Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F20
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   5.6  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   5.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.7  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 541 DVQGWALRSSSAVRSMFCLDCSKASLALPFASPSCGRV 428
           D+ GW+    +   S+  LD     +AL      CGRV
Sbjct: 276 DIFGWSFLLFTLYSSLLLLDYVSCVVALIILILQCGRV 313


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 541 DVQGWALRSSSAVRSMFCLDCSKASLALPFASPSCGRV 428
           D+ GW+    +   S+  LD     +AL      CGRV
Sbjct: 202 DIFGWSFLLFTLYSSLLLLDYVSCVVALIILILQCGRV 239


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 138 SLRLHRSGPRSDGATRRS-RLLQGHR 212
           ++RL R+GPR++ A     R++  HR
Sbjct: 179 NIRLKRAGPRTESAVYEPVRIMGVHR 204


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 178 RRDAPDFFKDIEH 216
           RR AP  F+DI+H
Sbjct: 84  RRKAPQSFEDIQH 96


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 408 TYLIWPREQAETYRSXGDSW 349
           T L+W  EQ   +   G+ W
Sbjct: 811 TTLVWDNEQQVPFAYRGNQW 830


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 460 LPFASPSCGRVPTLPRSNVFDLAKGT 383
           L FAS S G V     ++ F++ +GT
Sbjct: 264 LRFASESRGSVAKFTAADFFEIDRGT 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,335
Number of Sequences: 336
Number of extensions: 2426
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)