BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F21
(895 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-4379|AAF56893.2| 327|Drosophila melanogaster CG2006-PA... 99 4e-21
>AE014297-4379|AAF56893.2| 327|Drosophila melanogaster CG2006-PA
protein.
Length = 327
Score = 99 bits (238), Expect = 4e-21
Identities = 51/125 (40%), Positives = 77/125 (61%)
Frame = +3
Query: 447 VCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIKHKGEINGKSTAAHAAVLAPRDVT 626
+C +SR +FCY C +PV LE +P +LP++VDIIKHK EI+GKS+A HAAVLAP V
Sbjct: 38 LCNRSRKFFCYSCCVPVGELEELLPRLELPLQVDIIKHKKEIDGKSSAVHAAVLAPAHVR 97
Query: 627 VYTYPDIPDYPTDGKGCFVVSWS*GKICARLIHQQQNQPSYSEIMLSQLPVGFNVGTLXK 806
++T+PDIPDY + G ++ S + + + Q + LP G ++GT+ +
Sbjct: 98 IHTFPDIPDYREEA-GVVLIFPSATALAVPQLFARNVQLQIGDNY--GLPKGHHMGTMLR 154
Query: 807 KIVPE 821
+ + E
Sbjct: 155 RRMDE 159
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,966,036
Number of Sequences: 53049
Number of extensions: 625523
Number of successful extensions: 1359
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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