Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F20
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99283-5|CAE46680.1|  308|Caenorhabditis elegans Hypothetical pr...    32   0.63 
Z99283-4|CAB16534.1|  342|Caenorhabditis elegans Hypothetical pr...    32   0.63 
AC006630-3|AAK68325.1|  257|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z99283-5|CAE46680.1|  308|Caenorhabditis elegans Hypothetical
           protein Y70C5C.6b protein.
          Length = 308

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -3

Query: 424 TLPRSNVFDLAKGTGRDVPLXWRLLAKALSCCSTDSEPSFQALLKS 287
           +L   N+F+L     RD+ L WR+++KA        +   QALL++
Sbjct: 89  SLNNCNIFELTSFVLRDLELTWRMVSKAFPTVEVLEDRDRQALLRN 134


>Z99283-4|CAB16534.1|  342|Caenorhabditis elegans Hypothetical
           protein Y70C5C.6a protein.
          Length = 342

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -3

Query: 424 TLPRSNVFDLAKGTGRDVPLXWRLLAKALSCCSTDSEPSFQALLKS 287
           +L   N+F+L     RD+ L WR+++KA        +   QALL++
Sbjct: 123 SLNNCNIFELTSFVLRDLELTWRMVSKAFPTVEVLEDRDRQALLRN 168


>AC006630-3|AAK68325.1|  257|Caenorhabditis elegans Hypothetical
           protein F14H12.3 protein.
          Length = 257

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
 Frame = -1

Query: 609 WDSCTVFCTAACSFSRRAVAFFSTXRGGPCGAPRPC---ARCSASTVPKPPWPCRS 451
           W +C+V C +  S +R       +   G      PC   A C  +T  +PP PC +
Sbjct: 148 WSACSVTCGSGGSITRSRQCSCGSGCTGGSVEQEPCPQQAACPCTTCNQPPPPCNT 203


>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 531 GGPCGAPRPCARCSASTVPKPP 466
           GG CG P PC   + + V  PP
Sbjct: 65  GGGCGGPAPCGGAAPAYVAPPP 86


>U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical
           protein T09D3.3 protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 513 PRPCARCSASTVPKPPWPCRSRLRAVEESQHY 418
           P P A+CS +  P     C +RL+ + ESQ Y
Sbjct: 272 PAPQAQCSPACQPHCSQQCVARLQYMHESQFY 303


>AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical
           protein F56B3.8 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 150 HRSGPRSDGATRRSRLLQGHRTPHQGSSIRL 242
           HR GP   GAT   R+L+  R P++   I L
Sbjct: 92  HRRGPADQGATYDERILEIRRDPNRTCHIAL 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,342,596
Number of Sequences: 27780
Number of extensions: 249843
Number of successful extensions: 911
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)