Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F20
         (885 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11; Ditrys...    89   1e-16
UniRef50_Q6K6D6 Cluster: Putative uncharacterized protein P0654A...    40   0.084
UniRef50_Q9NBA3 Cluster: Transcription factor Pax-B1; n=2; Clado...    40   0.11 
UniRef50_A7PXL8 Cluster: Chromosome chr12 scaffold_36, whole gen...    34   4.2  
UniRef50_Q9XDC5 Cluster: Protective antigen; n=5; Streptococcus|...    33   7.3  
UniRef50_Q3JRZ2 Cluster: Cyd operon protein YbgT, putative; n=9;...    33   9.7  
UniRef50_Q8NAJ5 Cluster: CDNA FLJ35258 fis, clone PROST2004146; ...    33   9.7  
UniRef50_Q5BFZ1 Cluster: Putative uncharacterized protein; n=2; ...    33   9.7  

>UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11;
           Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 189

 Score = 89.4 bits (212), Expect = 1e-16
 Identities = 52/94 (55%), Positives = 63/94 (67%)
 Frame = +3

Query: 249 QQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXSGTSRPVPLAKSNTFDLGNVG 428
           +QFNSL  SK+ QDF+KA KDGS+SVLQQL+AF+ SLQ +                    
Sbjct: 48  EQFNSLVNSKNTQDFNKALKDGSDSVLQQLSAFSSSLQGA-------------------- 87

Query: 429 TLPQLGDANGKAKEALEQSRQNIERTAEELRKAH 530
               + DANGKAKEALEQ+RQN+E+TAEELRKAH
Sbjct: 88  ----ISDANGKAKEALEQARQNVEKTAEELRKAH 117



 Score = 60.1 bits (139), Expect = 7e-08
 Identities = 29/54 (53%), Positives = 37/54 (68%)
 Frame = +2

Query: 539 VEKNATALREKLQAAVQNTVQESXKXXXKVSSNVQETNEKXGAQXXGXYDXFAK 700
           VEK A A ++KLQAAVQ TVQES K   +V+SN++ETN+K   +    YD F K
Sbjct: 120 VEKEANAFKDKLQAAVQTTVQESQKLAKEVASNMEETNKKLAPKIKQAYDDFVK 173



 Score = 45.2 bits (102), Expect = 0.002
 Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
 Frame = +1

Query: 118 MAAKFVV-LFACIALAQGAMVRRDAP---DFFKDIEHHTKXVP*DFRN--NSLTRSPSQR 279
           MAAKFVV L AC+AL+  AMVRRDAP   + F+++E H K     F    NSL  S + +
Sbjct: 1   MAAKFVVVLAACVALSHSAMVRRDAPAGGNAFEEMEKHAKEFQKTFSEQFNSLVNSKNTQ 60

Query: 280 THRTSARLG 306
               + + G
Sbjct: 61  DFNKALKDG 69


>UniRef50_Q6K6D6 Cluster: Putative uncharacterized protein
           P0654A08.23; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0654A08.23 - Oryza sativa subsp. japonica (Rice)
          Length = 141

 Score = 39.9 bits (89), Expect = 0.084
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -1

Query: 513 PRPCARCSASTVPKPPWPCRSRLRAVEESQHYLGRTYLIWPREQA 379
           PRPC +CS+S +P  P    + + A E   +YL R    WP+E A
Sbjct: 32  PRPCHQCSSSPLPSSPHGDFAAVAAAEVHHNYLRRRCYRWPQEPA 76


>UniRef50_Q9NBA3 Cluster: Transcription factor Pax-B1; n=2;
           Cladonema californicum|Rep: Transcription factor Pax-B1
           - Cladonema californicum
          Length = 689

 Score = 39.5 bits (88), Expect = 0.11
 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
 Frame = +3

Query: 222 QGSSIRL*KQQFNSLTKSKDAQDFSKAWKDGSESVLQQLN--AFAKSLQXSGTSRPVPLA 395
           + SS  + +  F++L  S   ++  K     S+ V+  +N  +F ++LQ     +P P +
Sbjct: 363 ENSSSSINESVFHTLQNSTSIENIVKTVSPTSKIVVNNINPTSFERTLQDDEFYQPQPAS 422

Query: 396 KSNTFDLGNVGTLPQLGDANGKAKEALEQSRQNIERTAEELRKA 527
             +T D+ +   LP  GD N KA   +  +  N ++  +EL KA
Sbjct: 423 MVSTIDMASFSMLPAFGD-NKKASRRVRTTFSNEQK--KELEKA 463


>UniRef50_A7PXL8 Cluster: Chromosome chr12 scaffold_36, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr12 scaffold_36, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 2300

 Score = 34.3 bits (75), Expect = 4.2
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
 Frame = +3

Query: 105 STVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*KQQFNSLT--KSK 278
           S+ +HGR++ S  R+ R G  SDG+ R+     G    H GS IR      N     +  
Sbjct: 249 SSKNHGRELVSRTRMKRYGTDSDGSERKH---HGEYGDHMGSKIRKLSDDSNRTVHLEHY 305

Query: 279 DAQDFSKAWKDGSESVLQQLNAFAKSLQXSGTSRPV 386
             +   +++++ S S +   + F+     S  S  V
Sbjct: 306 SRRSMERSYRNSSSSRISSSDRFSSRHYESSFSSKV 341


>UniRef50_Q9XDC5 Cluster: Protective antigen; n=5;
           Streptococcus|Rep: Protective antigen - Streptococcus
           pyogenes
          Length = 570

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 27/95 (28%), Positives = 46/95 (48%)
 Frame = +3

Query: 246 KQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXSGTSRPVPLAKSNTFDLGNV 425
           K++   L K KDA D + A    + + L++  A A   + +   + V  AK+   DL   
Sbjct: 389 KREIAELEKQKDASDKALAESQANVAELEKQKA-ASDAKVAELEKEVEAAKAEVADLK-- 445

Query: 426 GTLPQLGDANGKAKEALEQSRQNIERTAEELRKAH 530
               QL     +  EA+++ ++ +E   EEL+KAH
Sbjct: 446 ---AQLAKKEEEL-EAVKKEKEALEAKIEELKKAH 476


>UniRef50_Q3JRZ2 Cluster: Cyd operon protein YbgT, putative; n=9;
           Burkholderia|Rep: Cyd operon protein YbgT, putative -
           Burkholderia pseudomallei (strain 1710b)
          Length = 526

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = -1

Query: 510 RPCARCSASTVPKPPWPCRSR 448
           RP  RCS ST P+PP P RSR
Sbjct: 26  RPTKRCSCSTRPRPPRPKRSR 46


>UniRef50_Q8NAJ5 Cluster: CDNA FLJ35258 fis, clone PROST2004146;
           n=1; Homo sapiens|Rep: CDNA FLJ35258 fis, clone
           PROST2004146 - Homo sapiens (Human)
          Length = 142

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 582 AACSFSRRAVAFFSTXRGGPCGAPRPCARCSASTVPKPPWPCRS 451
           +AC++    +   +  R G  GA  PC   +A T   PPWP  S
Sbjct: 14  SACAWPMAPMGALAAWRSGMAGAGAPCV-MTAGTCAMPPWPAGS 56


>UniRef50_Q5BFZ1 Cluster: Putative uncharacterized protein; n=2;
            Emericella nidulans|Rep: Putative uncharacterized protein
            - Emericella nidulans (Aspergillus nidulans)
          Length = 1363

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 290  LQQGLEGRLRVRAATAQRLRQESPXERYVSACSLGQIK 403
            L+ G +G L V       LR+ SP   Y+SAC  GQI+
Sbjct: 1198 LRDGKDGPLTVANLLEMNLREYSPFLAYLSACGTGQIR 1235


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,350,738
Number of Sequences: 1657284
Number of extensions: 10964253
Number of successful extensions: 41881
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 39902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41848
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)