREDICTED: similar to CG33556-PA...    34   4.4  

>UniRef50_Q54SP2 Cluster: Actin-binding protein; n=2; Dictyostelium
           discoideum|Rep: Actin-binding protein - Dictyostelium
           discoideum AX4
          Length = 1126

 Score = 37.5 bits (83), Expect = 0.36
 Identities = 21/57 (36%), Positives = 22/57 (38%)
 Frame = -1

Query: 482 PPPPXKKXXSPPXXGGXXFFXXXXXFXXKXXXPPXXXGGGXFFSPPXXXXGGXPPPP 312
           PPPP     +PP  GG                PP   GGG    PP    GG PPPP
Sbjct: 545 PPPPPPPPPAPPVSGGGP--------PPPPPPPPPSSGGGPPPPPPPPSSGGPPPPP 593


>UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis
            thaliana|Rep: Gb|AAD23008.1 - Arabidopsis thaliana
            (Mouse-ear cress)
          Length = 1289

 Score = 36.3 bits (80), Expect = 0.83
 Identities = 25/80 (31%), Positives = 25/80 (31%)
 Frame = -1

Query: 482  PPPPXKKXXSPPXXGGXXFFXXXXXFXXKXXXPPXXXGGGXFFSPPXXXXGGXPPPPLFL 303
            PPPP      PP  GG         F      PP    GG    PP    GG PPPP   
Sbjct: 1049 PPPPPP----PPMHGGAPPPPPPPMFGGAQPPPPPPMRGGAPPPPPPPMRGGAPPPPPPP 1104

Query: 302  XXXXFXPPXXXXQXGXGQXP 243
                  PP      G    P
Sbjct: 1105 MRGGAPPPPPPPMHGGAPPP 1124



 Score = 35.1 bits (77), Expect = 1.9
 Identities = 20/57 (35%), Positives = 20/57 (35%)
 Frame = -1

Query: 482  PPPPXKKXXSPPXXGGXXFFXXXXXFXXKXXXPPXXXGGGXFFSPPXXXXGGXPPPP 312
            PPPP     SPP      F             PP   GG     PP    GG PPPP
Sbjct: 985  PPPPPPSYGSPPPPPPPPFSHVSSI--PPPPPPPPMHGGAPPPPPPPPMHGGAPPPP 1039


>UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyostelium
           discoideum|Rep: Actin-binding protein - Dictyostelium
           discoideum AX4
          Length = 1220

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 23/69 (33%), Positives = 24/69 (34%)
 Frame = -1

Query: 485 TPPPPXKKXXSPPXXGGXXFFXXXXXFXXKXXXPPXXXGGGXFFSPPXXXXGGXPPPPLF 306
           TPPP       PP  GG                PP   GGG    PP    GG PPPP  
Sbjct: 576 TPPPAPPAPPPPPMMGGGP---------PPPPPPPMMGGGGPPPPPPPPMMGGGPPPPPP 626

Query: 305 LXXXXFXPP 279
           +      PP
Sbjct: 627 MGGKGGPPP 635



 Score = 33.5 bits (73), Expect = 5.8
 Identities = 19/57 (33%), Positives = 19/57 (33%)
 Frame = -1

Query: 482 PPPPXKKXXSPPXXGGXXFFXXXXXFXXKXXXPPXXXGGGXFFSPPXXXXGGXPPPP 312
           PPPP      PP                    PP   GGG    PP    GG PPPP
Sbjct: 584 PPPPPMMGGGPPPPPPPPMMGGGGP---PPPPPPPMMGGGPPPPPPMGGKGGPPPPP 637


>UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 757

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 22/68 (32%), Positives = 23/68 (33%)
 Frame = +1

Query: 280 GGXXXXXXKKRGGGGXPPXXXXGGEKKXPPPXXXGGXXFXFXKXXXXXKKXXPPXXGGDX 459
           GG         GGGG PP    GG     PP   GG      +         PP  GG  
Sbjct: 397 GGGGGGGGPPGGGGGGPPGSGGGGGGGGGPPEGGGGSDGAPGRGGGGGGGGGPPGGGGGG 456

Query: 460 XFFXGGGG 483
               GGGG
Sbjct: 457 GGPPGGGG 464


>UniRef50_O23462 Cluster: Extensin like protein; n=2; Arabidopsis
           thaliana|Rep: Extensin like protein - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 164

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
 Frame = -3

Query: 483 PPPPPKKXXIXPP---RGGGXFFXXXXXFXKXKXXPPXXXXGGGFFFPP 346
           PPP P      PP    GGG ++            PP     GG+++PP
Sbjct: 57  PPPSPTTTACPPPPSSSGGGPYYYYPPASQSGSYRPPPSSSSGGYYYPP 105


>UniRef50_UPI0000E48C31 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 191

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 18/57 (31%), Positives = 19/57 (33%)
 Frame = -1

Query: 482 PPPPXKKXXSPPXXGGXXFFXXXXXFXXKXXXPPXXXGGGXFFSPPXXXXGGXPPPP 312
           PPPP K+  SPP  G                 PP    G     PP       PPPP
Sbjct: 118 PPPPSKRAASPPPPGDGSSPPPPPPRDGSSPRPPPPRDGSSPPPPPPRDGSSPPPPP 174


>UniRef50_A0BLV2 Cluster: Chromosome undetermined scaffold_115,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_115,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1084

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 20/58 (34%), Positives = 20/58 (34%)
 Frame = -1

Query: 485 TPPPPXKKXXSPPXXGGXXFFXXXXXFXXKXXXPPXXXGGGXFFSPPXXXXGGXPPPP 312
           T PPP      PP  GG                PP    GG    PP    GG PPPP
Sbjct: 564 TAPPPPPPPPPPPPPGGS--------LTAPPPPPPPPPPGGRLPPPPPPPPGGMPPPP 613


>UniRef50_UPI0000E4896A Cluster: PREDICTED: similar to CG33556-PA;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to CG33556-PA - Strongylocentrotus purpuratus
          Length = 1472

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 23/68 (33%), Positives = 23/68 (33%)
 Frame = -1

Query: 482 PPPPXKKXXSPPXXGGXXFFXXXXXFXXKXXXPPXXXGGGXFFSPPXXXXGGXPPPPLFL 303
           PPPP      PP  GG         F      PP   GG     PP    GG  PPP F 
Sbjct: 454 PPPPP-----PPGMGGAPPPPPPPPFPGGVPPPPPLPGGAPPPPPPPPFPGGGVPPPPFP 508

Query: 302 XXXXFXPP 279
                 PP
Sbjct: 509 GGGPPPPP 516


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,164,822
Number of Sequences: 1657284
Number of extensions: 7537403
Number of successful extensions: 24242
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16308
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)