Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F17
         (1000 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    26   2.0  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   6.2  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
 Frame = -1

Query: 229 PEVCTAAVWAQPSPM---GARLHAAFHD----HACNTQLRWRFSYVRI-LGRPGWAHVLP 74
           PEV    V+ +P  +   G  LH         H    +L+   +  R+ L  P W H+  
Sbjct: 169 PEVVARRVYGKPCDVWGAGVMLHVLLSGRLPFHGSGKRLQDAIARGRVTLDTPEWKHISS 228

Query: 73  PAQQAILQNLKGFPIS 26
            A+  +L+ L   PIS
Sbjct: 229 NAKDLVLKMLAPNPIS 244


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 6.2
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 277 RVTVKGGGHVAQVYAIRQAISKALIAFYQKYV-DEASKKEI 396
           RV     G VA V A+ + I+ A   FY KYV D+  +K I
Sbjct: 140 RVFGISSGCVAFVMALERYIALAKPFFYHKYVTDKLIRKSI 180


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,787
Number of Sequences: 2352
Number of extensions: 14555
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 109763433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)