Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F21
         (895 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    29   0.049
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    29   0.049
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    27   0.26 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   1.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   4.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 29.1 bits (62), Expect = 0.049
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +3

Query: 414  LVLYLVEVLAHVCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIKHKGEI 572
            L L  +  L  +C     Y C+VC+  +  +  KI +  L +K   +   GE+
Sbjct: 993  LHLVYISFLGIICAADVFYICHVCYATIQEVRAKIYFFYL-VKFYKVSKSGEL 1044


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 29.1 bits (62), Expect = 0.049
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +3

Query: 414 LVLYLVEVLAHVCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIKHKGEI 572
           L L  +  L  +C     Y C+VC+  +  +  KI +  L +K   +   GE+
Sbjct: 274 LHLVYISFLGIICAADVFYICHVCYATIQEVRAKIYFFYL-VKFYKVSKSGEL 325


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3

Query: 665 ISRIIWNIWICVHCDIPWSKNSSMGCSAFTINLSFVFDNIHFYW*FTV 522
           ++ +IW I+   H  I WS  S+  C  F I L+  +  I     FT+
Sbjct: 241 LTYLIWTIYEMYHLAILWSCTST-NCPRFLIMLALSYTVIQEVMLFTI 287


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 181 YIILYKYHIFLCVDIVLYCIVMFKWCY 261
           +II   + +F CV I+L CI  F + +
Sbjct: 219 FIIFTIHLLFYCVLIILLCIYYFYYAF 245


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 184 IILYKYHIFLCVDIVLYCIVMFKWCYKINNLTLNYH 291
           II   + I L + ++LYCI+          L LN H
Sbjct: 241 IIFLFFIIPLIILLILYCIIAKNLMSNAATLVLNKH 276


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 618  DVTVYTYPDIPDYPTDGKGC 677
            D+  YT   +P+ P D   C
Sbjct: 1090 DIKAYTAEGVPEQPPDKATC 1109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,324
Number of Sequences: 336
Number of extensions: 3938
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)