Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_G09
         (761 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776     31   1.3  
07_03_0600 + 19866757-19867218,19867920-19868429                       29   3.1  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   4.0  
11_06_0652 - 25906001-25906237,25906345-25906830                       29   5.3  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.3  
01_06_1377 + 36764461-36765339                                         29   5.3  
11_06_0188 + 21036465-21036627,21036735-21036883,21037369-210374...    28   7.1  
01_01_0595 - 4430738-4430785,4430904-4432679                           28   7.1  
07_03_0698 - 20765305-20768526                                         28   9.3  

>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
          Length = 429

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/46 (34%), Positives = 17/46 (36%)
 Frame = -3

Query: 483 PPPPPKKXXIXPPRGGGXFFXXXXXFXKXKXXPPXXXXGGGFFFPP 346
           P PPP    + PPRGGG        F      PP     G    PP
Sbjct: 235 PFPPPSLPGVGPPRGGGAIPGLPAGFPFLLRPPPPLPVPGVICRPP 280


>07_03_0600 + 19866757-19867218,19867920-19868429
          Length = 323

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 386 PPXXXGGGXFFSPPXXXXGGXPPPP 312
           PP    GG   +PP     G PPPP
Sbjct: 5   PPPTMNGGHHAAPPPPQVSGAPPPP 29


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 310 RGGGGXPPXXXXGGEK-KXPPP 372
           RGGGG PP    GG + + PPP
Sbjct: 379 RGGGGPPPPALPGGPRARGPPP 400


>11_06_0652 - 25906001-25906237,25906345-25906830
          Length = 240

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -3

Query: 525 GGGXXXXXXKKXXXPPPPPKKXXIXPPRGGG 433
           G G      KK   PPPPP++    P  G G
Sbjct: 191 GKGGKRRRGKKAAGPPPPPQQPQFRPRAGAG 221


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 18/57 (31%), Positives = 18/57 (31%)
 Frame = -1

Query: 482 PPPPXKKXXSPPXXGGXXFFXXXXXFXXKXXXPPXXXGGGXFFSPPXXXXGGXPPPP 312
           PPPP K    PP   G                PP          PP    GG PPPP
Sbjct: 328 PPPPPKAAPPPPPPKGPP---PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381


>01_06_1377 + 36764461-36765339
          Length = 292

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/45 (26%), Positives = 16/45 (35%)
 Frame = -2

Query: 484 PPPPPXKXKXXPPXXGGXFFFXXXXFFXXKXXPPXXXXGGGXFFP 350
           PPPPP      PP  G   ++    ++     PP      G   P
Sbjct: 174 PPPPPAYSAPPPPQYGSEQYYRSGGYYSAPPPPPQYEYTAGPSAP 218


>11_06_0188 +
           21036465-21036627,21036735-21036883,21037369-21037484,
           21037939-21038101
          Length = 196

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +2

Query: 437 PPRGGXXFXFXGGGGG 484
           PPRGG    F GGGGG
Sbjct: 3   PPRGGGGGRFGGGGGG 18


>01_01_0595 - 4430738-4430785,4430904-4432679
          Length = 607

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 495 KXXXPPPPPKKXXIXPPRGG 436
           K   PPPPP +  + P RGG
Sbjct: 464 KGNKPPPPPPRCCLCPARGG 483


>07_03_0698 - 20765305-20768526
          Length = 1073

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 328 PPXXXXGGEKKXPPPXXXGG 387
           PP    GG+K+ PPP   GG
Sbjct: 312 PPLQSEGGDKEQPPPLQSGG 331


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,202,460
Number of Sequences: 37544
Number of extensions: 351564
Number of successful extensions: 1640
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)