Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F20
         (885 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1986|AAS65029.1| 3135|Drosophila melanogaster CG18331-P...    32   1.2  
M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 cha...    31   1.6  
M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein ( D.me...    31   1.6  
BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p pro...    31   1.6  
AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p pro...    31   1.6  
AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB...    31   1.6  
AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA...    31   1.6  

>AE014296-1986|AAS65029.1| 3135|Drosophila melanogaster CG18331-PA
            protein.
          Length = 3135

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
 Frame = +3

Query: 57   SSVFAVLVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSS- 233
            S  ++ L++ S++   +    G  +  S+ +   G +SD +  +     G  +  QGS  
Sbjct: 2972 SGSWSKLIKRSTSSDETNASDGPSLSGSI-VGAGGSQSDESWSQRSGFSGDSSSAQGSPD 3030

Query: 234  --IRL*KQQFNSLTKSKDAQDFSKAWKDGSESVLQ-QLNAFAKSLQXSGTSRPVPLAKSN 404
              IRL ++Q  +  +S+++  ++++   GSES+    + A   SL+ SG+S  V    + 
Sbjct: 3031 IRIRLGREQSGNDAQSQNSNSWTQSATQGSESLANGAITANGLSLEGSGSSGGV----AT 3086

Query: 405  TFDLGNVGTLPQ 440
            T   G+VG   Q
Sbjct: 3087 TIPGGSVGVTGQ 3098


>M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 chain
            protein.
          Length = 1788

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 423  VGTLPQLGDANGKAKEALEQSRQNIERTAEELRK 524
            V +L    ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1598 VESLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631


>M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein (
            D.melanogaster lamininB1 subunit mRNA, complete cds. ).
          Length = 1788

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 423  VGTLPQLGDANGKAKEALEQSRQNIERTAEELRK 524
            V +L    ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1598 VESLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631


>BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p protein.
          Length = 1296

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 423  VGTLPQLGDANGKAKEALEQSRQNIERTAEELRK 524
            V +L    ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1106 VESLAAADESQGKAKDAIQQANSNIELAGQDLEK 1139


>AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p
           protein.
          Length = 1026

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 423 VGTLPQLGDANGKAKEALEQSRQNIERTAEELRK 524
           V +L    ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 836 VESLAAADESQGKAKDAIQQANSNIELAGQDLEK 869


>AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB,
            isoform B protein.
          Length = 1788

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 423  VGTLPQLGDANGKAKEALEQSRQNIERTAEELRK 524
            V +L    ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1598 VESLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631


>AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA,
            isoform A protein.
          Length = 1788

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 423  VGTLPQLGDANGKAKEALEQSRQNIERTAEELRK 524
            V +L    ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1598 VESLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,071,901
Number of Sequences: 53049
Number of extensions: 527480
Number of successful extensions: 2287
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2284
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)