Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F24
(899 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D88213-1|BAA19001.1| 729|Homo sapiens retina-specific amine oxi... 35 0.46
DQ060035-1|AAY43129.1| 756|Homo sapiens amine oxidase, copper c... 35 0.46
BC142641-1|AAI42642.1| 756|Homo sapiens amine oxidase, copper c... 35 0.46
AF081363-1|AAD39345.1| 756|Homo sapiens retina copper-containin... 35 0.46
AB012943-2|BAA32590.1| 756|Homo sapiens retina-specific amine o... 35 0.46
AB012943-1|BAA32589.1| 729|Homo sapiens retina-specific amine o... 35 0.46
BC024157-1|AAH24157.1| 779|Homo sapiens pleckstrin homology dom... 32 3.3
AY007233-1|AAG01896.1| 779|Homo sapiens phosphoinositol 3-phosp... 32 3.3
AB208908-1|BAD92145.1| 382|Homo sapiens Pleckstrin homology dom... 32 3.3
BC001653-1|AAH01653.1| 600|Homo sapiens melanophilin protein. 31 7.5
X76132-1|CAA53735.1| 1447|Homo sapiens tumour suppressor protein. 30 10.0
>D88213-1|BAA19001.1| 729|Homo sapiens retina-specific amine
oxidase protein.
Length = 729
Score = 34.7 bits (76), Expect = 0.46
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 494 LHQLGVEFFLGLDSWS-AHWNMHQVAILGHYHLELKEYHLEWFS 366
LH +G+E L + AHW + QV LGHY+ +L + E+ S
Sbjct: 234 LHPVGLELLLDHRALDPAHWTVQQVFYLGHYYADLGQLEREFKS 277
>DQ060035-1|AAY43129.1| 756|Homo sapiens amine oxidase, copper
containing 2 (retina-specific) protein.
Length = 756
Score = 34.7 bits (76), Expect = 0.46
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 494 LHQLGVEFFLGLDSWS-AHWNMHQVAILGHYHLELKEYHLEWFS 366
LH +G+E L + AHW + QV LGHY+ +L + E+ S
Sbjct: 234 LHPVGLELLLDHRALDPAHWTVQQVFYLGHYYADLGQLEREFKS 277
>BC142641-1|AAI42642.1| 756|Homo sapiens amine oxidase, copper
containing 2 (retina-specific) protein.
Length = 756
Score = 34.7 bits (76), Expect = 0.46
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 494 LHQLGVEFFLGLDSWS-AHWNMHQVAILGHYHLELKEYHLEWFS 366
LH +G+E L + AHW + QV LGHY+ +L + E+ S
Sbjct: 234 LHPVGLELLLDHRALDPAHWTVQQVFYLGHYYADLGQLEREFKS 277
>AF081363-1|AAD39345.1| 756|Homo sapiens retina copper-containing
monoamine oxidase protein.
Length = 756
Score = 34.7 bits (76), Expect = 0.46
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 494 LHQLGVEFFLGLDSWS-AHWNMHQVAILGHYHLELKEYHLEWFS 366
LH +G+E L + AHW + QV LGHY+ +L + E+ S
Sbjct: 234 LHPVGLELLLDHRALDPAHWTVQQVFYLGHYYADLGQLEREFKS 277
>AB012943-2|BAA32590.1| 756|Homo sapiens retina-specific amine
oxidase protein.
Length = 756
Score = 34.7 bits (76), Expect = 0.46
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 494 LHQLGVEFFLGLDSWS-AHWNMHQVAILGHYHLELKEYHLEWFS 366
LH +G+E L + AHW + QV LGHY+ +L + E+ S
Sbjct: 234 LHPVGLELLLDHRALDPAHWTVQQVFYLGHYYADLGQLEREFKS 277
>AB012943-1|BAA32589.1| 729|Homo sapiens retina-specific amine
oxidase protein.
Length = 729
Score = 34.7 bits (76), Expect = 0.46
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 494 LHQLGVEFFLGLDSWS-AHWNMHQVAILGHYHLELKEYHLEWFS 366
LH +G+E L + AHW + QV LGHY+ +L + E+ S
Sbjct: 234 LHPVGLELLLDHRALDPAHWTVQQVFYLGHYYADLGQLEREFKS 277
>BC024157-1|AAH24157.1| 779|Homo sapiens pleckstrin homology domain
containing, family A (phosphoinositide binding speci
protein.
Length = 779
Score = 31.9 bits (69), Expect = 3.3
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Frame = +2
Query: 143 PPASSSSIAAQEKPREELPTRALRP-------RSTLTRKTTNALSSQSVGSGGSAKRKTA 301
PPA S A +P L +RP R TL+R T S GG R
Sbjct: 256 PPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQRQTLSRPPTPRRGPPSEAGGGKPPRSPQ 315
Query: 302 LNKNQIPKTNVHSGGDGCLLL 364
+ +Q P+T HSG L L
Sbjct: 316 -HWSQEPRTQAHSGSPTYLQL 335
>AY007233-1|AAG01896.1| 779|Homo sapiens phosphoinositol
3-phosphate binding protein-1 protein.
Length = 779
Score = 31.9 bits (69), Expect = 3.3
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Frame = +2
Query: 143 PPASSSSIAAQEKPREELPTRALRP-------RSTLTRKTTNALSSQSVGSGGSAKRKTA 301
PPA S A +P L +RP R TL+R T S GG R
Sbjct: 256 PPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQRQTLSRPPTPRRGPPSEAGGGKPPRSPQ 315
Query: 302 LNKNQIPKTNVHSGGDGCLLL 364
+ +Q P+T HSG L L
Sbjct: 316 -HWSQEPRTQAHSGSPTYLQL 335
>AB208908-1|BAD92145.1| 382|Homo sapiens Pleckstrin homology
domain-containing protein family A member 4 variant
protein.
Length = 382
Score = 31.9 bits (69), Expect = 3.3
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Frame = +2
Query: 143 PPASSSSIAAQEKPREELPTRALRP-------RSTLTRKTTNALSSQSVGSGGSAKRKTA 301
PPA S A +P L +RP R TL+R T S GG R
Sbjct: 226 PPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQRQTLSRPPTPRRGPPSEAGGGKPPRSPQ 285
Query: 302 LNKNQIPKTNVHSGGDGCLLL 364
+ +Q P+T HSG L L
Sbjct: 286 -HWSQEPRTQAHSGSPTYLQL 305
>BC001653-1|AAH01653.1| 600|Homo sapiens melanophilin protein.
Length = 600
Score = 30.7 bits (66), Expect = 7.5
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 2/145 (1%)
Frame = +2
Query: 92 RMSQIAEXQKLEXSDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSVG 271
R +AE S + +++++ + E+LP + L T ++ A +
Sbjct: 269 RHGALAELCPPGGSHRMALGTAAALGSNVIRNEQLPLQYLADVDTSDEESIRA---HVMA 325
Query: 272 SGGSAKRKTALNKNQIPKTNVHSGGDGCLL--LERTTLSGIPLIQDDNDQGWRPDAYSSE 445
S S +R A +++QI + N H CLL LE T +P + G R +A E
Sbjct: 326 SHHSKRRGRASSESQIFELNKHISAVECLLTYLENTV---VPPLAKGLGAGVRTEADVEE 382
Query: 446 HSMSQDQGKIQHQVDEEALSNEDVE 520
++ + ++ V ++ S+E+ E
Sbjct: 383 EALRRKLEELTSNVSDQETSSEEEE 407
>X76132-1|CAA53735.1| 1447|Homo sapiens tumour suppressor protein.
Length = 1447
Score = 30.3 bits (65), Expect = 10.0
Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
Frame = +2
Query: 86 ADRMSQIAEXQKLEXSDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQS 265
A R ++E + LPP+ +++E P +PT +RP L R N L
Sbjct: 1295 AGRSQSVSEGPTTQQPPMLPPSQPEHSSSEEAPSRTIPTACVRPTHPL-RSFANPLLPPP 1353
Query: 266 VGSGGSAKRKTALNKN---QIPKTNVHSGGDGCLLLERTTL--SGIPLIQDDNDQGWRP 427
+ + T L +PKT+V + G R+ L +P + +++ +P
Sbjct: 1354 MSAIEPKVPYTPLLSQPGPTLPKTHVKTASLGLAGKARSPLLPVSVPTAPEVSEESHKP 1412
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,100,439
Number of Sequences: 237096
Number of extensions: 1692585
Number of successful extensions: 3757
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3754
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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