Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F17
(1000 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 190 7e-48
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 190 7e-48
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 190 7e-48
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 190 7e-48
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 136 9e-32
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 110 9e-24
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 47 9e-05
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 47 9e-05
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ... 33 2.1
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ... 33 2.1
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 190 bits (463), Expect = 7e-48
Identities = 86/107 (80%), Positives = 103/107 (96%)
Frame = +1
Query: 88 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 267
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 268 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 408
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDIL 112
Score = 71.7 bits (168), Expect = 4e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 413 QYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 114 QYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 190 bits (463), Expect = 7e-48
Identities = 86/107 (80%), Positives = 103/107 (96%)
Frame = +1
Query: 88 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 267
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 268 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 408
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDIL 112
Score = 71.7 bits (168), Expect = 4e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 413 QYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 114 QYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 190 bits (463), Expect = 7e-48
Identities = 86/107 (80%), Positives = 103/107 (96%)
Frame = +1
Query: 88 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 267
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 268 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 408
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDIL 112
Score = 71.7 bits (168), Expect = 4e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 413 QYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 114 QYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 190 bits (463), Expect = 7e-48
Identities = 86/107 (80%), Positives = 103/107 (96%)
Frame = +1
Query: 88 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 267
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 268 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 408
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDIL 112
Score = 71.7 bits (168), Expect = 4e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 413 QYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 511
QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 114 QYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 136 bits (330), Expect = 9e-32
Identities = 60/83 (72%), Positives = 75/83 (90%)
Frame = +1
Query: 88 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 267
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 268 VDIRVTVKGGGHVAQVYAIRQAI 336
VDIRV VKGGGHVAQ+Y Q +
Sbjct: 66 VDIRVRVKGGGHVAQIYGESQEL 88
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 110 bits (264), Expect = 9e-24
Identities = 57/106 (53%), Positives = 74/106 (69%)
Frame = +1
Query: 91 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 270
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 271 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 408
DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTL 122
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 47.2 bits (107), Expect = 9e-05
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 288
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 289 KGGGHVAQVYAIRQAISKALIAF 357
GGG AQ AIR A++KAL +F
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSF 355
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 47.2 bits (107), Expect = 9e-05
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 288
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 289 KGGGHVAQVYAIRQAISKALIAF 357
GGG AQ AIR A++KAL +F
Sbjct: 239 SGGGRSAQAGAIRLAMAKALCSF 261
>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 32.7 bits (71), Expect = 2.1
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 199 EPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDE 378
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVDV 98
Query: 379 AS-KKEIKDILXTI 417
+ + ++L TI
Sbjct: 99 MEFRDHVYELLNTI 112
>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 32.7 bits (71), Expect = 2.1
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 199 EPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDE 378
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVDV 98
Query: 379 AS-KKEIKDILXTI 417
+ + ++L TI
Sbjct: 99 MEFRDHVYELLNTI 112
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,443,686
Number of Sequences: 237096
Number of extensions: 2391238
Number of successful extensions: 4848
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4846
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13323281566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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