Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F18
(916 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC054868-1|AAH54868.1| 178|Homo sapiens nucleophosmin/nucleopla... 41 0.005
BC041067-1|AAH41067.1| 178|Homo sapiens nucleophosmin/nucleopla... 41 0.005
AY049737-1|AAL12172.1| 178|Homo sapiens nucleophosmin/nucleopla... 41 0.005
AF081280-1|AAC31609.1| 178|Homo sapiens nucleoplasmin-3 protein. 41 0.005
AF079325-1|AAD51496.1| 178|Homo sapiens nucleophosmin/nucleopla... 37 0.089
BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domai... 31 4.4
AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein pr... 31 4.4
AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein. 31 4.4
AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein. 31 4.4
BC107478-1|AAI07479.1| 416|Homo sapiens C6orf205 protein protein. 31 7.7
BC105737-1|AAI05738.1| 566|Homo sapiens chromosome 6 open readi... 31 7.7
BC105735-1|AAI05736.1| 566|Homo sapiens chromosome 6 open readi... 31 7.7
AL669830-8|CAI18008.1| 566|Homo sapiens chromosome 6 open readi... 31 7.7
AL663093-1|CAI17705.1| 566|Homo sapiens chromosome 6 open readi... 31 7.7
>BC054868-1|AAH54868.1| 178|Homo sapiens
nucleophosmin/nucleoplasmin, 3 protein.
Length = 178
Score = 41.1 bits (92), Expect = 0.005
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 120 IMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMS 299
+ D FF+G LS +S T+ E + + + L + L AK DE NV++V A +
Sbjct: 32 VTMDSFFFGCELSGHTRSFTFKVEEEDD--AEHVLALTMLCLTEGAK-DECNVVEVVARN 88
Query: 300 LQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVSG 413
+ + +PVA LK+ + LD PVTF L SG
Sbjct: 89 HDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSG 127
>BC041067-1|AAH41067.1| 178|Homo sapiens
nucleophosmin/nucleoplasmin, 3 protein.
Length = 178
Score = 41.1 bits (92), Expect = 0.005
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 120 IMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMS 299
+ D FF+G LS +S T+ E + + + L + L AK DE NV++V A +
Sbjct: 32 VTMDSFFFGCELSGHTRSFTFKVEEEDD--AEHVLALTMLCLTEGAK-DECNVVEVVARN 88
Query: 300 LQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVSG 413
+ + +PVA LK+ + LD PVTF L SG
Sbjct: 89 HDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSG 127
>AY049737-1|AAL12172.1| 178|Homo sapiens
nucleophosmin/nucleoplasmin 3 protein.
Length = 178
Score = 41.1 bits (92), Expect = 0.005
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 120 IMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMS 299
+ D FF+G LS +S T+ E + + + L + L AK DE NV++V A +
Sbjct: 32 VTMDSFFFGCELSGHTRSFTFKVEEEDD--AEHVLALTMLCLTEGAK-DECNVVEVVARN 88
Query: 300 LQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVSG 413
+ + +PVA LK+ + LD PVTF L SG
Sbjct: 89 HDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSG 127
>AF081280-1|AAC31609.1| 178|Homo sapiens nucleoplasmin-3 protein.
Length = 178
Score = 41.1 bits (92), Expect = 0.005
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 120 IMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMS 299
+ D FF+G LS +S T+ E + + + L + L AK DE NV++V A +
Sbjct: 32 VTMDSFFFGCELSGHTRSFTFKVEEEDD--AEHVLALTMLCLTEGAK-DECNVVEVVARN 88
Query: 300 LQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVSG 413
+ + +PVA LK+ + LD PVTF L SG
Sbjct: 89 HDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSG 127
>AF079325-1|AAD51496.1| 178|Homo sapiens
nucleophosmin/nucleoplasmin3 protein.
Length = 178
Score = 37.1 bits (82), Expect = 0.089
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 120 IMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMS 299
+ D FF+G LS +S T+ E + + + L + L AK DE V++V A +
Sbjct: 32 VTMDSFFFGCELSGHTRSFTFKVEEEDD--ADDVLALTMLCLTEGAK-DECIVVKVVARN 88
Query: 300 LQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVSG 413
+ + +PVA LK+ + LD PVTF L SG
Sbjct: 89 HDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSG 127
>BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domain
containing 14 protein.
Length = 949
Score = 31.5 bits (68), Expect = 4.4
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +3
Query: 114 EIIMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEA 293
E++ +D VT SSS +E + YP N + L GPDA E N + +++
Sbjct: 119 EVLWSDSSITSVTKSSSEVTEFISKLCQL-YPEENLEKLIPCLAGPDAFYVERNHVDLDS 177
Query: 294 MSLQEAVKLPVAVLKVGESRHVR 362
L+ LP VLK + HVR
Sbjct: 178 -GLRYLASLPSHVLK---NDHVR 196
>AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 31.5 bits (68), Expect = 4.4
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +3
Query: 114 EIIMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEA 293
E++ +D VT SSS +E + YP N + L GPDA E N + +++
Sbjct: 2 EVLWSDSSITSVTKSSSEVTEFISKLCQL-YPEENLEKLIPCLAGPDAFYVERNHVDLDS 60
Query: 294 MSLQEAVKLPVAVLKVGESRHVR 362
L+ LP VLK + HVR
Sbjct: 61 -GLRYLASLPSHVLK---NDHVR 79
>AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein.
Length = 949
Score = 31.5 bits (68), Expect = 4.4
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +3
Query: 114 EIIMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEA 293
E++ +D VT SSS +E + YP N + L GPDA E N + +++
Sbjct: 119 EVLWSDSSITSVTKSSSEVTEFISKLCQL-YPEENLEKLIPCLAGPDAFYVERNHVDLDS 177
Query: 294 MSLQEAVKLPVAVLKVGESRHVR 362
L+ LP VLK + HVR
Sbjct: 178 -GLRYLASLPSHVLK---NDHVR 196
>AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein.
Length = 910
Score = 31.5 bits (68), Expect = 4.4
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +3
Query: 114 EIIMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEA 293
E++ +D VT SSS +E + YP N + L GPDA E N + +++
Sbjct: 80 EVLWSDSSITSVTKSSSEVTEFISKLCQL-YPEENLEKLIPCLAGPDAFYVERNHVDLDS 138
Query: 294 MSLQEAVKLPVAVLKVGESRHVR 362
L+ LP VLK + HVR
Sbjct: 139 -GLRYLASLPSHVLK---NDHVR 157
>BC107478-1|AAI07479.1| 416|Homo sapiens C6orf205 protein protein.
Length = 416
Score = 30.7 bits (66), Expect = 7.7
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = -1
Query: 409 ETRVNVTGASGNSMSRRTCLDSPTFNTATGSFTASCSDMASTCITFNSSGLASGPNNA*R 230
E+ +GAS + S + S T +TAT S +++ S AST T SS +SG + A
Sbjct: 199 ESSTTSSGASTATNSGSSTTSSGT-STATNSESSTVSSGASTATTSESSTTSSGASTATN 257
Query: 229 MTSLLLRGYSAFASGSHVS 173
S + ++ A+ S S
Sbjct: 258 SESSTVSSGASTATNSESS 276
>BC105737-1|AAI05738.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 30.7 bits (66), Expect = 7.7
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = -1
Query: 409 ETRVNVTGASGNSMSRRTCLDSPTFNTATGSFTASCSDMASTCITFNSSGLASGPNNA*R 230
E+ +GAS + S + S T +TAT S +++ S AST T SS +SG + A
Sbjct: 349 ESSTTSSGASTATNSGSSTTSSGT-STATNSESSTVSSGASTATTSESSTTSSGASTATN 407
Query: 229 MTSLLLRGYSAFASGSHVS 173
S + ++ A+ S S
Sbjct: 408 SESSTVSSGASTATNSESS 426
>BC105735-1|AAI05736.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 30.7 bits (66), Expect = 7.7
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = -1
Query: 409 ETRVNVTGASGNSMSRRTCLDSPTFNTATGSFTASCSDMASTCITFNSSGLASGPNNA*R 230
E+ +GAS + S + S T +TAT S +++ S AST T SS +SG + A
Sbjct: 349 ESSTTSSGASTATNSGSSTTSSGT-STATNSESSTVSSGASTATTSESSTTSSGASTATN 407
Query: 229 MTSLLLRGYSAFASGSHVS 173
S + ++ A+ S S
Sbjct: 408 SESSTVSSGASTATNSESS 426
>AL669830-8|CAI18008.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 30.7 bits (66), Expect = 7.7
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = -1
Query: 409 ETRVNVTGASGNSMSRRTCLDSPTFNTATGSFTASCSDMASTCITFNSSGLASGPNNA*R 230
E+ +GAS + S + S T +TAT S +++ S AST T SS +SG + A
Sbjct: 349 ESSTTSSGASTATNSGSSTTSSGT-STATNSESSTVSSGASTATTSESSTTSSGASTATN 407
Query: 229 MTSLLLRGYSAFASGSHVS 173
S + ++ A+ S S
Sbjct: 408 SESSTVSSGASTATNSESS 426
>AL663093-1|CAI17705.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 30.7 bits (66), Expect = 7.7
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = -1
Query: 409 ETRVNVTGASGNSMSRRTCLDSPTFNTATGSFTASCSDMASTCITFNSSGLASGPNNA*R 230
E+ +GAS + S + S T +TAT S +++ S AST T SS +SG + A
Sbjct: 349 ESSTTSSGASTATNSGSSTTSSGT-STATNSESSTVSSGASTATTSESSTTSSGASTATN 407
Query: 229 MTSLLLRGYSAFASGSHVS 173
S + ++ A+ S S
Sbjct: 408 SESSTVSSGASTATNSESS 426
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,276,341
Number of Sequences: 237096
Number of extensions: 1345254
Number of successful extensions: 2481
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2449
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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