Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F17
(1000 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 190 5e-47
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 180 5e-44
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 145 2e-33
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 110 6e-23
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 99 2e-19
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 96 1e-18
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 93 8e-18
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 88 4e-16
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 83 8e-15
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 73 9e-12
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 72 3e-11
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 66 1e-09
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 60 1e-07
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 55 2e-06
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 54 6e-06
UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microsci... 54 6e-06
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 54 8e-06
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 53 1e-05
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 52 2e-05
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 49 2e-04
UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28; Bacteri... 49 2e-04
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 49 2e-04
UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellula... 48 3e-04
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 48 4e-04
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 48 4e-04
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 48 5e-04
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 48 5e-04
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 47 7e-04
UniRef50_P38120 Cluster: 37S ribosomal protein S9, mitochondrial... 47 9e-04
UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellul... 46 0.001
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 46 0.002
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellula... 44 0.005
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 44 0.008
UniRef50_Q9ZDU0 Cluster: 30S ribosomal protein S9; n=29; Proteob... 43 0.011
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 43 0.014
UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial... 42 0.025
UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellula... 42 0.025
UniRef50_O94150 Cluster: 40S ribosomal protein S9, mitochondrial... 42 0.033
UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;... 41 0.043
UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9; Bacteria... 41 0.043
UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellula... 41 0.057
UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66; Bacteri... 40 0.100
UniRef50_Q9AR08 Cluster: 9S ribosomal protein; n=4; Poaceae|Rep:... 40 0.13
UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular... 40 0.13
UniRef50_Q2GXL6 Cluster: Putative uncharacterized protein; n=1; ... 39 0.17
UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p - ... 39 0.23
UniRef50_Q7P3E8 Cluster: 30S ribosomal protein S9; n=1; Fusobact... 38 0.31
UniRef50_Q1JSU2 Cluster: Ribosomal protein s9, putative; n=1; To... 38 0.31
UniRef50_Q7S7R6 Cluster: 40S ribosomal protein S9, mitochondrial... 38 0.31
UniRef50_A0DAX2 Cluster: Chromosome undetermined scaffold_43, wh... 38 0.40
UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20; Bacteri... 38 0.40
UniRef50_P32060 Cluster: Chloroplast 30S ribosomal protein S9; n... 38 0.40
UniRef50_A5FRV9 Cluster: Ribosomal protein S9; n=5; Bacteria|Rep... 38 0.53
UniRef50_Q1IU83 Cluster: 30S ribosomal protein S9; n=22; cellula... 37 0.70
UniRef50_A5K530 Cluster: 30S ribosomal protein S9, putative; n=5... 37 0.70
UniRef50_A7ANP2 Cluster: Ribosomal protein S9, putative; n=1; Ba... 36 1.2
UniRef50_P56358 Cluster: Chloroplast 30S ribosomal protein S9; n... 36 1.2
UniRef50_UPI0000E7FB25 Cluster: PREDICTED: similar to mitochondr... 36 1.6
UniRef50_Q5GS63 Cluster: 30S ribosomal protein S9; n=1; Wolbachi... 36 1.6
UniRef50_A0L8Q2 Cluster: (NiFe) hydrogenase maturation protein H... 34 5.0
UniRef50_Q54CK4 Cluster: Putative uncharacterized protein; n=1; ... 34 5.0
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 34 5.0
UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; cor... 33 8.7
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 190 bits (463), Expect = 5e-47
Identities = 86/107 (80%), Positives = 103/107 (96%)
Frame = +1
Query: 88 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 267
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 268 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 408
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDIL 112
Score = 71.7 bits (168), Expect = 3e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 413 QYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 114 QYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 180 bits (438), Expect = 5e-44
Identities = 85/111 (76%), Positives = 100/111 (90%)
Frame = +1
Query: 76 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKE 255
A +E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ +EP L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 256 KFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 408
+F+ VDIR+ VKGGG+VAQ+YAIRQAISKAL+A+YQKYVDE SKKEIKD L
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIYAIRQAISKALVAYYQKYVDEQSKKEIKDTL 114
Score = 76.2 bits (179), Expect = 1e-12
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +2
Query: 386 RRKSKTS*XQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
+++ K + QYDR+LLVADPRRCEPKKFGGPGARARYQKSYR
Sbjct: 107 KKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 145 bits (351), Expect = 2e-33
Identities = 64/103 (62%), Positives = 87/103 (84%)
Frame = +1
Query: 91 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 270
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LVEP +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 271 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIK 399
DIRV V GGGHV+QVYAIRQAI+K L+A++QKYVDE SK E+K
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELK 106
Score = 59.7 bits (138), Expect = 1e-07
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = +2
Query: 374 TKPQRRKSKTS*XQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
+K + +K+ TS YDR+LL+AD RR EPKKFGG GAR+R+QKSYR
Sbjct: 101 SKNELKKAFTS---YDRTLLIADSRRPEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 110 bits (264), Expect = 6e-23
Identities = 57/106 (53%), Positives = 74/106 (69%)
Frame = +1
Query: 91 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 270
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 271 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 408
DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTL 122
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 98.7 bits (235), Expect = 2e-19
Identities = 47/109 (43%), Positives = 71/109 (65%)
Frame = +1
Query: 73 EARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGK 252
E R V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+
Sbjct: 16 EVRERDKYTVHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGE 75
Query: 253 EKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIK 399
F +D+ + V GGGHV+Q+YA+RQAIS+ ++A + DEA++ E++
Sbjct: 76 SLFKGLDMNIKVAGGGHVSQIYAVRQAISRGVLASVK---DEAARSELR 121
Score = 59.7 bits (138), Expect = 1e-07
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +2
Query: 416 YDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
YDR L+V+DPRRCE KKFGG GARAR QKSYR
Sbjct: 127 YDRQLVVSDPRRCEAKKFGGRGARARRQKSYR 158
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 95.9 bits (228), Expect = 1e-18
Identities = 50/105 (47%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Frame = +1
Query: 91 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 267
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 268 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKD 402
+ I V V GGG V+Q YA RQAI+K LIAF+QKY +E K +KD
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKD 113
Score = 53.2 bits (122), Expect = 1e-05
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 416 YDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
YD+ LL+ADPRRCEPKK+G AR R+ KSYR
Sbjct: 118 YDKFLLIADPRRCEPKKWGRHSARTRFTKSYR 149
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 93.5 bits (222), Expect = 8e-18
Identities = 43/102 (42%), Positives = 67/102 (65%)
Frame = +1
Query: 100 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIR 279
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP +LG + ++
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 280 VTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDI 405
+ KGGG V+Q+YAIRQ+ISK L+ +Y KY+ ASK + I
Sbjct: 63 IFSKGGGKVSQIYAIRQSISKCLVFYYYKYI-SASKSNLLKI 103
Score = 52.8 bits (121), Expect = 1e-05
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2
Query: 416 YDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
YD+ LL++D R EPKK+GG GARAR+QKSYR
Sbjct: 108 YDKKLLISDVSRIEPKKYGGLGARARFQKSYR 139
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 87.8 bits (208), Expect = 4e-16
Identities = 38/57 (66%), Positives = 50/57 (87%)
Frame = +1
Query: 229 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIK 399
EP+L++G +KF+ VDIRV V GGGH +QVYAIRQAI+K+L+A+YQKYVDE SK ++K
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQAIAKSLVAYYQKYVDEHSKNQLK 118
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 386 RRKSKTS*XQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
+ + K + QYDR+LLVAD RR EPKKFGG GARARYQKSYR
Sbjct: 114 KNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 83.4 bits (197), Expect = 8e-15
Identities = 35/87 (40%), Positives = 62/87 (71%)
Frame = +1
Query: 91 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 270
++ +Q G++KTA A A + G G +R+NG+P++++EP + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 271 DIRVTVKGGGHVAQVYAIRQAISKALI 351
DI V V+GGG + Q A R AI++AL+
Sbjct: 61 DIDVKVQGGGFMGQAEAARIAIARALV 87
Score = 39.9 bits (89), Expect = 0.100
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +2
Query: 413 QYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 511
+YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 101 KYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 79.4 bits (187), Expect = 1e-13
Identities = 31/56 (55%), Positives = 49/56 (87%)
Frame = +1
Query: 97 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFS 264
+V FG+KKTATAVA+CK G G++R+NG+P+ LV+P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
Score = 61.7 bits (143), Expect = 3e-08
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = +1
Query: 262 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDI 405
S VDIR+ V GGG +Q+YAIRQAI+K+L+A+Y KY D AS E++ +
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQL 164
Score = 58.0 bits (134), Expect = 4e-07
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +2
Query: 416 YDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
YDR+LL+AD RR EPKKFGG GARAR QKSYR
Sbjct: 168 YDRTLLIADTRRSEPKKFGGHGARARRQKSYR 199
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 73.3 bits (172), Expect = 9e-12
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +1
Query: 91 IQAVQVFGRKKTATAVAYCKR-GHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 267
+++V G+KK A A C + G +R+N P L+ L+ KL+E I ++ +
Sbjct: 5 VKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANIKD 64
Query: 268 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIK 399
+ +T K GG V++VYA+R A +KA++AFY Y DE K+EI+
Sbjct: 65 LSFDITCKIGGDVSRVYAVRMAFAKAILAFYGTYFDEWKKQEIQ 108
Score = 58.4 bits (135), Expect = 3e-07
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +2
Query: 416 YDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
+DR LVAD R+ EPKKFGGPGARARYQKSYR
Sbjct: 114 FDRFSLVADSRKREPKKFGGPGARARYQKSYR 145
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 71.7 bits (168), Expect = 3e-11
Identities = 33/84 (39%), Positives = 55/84 (65%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 291
G++K A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+VDIRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 292 GGGHVAQVYAIRQAISKALIAFYQ 363
GGG + Q A+R AI++ L+ F++
Sbjct: 71 GGGVMGQADAVRMAIARGLVEFFR 94
Score = 47.2 bits (107), Expect = 7e-04
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 389 RKSKTS*XQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
R +T+ ++DR++LV DPRR EP+K+ AR R+QKSYR
Sbjct: 111 RDLRTAFLEHDRTMLVGDPRRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 66.1 bits (154), Expect = 1e-09
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 88 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPRLLQYKLQEPILLLGKEKFS 264
P+Q+ QVFG KK A +A +G +++V L++ EP QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 265 MVDIRVTVKGGGHVAQVYAI 324
V I V V G G VAQ+YAI
Sbjct: 83 RVGIWVRVNGVGRVAQIYAI 102
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 59.7 bits (138), Expect = 1e-07
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 285
G++K A A + K G G + VNG+PLD L L+ +++ P++L+ +E DI V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 286 VKGGGHVAQVYAIRQAISKALIAFYQKY 369
V GGG AQ AI+ ISKAL+ + ++
Sbjct: 69 VLGGGFAAQADAIKHGISKALVEYAPEF 96
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 55.2 bits (127), Expect = 2e-06
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 288
GR+KT+TA + +G G + VNG+PLD R + +++P+ LL + DI TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 289 KGGGHVAQVYAIRQAISKALI 351
KGGG Q AIR I++ALI
Sbjct: 66 KGGGINGQAGAIRHGITRALI 86
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 54.0 bits (124), Expect = 6e-06
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +1
Query: 100 VQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILL-LGKEKFSMVD 273
+ GR+KTA A Y K G G+++VN P + LL K+ +P+LL + KF D
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKF---D 64
Query: 274 IRVTVKGGGHVAQVYAIRQAISKALIAF 357
+ V GGG +Q AI AIS+AL F
Sbjct: 65 FYIKVSGGGINSQAEAISLAISRALCKF 92
>UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microscilla
marina ATCC 23134|Rep: 30S ribosomal protein S9 -
Microscilla marina ATCC 23134
Length = 172
Score = 54.0 bits (124), Expect = 6e-06
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +1
Query: 91 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLL-GKEKFS 264
++ + GR+KT+ A Y + G G + VN R P +LQ +++PI+ + EKF
Sbjct: 7 VKIINTIGRRKTSIARVYLQEGSGQITVNKRDFAEYFPTDVLQTIVKQPIVAVDANEKF- 65
Query: 265 MVDIRVTVKGGGHVAQVYAIRQAISKAL 348
DIR V GGG Q A+R AI++AL
Sbjct: 66 --DIRANVTGGGVAGQAEALRHAIARAL 91
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 53.6 bits (123), Expect = 8e-06
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 288
GR+KT+ A G G + VNG P L+ L L++P++ G EK DI VTV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEKD--FDITVTV 68
Query: 289 KGGGHVAQVYAIRQAISKALIAFYQKY 369
KGGG Q A R I++AL+ + Y
Sbjct: 69 KGGGFTGQAGATRLGIARALLVASEDY 95
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 288
GR+KT++A + + G G + +NG PLD R + +++P++ L + S D+ TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 289 KGGGHVAQVYAIRQAISKALIAF 357
+GGG Q AIR I++ALI +
Sbjct: 71 QGGGDSGQAGAIRHGITRALIQY 93
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 52.4 bits (120), Expect = 2e-05
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +2
Query: 374 TKPQRRKSKTS*XQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
TK R + +D+ L+ D RR EPKKFGGPGAR R QKSYR
Sbjct: 104 TKTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGARRRKQKSYR 149
Score = 50.4 bits (115), Expect = 7e-05
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = +1
Query: 109 FGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 288
F +K A+A Y +G G +R+N P +++ + + P+ + G + VDI V V
Sbjct: 10 FATRKAASAHVYIIKGTGRVRINNVPAEMIVHESAREAILAPLDIAGDAR-KKVDISVRV 68
Query: 289 KGGGHVAQVYAIRQAISKALIAF 357
KGGG + Q A IS+ALI +
Sbjct: 69 KGGGFMGQAGASATGISRALIGW 91
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 49.2 bits (112), Expect = 2e-04
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 288
GR+KTA A K G G L +NG+ L D + + ++ P L E F VD+ V V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 289 KGGGHVAQVYAIRQAISKALIAFYQKYVDEAS 384
GGG Q AI I++AL A+ ++ + S
Sbjct: 139 TGGGTTGQTGAIVLGIARALEAYNNQFHETLS 170
>UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28;
Bacteria|Rep: 30S ribosomal protein S9 - Idiomarina
loihiensis
Length = 130
Score = 48.8 bits (111), Expect = 2e-04
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGK-EKFSMVDIRVT 285
GR+K +TA + + G G +++N R L+ R Q +++P+ L+ EKF D+ +T
Sbjct: 10 GRRKNSTARVFLRPGSGNIKINNRELNEYFGRETAQMVVRQPLELVEMTEKF---DMYIT 66
Query: 286 VKGGGHVAQVYAIRQAISKALIAF 357
V GGG Q AIR I++AL+ +
Sbjct: 67 VSGGGTTGQAGAIRHGITRALMQY 90
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 48.8 bits (111), Expect = 2e-04
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 288
GR+K A G G + NGR L D +L Q ++ P++LLG+E DI +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 289 KGGGHVAQVYAIRQAISKALIAF 357
GGG Q A R AI++AL A+
Sbjct: 120 GGGGPTGQAGAFRLAIARALNAY 142
>UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellular
organisms|Rep: 30S ribosomal protein S9 - Mesorhizobium
sp. (strain BNC1)
Length = 160
Score = 48.4 bits (110), Expect = 3e-04
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 288
G++K A A + K G G + VN + R +LQ LQ+PI+ + DI TV
Sbjct: 40 GKRKNAIARVWVKPGSGKILVNDKEFTQYFARPVLQMILQQPIVATNRN--GQYDIVATV 97
Query: 289 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKK 390
GGG Q A+R IS+AL FY+ + KK
Sbjct: 98 VGGGLSGQAGAVRHGISRAL-TFYEPELRAVLKK 130
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 48.0 bits (109), Expect = 4e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 288
GR+K + A + K+G G + VNGR +D + ++ P ++ + + D+R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 289 KGGGHVAQVYAIRQAISKALIAF 357
GGGH Q A+ I+KALI F
Sbjct: 87 AGGGHTGQAGAMVHGIAKALILF 109
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 48.0 bits (109), Expect = 4e-04
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +1
Query: 112 GRKKTATAVAYC--KRGHGMLRVNGR-PLDLVEPRLLQYKLQEPILLLG-KEKFSMVDIR 279
GR+K++TA Y + G + +N R P D +L+ +++P+ L K+ F DI
Sbjct: 10 GRRKSSTAKVYLYQSKDKGKITINHRNPSDYFPNKLVIQDMEQPLELTKLKDNF---DIN 66
Query: 280 VTVKGGGHVAQVYAIRQAISKALIAF 357
V VKGGG Q AIR I +ALI F
Sbjct: 67 VVVKGGGFTGQAGAIRLGIVRALIKF 92
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 47.6 bits (108), Expect = 5e-04
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Frame = +1
Query: 88 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPR--LLQYKLQEPILLLGKEK 258
P + + GR+KT+ A A K G G + VN + + D ++ R +++ ++ LL ++K
Sbjct: 10 PAKEIWAVGRRKTSVARAKIKEGSGKITVNHKDIKDYLQNRKAIIEEAIRPLSLLNVQDK 69
Query: 259 FSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 393
+ D+ + V GGG QV AIR A+++A+ ++ A KKE
Sbjct: 70 Y---DLNLNVTGGGTTGQVGAIRHALARAICRIKPEF-RPAVKKE 110
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 47.6 bits (108), Expect = 5e-04
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 288
GR+K + A G G + +NGR LD L+ +++P++ G E D+RV V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 289 KGGGHVAQVYAIRQAISKALIAFYQKY 369
GGG Q AIR I++AL+ +Y
Sbjct: 68 DGGGFTGQAGAIRHGIARALLQVDPEY 94
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 47.2 bits (107), Expect = 7e-04
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 288
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 289 KGGGHVAQVYAIRQAISKALIAF 357
GGG AQ AIR A++KAL +F
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSF 355
>UniRef50_P38120 Cluster: 37S ribosomal protein S9, mitochondrial
precursor; n=7; Saccharomycetales|Rep: 37S ribosomal
protein S9, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 278
Score = 46.8 bits (106), Expect = 9e-04
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPIL--LLGKEKFSMVDIRVT 285
G++K++TA + RG G + VNGR L+ L+ K +E I+ L E +I T
Sbjct: 158 GKRKSSTAKVFVVRGTGEILVNGRQLN---DYFLKMKDRESIMYPLQVIESVGKYNIFAT 214
Query: 286 VKGGGHVAQVYAIRQAISKALIAF 357
GGG Q +I AI+KAL+ F
Sbjct: 215 TSGGGPTGQAESIMHAIAKALVVF 238
>UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellular
organisms|Rep: 30S ribosomal protein S9 - Rhizobium loti
(Mesorhizobium loti)
Length = 160
Score = 46.4 bits (105), Expect = 0.001
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 288
G++K A A + K G G + VN + R +LQ L +PI+ + DI TV
Sbjct: 40 GKRKNAIARVWVKPGSGKIVVNDKEFATYFARPVLQMILNQPII--ASNRSGQYDIVATV 97
Query: 289 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKK 390
GGG Q A+R ISKAL +Y+ + KK
Sbjct: 98 VGGGLSGQAGAVRHGISKAL-TYYEPALRAVLKK 130
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 46.0 bits (104), Expect = 0.002
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPR-LLQYKLQEPILLLG-KEKFSMVDIRV 282
GR+KT+ A G+G +NG ++ ++ + L + +QEP+ L K +F+++ +
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 283 TVKGGGHVAQVYAIRQAISKALIAFYQKY 369
VKGGG V QV AI+ I++AL F Y
Sbjct: 77 KVKGGGLVGQVNAIKLGIARALCEFDLTY 105
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 0.005
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 82 REPIQAVQVFGRKKTATAVAYCKRGHGMLRV 174
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellular
organisms|Rep: 30S ribosomal protein S9 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 136
Score = 44.4 bits (100), Expect = 0.005
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 288
GR+K++ A Y + G G ++VN R D ++ L+ P++L D+ + V
Sbjct: 16 GRRKSSVARVYIREGSGNIKVNNRDFDSYIQLENLRTMALSPLVL--TNTLGKYDLYINV 73
Query: 289 KGGGHVAQVYAIRQAISKAL 348
GGG Q AIR IS+AL
Sbjct: 74 YGGGISGQSGAIRHGISRAL 93
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 43.6 bits (98), Expect = 0.008
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 291
G++KT++AV + G G + VNG+ L PR L + L + ++ TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 292 GGGHVAQVYAIRQAISKALI 351
GGG Q A+ A+ +AL+
Sbjct: 254 GGGVTGQAEAVTLALGRALL 273
>UniRef50_Q9ZDU0 Cluster: 30S ribosomal protein S9; n=29;
Proteobacteria|Rep: 30S ribosomal protein S9 -
Rickettsia prowazekii
Length = 161
Score = 43.2 bits (97), Expect = 0.011
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Frame = +1
Query: 64 AVQEARREPIQAVQVF---GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQE 231
+V + +E I +V F G++K A A + K G G + VN + L+ P K + +
Sbjct: 22 SVLKIPKEKIDSVSKFYATGKRKNAIARVWLKVGKGKIVVNNKILNQYFPSETYVKTILQ 81
Query: 232 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKAL 348
P +L + D+ TVKGGG Q AI ISKAL
Sbjct: 82 PFILT--KTIDQYDVICTVKGGGISGQKGAILHGISKAL 118
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 42.7 bits (96), Expect = 0.014
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 82 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQ-YKLQEPILLLGKEK 258
+ IQ GR+K A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLG--D 60
Query: 259 FSMVDIRVTVKGGGHVAQVYAIRQAISKALI 351
+ D+ + V GGG QV A R +++A++
Sbjct: 61 VNSFDLIIRVSGGGVQGQVIATRLGLARAVL 91
>UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=1; Schizosaccharomyces pombe|Rep: 40S
ribosomal protein S9, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 132
Score = 41.9 bits (94), Expect = 0.025
Identities = 26/80 (32%), Positives = 39/80 (48%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 291
G++K++ A G G VNG P D+ R++ K L + + ++ TV
Sbjct: 12 GKRKSSKATVKMLPGTGKFYVNGSPFDVYFQRMVHRK-HAVYPLAACNRLTNYNVWATVH 70
Query: 292 GGGHVAQVYAIRQAISKALI 351
GGG Q A+ AISK+LI
Sbjct: 71 GGGPTGQSGAVHAAISKSLI 90
>UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellular
organisms|Rep: 30S ribosomal protein S9 - Anabaena sp.
(strain PCC 7120)
Length = 138
Score = 41.9 bits (94), Expect = 0.025
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQY--KLQEPILLLGKEKFSMVDIRVT 285
GR+K+A A G G L VNG+P DL Y ++ P+ LG E + DI V
Sbjct: 17 GRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLE--NEYDILVK 74
Query: 286 VKGGGHVAQVYAIRQAISKAL 348
+GGG Q ++R +++AL
Sbjct: 75 AEGGGLTGQADSVRLGVARAL 95
>UniRef50_O94150 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=5; Saccharomycetales|Rep: 40S ribosomal
protein S9, mitochondrial precursor - Candida albicans
(Yeast)
Length = 336
Score = 41.5 bits (93), Expect = 0.033
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 115 RKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILLLGKEKFSMVDIRVTVK 291
++K++ A Y +G G + VNG+ L P + K L P ++ +E V +VT
Sbjct: 217 KRKSSIAKIYLVKGEGEVLVNGKSLIEFFPNIYARKNLLYPFQVVEQEGKYNVFAQVT-- 274
Query: 292 GGGHVAQVYAIRQAISKALIAF 357
GGG+ Q AI AI+KAL+ F
Sbjct: 275 GGGYTGQSEAIMYAIAKALVVF 296
>UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;
Pezizomycotina|Rep: Contig An15c0060, complete genome -
Aspergillus niger
Length = 221
Score = 41.1 bits (92), Expect = 0.043
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPIL-LLGKEKFSMVDIRVTV 288
G++K ++AV G G + VNG+ L+ PRL + + + L + ++ TV
Sbjct: 101 GKRKASSAVVQLVEGEGEVLVNGKTLNEAFPRL--HDRESAVWPLRCTSRLDKYNVWATV 158
Query: 289 KGGGHVAQVYAIRQAISKALI 351
+GGG Q AI A+++AL+
Sbjct: 159 RGGGVTGQAEAITLAVARALL 179
>UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9;
Bacteria|Rep: 30S ribosomal protein S9 - Thermotoga
maritima
Length = 134
Score = 41.1 bits (92), Expect = 0.043
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLV-----EPRLLQYKLQEPILLLGKEKFSMVDI 276
GR+KTA A Y + G G ++VNG+ + + P ++ + EP+ + D+
Sbjct: 11 GRRKTAVARVYLRPGEGKVKVNGKEYESLNDYFKNPAWTKHAI-EPLEV--TNTLGKFDL 67
Query: 277 RVTVKGGGHVAQVYAIRQAISKALIAFYQ 363
+ V GGG Q A+R I++AL+ + Q
Sbjct: 68 VIRVNGGGLSGQSGAVRLGIARALLQYDQ 96
>UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellular
organisms|Rep: 30S ribosomal protein S9 - Streptomyces
avermitilis
Length = 173
Score = 40.7 bits (91), Expect = 0.057
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +1
Query: 85 EPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKF 261
EP Q GR+K A A G G ++NGR L D ++ Q ++ EP +L E
Sbjct: 44 EP-QPAAGLGRRKNAIARVRIVPGTGKWKINGRTLEDYFPNKVHQQEVNEPFKVLELE-- 100
Query: 262 SMVDIRVTVKGGGHVAQVYAIRQAISKAL 348
D+ + GGG Q A+R +++AL
Sbjct: 101 GRYDVIARISGGGVSGQAGALRLGVARAL 129
>UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66;
Bacteria|Rep: 30S ribosomal protein S9 - Mycoplasma
pulmonis
Length = 136
Score = 39.9 bits (89), Expect = 0.100
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +1
Query: 97 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVD 273
A + GR+K++ A +G G +N R + ++ + +P L + + D
Sbjct: 11 AFRGLGRRKSSVARVILLKGSGKFTINKREAKEYLKSDIYIKDALQPFDLT--QTNNTFD 68
Query: 274 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKY 369
IRVTV+GGG Q AIR I++AL+ Y
Sbjct: 69 IRVTVRGGGLAGQAGAIRLGIARALLEISADY 100
>UniRef50_Q9AR08 Cluster: 9S ribosomal protein; n=4; Poaceae|Rep: 9S
ribosomal protein - Zea mays (Maize)
Length = 221
Score = 39.5 bits (88), Expect = 0.13
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +1
Query: 94 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLV---EPRLLQYKLQEPILLLGKEKFS 264
Q + GR+KTA A + G G + +N R P ++Y + P++ LG EK
Sbjct: 94 QRITATGRRKTAIARVVLQEGTGKVFINFRDAKEYLQGNPMWMEY-CKVPLMTLGFEK-- 150
Query: 265 MVDIRVTVKGGGHVAQVYAIRQAISKALI 351
D+ V V GGG Q AI +++AL+
Sbjct: 151 NYDVFVKVHGGGLSGQAQAICLGVARALV 179
>UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular
organisms|Rep: 30S ribosomal protein S9 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 137
Score = 39.5 bits (88), Expect = 0.13
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQYKL-QEPILLLGKEKFSMVDIRVT 285
GR+K+A A G G L +NGR D ++ + L + P+ LG E + DI V
Sbjct: 16 GRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLE--NSYDIYVN 73
Query: 286 VKGGGHVAQVYAIRQAISKAL 348
GGG Q AIR I++AL
Sbjct: 74 ATGGGLTGQADAIRLGIARAL 94
>UniRef50_Q2GXL6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 321
Score = 39.1 bits (87), Expect = 0.17
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLL-GKEKFSMVDIRVTV 288
G++K++ A AY G G + +NG+ L R+ + + + L ++ ++ V
Sbjct: 201 GKRKSSIARAYVVEGDGQVLINGKTLPDYFGRI--HDRESAVWALHSTDRIDKYNVWARV 258
Query: 289 KGGGHVAQVYAIRQAISKALIA 354
+GGG Q A+ AI+KAL+A
Sbjct: 259 EGGGTTGQAEALTLAIAKALLA 280
>UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p -
Drosophila melanogaster (Fruit fly)
Length = 395
Score = 38.7 bits (86), Expect = 0.23
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +1
Query: 118 KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKG 294
+KTA A V G G + +NG+ + E + +L P+ E VD+ V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333
Query: 295 GGHVAQVYAIRQAISKALIAFYQKYVDEASK 387
GG Q AIR I+ +L +F + + E+ +
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMR 364
>UniRef50_Q7P3E8 Cluster: 30S ribosomal protein S9; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
30S ribosomal protein S9 - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 101
Score = 38.3 bits (85), Expect = 0.31
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 288
GR+KT+ A G + +NG+ +D R + K+ E L L E + ++V V
Sbjct: 12 GRRKTSVARVRLIPGGQGVEINGKAMDEYFGGRAILSKIVEQPLAL-TETLNKFAVKVNV 70
Query: 289 KGGGHVAQVYAIRQAISKALIAFYQK 366
GGG+ Q AIR K++I K
Sbjct: 71 VGGGNSGQAGAIRHGCCKSIITLLMK 96
>UniRef50_Q1JSU2 Cluster: Ribosomal protein s9, putative; n=1;
Toxoplasma gondii|Rep: Ribosomal protein s9, putative -
Toxoplasma gondii
Length = 286
Score = 38.3 bits (85), Expect = 0.31
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK---LQEPILLLGKEKFSMVDIRV 282
G +K A A +RG G +RVN DL Y + +P L G + D+ +
Sbjct: 165 GTRKRAAAHVIIRRGTGQVRVNNDE-DLYVRWPFYYNRMDVLQPFFLTGTA--GIYDLFI 221
Query: 283 TVKGGGHVAQVYAIRQAISKALIA 354
V+GGG Q A+R A+ +AL++
Sbjct: 222 HVRGGGSSGQAGAVRLAVGRALVS 245
>UniRef50_Q7S7R6 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=3; Pezizomycotina|Rep: 40S ribosomal
protein S9, mitochondrial precursor - Neurospora crassa
Length = 314
Score = 38.3 bits (85), Expect = 0.31
Identities = 26/81 (32%), Positives = 41/81 (50%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 291
G++K ++A A+ G G + VNG+ L R+ + L + ++ V V+
Sbjct: 194 GKRKASSARAFVVEGTGEVLVNGKTLAEYFGRVHDRE-SAVWALRATNRIDKYNVWVKVE 252
Query: 292 GGGHVAQVYAIRQAISKALIA 354
GGG Q AI AI+KAL+A
Sbjct: 253 GGGTTGQAEAITLAIAKALLA 273
>UniRef50_A0DAX2 Cluster: Chromosome undetermined scaffold_43, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_43,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 700
Score = 37.9 bits (84), Expect = 0.40
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 291
GR+K++ K+G G + VNG+ L + + +L L +VD+ V ++
Sbjct: 580 GRRKSSICYVQLKKGVGEVTVNGKNLINYFTHPIYRRTALRVLELAHLS-CLVDVNVVIR 638
Query: 292 GGGHVAQVYAIRQAISKALI 351
GG AQ I A+S+A++
Sbjct: 639 GGSQSAQSQCICSALSRAIV 658
>UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20;
Bacteria|Rep: 30S ribosomal protein S9 - Rhodopirellula
baltica
Length = 137
Score = 37.9 bits (84), Expect = 0.40
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 285
GR+K++ A + G G + +NG+ ++ V + +Y + E + G + VD+ +
Sbjct: 17 GRRKSSVARVRVRPGSGKITINGKSIEEYFVNDQH-RYAITETLEAAGLTE--SVDLLIR 73
Query: 286 VKGGGHVAQVYAIRQAISKAL 348
V GGG Q A+R +++AL
Sbjct: 74 VSGGGMTGQAGAVRMGLARAL 94
>UniRef50_P32060 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Euglena|Rep: Chloroplast 30S ribosomal protein S9 -
Euglena gracilis
Length = 134
Score = 37.9 bits (84), Expect = 0.40
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Frame = +1
Query: 91 IQAVQVFGRKKTATAVAYC---KRGHGMLRVNG-RPLDLVEPRLLQYKLQ-EPILLLGKE 255
+ +++V G++K++ A K G G + +NG + + ++ L K+ P LL
Sbjct: 3 LNSIEVIGKRKSSIAKIILFLPKDGGGEILINGEKAFNYLQNNLRTLKVVCSPFELLNIN 62
Query: 256 KFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQK 366
+ + VKGGG Q AI+ AISK+L F +K
Sbjct: 63 NYK---VHAYVKGGGLSGQADAIKLAISKSLSVFIEK 96
>UniRef50_A5FRV9 Cluster: Ribosomal protein S9; n=5; Bacteria|Rep:
Ribosomal protein S9 - Dehalococcoides sp. BAV1
Length = 132
Score = 37.5 bits (83), Expect = 0.53
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPIL--LLGKEKFSMVDIRVT 285
GR+KTA A G+G++ ++G+P +E R + + + IL ++ + + +
Sbjct: 12 GRRKTAVATVKLMSGNGVIVIDGKP---IEERFTRIQERNVILNPMMVTDTMGKFNAVIK 68
Query: 286 VKGGGHVAQVYAIRQAISKAL 348
V GGG Q AI I++AL
Sbjct: 69 VLGGGVTGQSGAIAHGIARAL 89
>UniRef50_Q1IU83 Cluster: 30S ribosomal protein S9; n=22; cellular
organisms|Rep: 30S ribosomal protein S9 - Acidobacteria
bacterium (strain Ellin345)
Length = 131
Score = 37.1 bits (82), Expect = 0.70
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 288
GR+K+A A + + G G +VNG+ + + + P++L E + ++ V
Sbjct: 11 GRRKSAVARVFLRPGSGEFKVNGKGFEEYFVTEAQRQSAKSPLVL--TETIATFNVVANV 68
Query: 289 KGGGHVAQVYAIRQAISKALIAF 357
GGG Q A++ +++AL F
Sbjct: 69 SGGGVNGQADAVKMGLARALQEF 91
>UniRef50_A5K530 Cluster: 30S ribosomal protein S9, putative; n=5;
Plasmodium|Rep: 30S ribosomal protein S9, putative -
Plasmodium vivax
Length = 304
Score = 37.1 bits (82), Expect = 0.70
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 85 EPIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPRLL-QYKLQEPILLLGKEK 258
E ++ + G K ++A Y KRG G+++VN L + P + + EP +
Sbjct: 174 EWLEESEGIGTNKRSSAYVYIKRGSGIVKVNDEEDLYIRWPYFYNRMDVLEPFYVTNTA- 232
Query: 259 FSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEI 396
+ D+ + +KGGG Q A R A+ +AL+ DE + I
Sbjct: 233 -CVFDVFIKLKGGGISGQSKAARLAVGRALLNACPLIYDELKQHHI 277
>UniRef50_A7ANP2 Cluster: Ribosomal protein S9, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S9, putative -
Babesia bovis
Length = 683
Score = 36.3 bits (80), Expect = 1.2
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +1
Query: 85 EPIQAVQVF--GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGK-E 255
EP++ +V+ G +KT+ AV Y + G+G + +N R R ++L+E + L
Sbjct: 550 EPVKFTKVYERGSRKTSVAVVYLEPGNGHIIINDRD-GYQYVRYCTHRLREILEPLDSIY 608
Query: 256 KFSMVDIRVTVKGGGHVAQVYAIRQAISK 342
+ +I V GGG Q AIR A+ +
Sbjct: 609 AYKRFNIVARVNGGGISGQSGAIRHALCR 637
>UniRef50_P56358 Cluster: Chloroplast 30S ribosomal protein S9; n=1;
Chlorella vulgaris|Rep: Chloroplast 30S ribosomal
protein S9 - Chlorella vulgaris (Green alga)
Length = 137
Score = 36.3 bits (80), Expect = 1.2
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 271 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKY 369
D+ + V+GGG AQ A++ A+SKA + F+ +Y
Sbjct: 69 DVHILVEGGGLSAQAQAVKLALSKAFVDFFPEY 101
>UniRef50_UPI0000E7FB25 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S9 isoform 1; n=1; Gallus gallus|Rep:
PREDICTED: similar to mitochondrial ribosomal protein S9
isoform 1 - Gallus gallus
Length = 340
Score = 35.9 bits (79), Expect = 1.6
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +1
Query: 112 GRKKT--ATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 285
G +KT ATAV Y G G + VNG + P +LQ + Q ++ D T
Sbjct: 218 GVRKTSRATAVVY-DNGTGKITVNGIDILRYFP-VLQDREQLLFPFQFLDRVGKHDAICT 275
Query: 286 VKGGGHVAQVYAIRQAISKALIAF 357
V GGG +Q AIR A +KAL +F
Sbjct: 276 VSGGGRSSQAGAIRLATAKALRSF 299
>UniRef50_Q5GS63 Cluster: 30S ribosomal protein S9; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: 30S
ribosomal protein S9 - Wolbachia sp. subsp. Brugia
malayi (strain TRS)
Length = 148
Score = 35.9 bits (79), Expect = 1.6
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGK------EKFSMVD 273
GR+K + A + K G G VN + +LL Y +E + + K D
Sbjct: 27 GRRKESAARVWIKSGSGKFSVNQ------QDKLLSYFKRESVCQIVKMPLIVTSTLDKYD 80
Query: 274 IRVTVKGGGHVAQVYAIRQAISKAL 348
+ TVKGGG Q A+ ISKAL
Sbjct: 81 VFATVKGGGLSGQAGALAHGISKAL 105
>UniRef50_A0L8Q2 Cluster: (NiFe) hydrogenase maturation protein
HypF; n=3; Proteobacteria|Rep: (NiFe) hydrogenase
maturation protein HypF - Magnetococcus sp. (strain
MC-1)
Length = 758
Score = 34.3 bits (75), Expect = 5.0
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -1
Query: 223 VCTAAVWAQPSPMGARLHAA-FHDHACNTQLRWRFSYVRILGRPGWAHVLPPAQQAILQN 47
+C A + +P+ R HA AC QL W++ +I+G + QQ ++
Sbjct: 156 LCKACLAEYQNPLDRRFHAQPLACPACGPQLTWQYGSEKIIGESALTQAVAGLQQGLIVA 215
Query: 46 LKG 38
+KG
Sbjct: 216 VKG 218
>UniRef50_Q54CK4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 339
Score = 34.3 bits (75), Expect = 5.0
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 109 FGRKKTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 285
+ ++K + AV + G+G + +NGR LD + + +P+++ E + D+ +
Sbjct: 218 YSKRKRSRAVVSIQPGNGSILINGRTLLDYFPSISYRDNVVQPLVI--TETLTKWDVSIR 275
Query: 286 VKGGGHVAQVYAIRQAISKALIAF 357
GGG Q A R+A+ +L+ +
Sbjct: 276 AFGGGLKGQSEAARRALGFSLVNY 299
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 34.3 bits (75), Expect = 5.0
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 76 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILL 243
ARR P+ + VF R ++ V K G G+ + G LD +P L K L P+LL
Sbjct: 505 ARRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
>UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; core
eudicotyledons|Rep: 30S ribosomal protein S9-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 143
Score = 33.5 bits (73), Expect = 8.7
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 112 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 291
GR+K + A + + G G +VN + D+ P +L ++ L + DI+ TVK
Sbjct: 23 GRRKCSIARVWIQPGEGKFQVNEKEFDVYFP-MLDHRAALLRPLAETKTLGRWDIKCTVK 81
Query: 292 GGG 300
GGG
Sbjct: 82 GGG 84
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,311,922
Number of Sequences: 1657284
Number of extensions: 14313678
Number of successful extensions: 33892
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 32904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33870
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 94306056537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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