Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F14
         (939 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4RW30 Cluster: Chromosome 9 SCAF14991, whole genome sh...    29   0.45 
UniRef50_A1L2E9 Cluster: Putative uncharacterized protein; n=3; ...    34   4.5  
UniRef50_O00401 Cluster: Neural Wiskott-Aldrich syndrome protein...    27   6.7  
UniRef50_UPI000049834E Cluster: FH2 domain protein; n=1; Entamoe...    24   8.3  
UniRef50_UPI000049A0E6 Cluster: diaphanous protein; n=1; Entamoe...    24   8.4  

>UniRef50_Q4RW30 Cluster: Chromosome 9 SCAF14991, whole genome
           shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 9
           SCAF14991, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 1347

 Score = 29.1 bits (62), Expect(2) = 0.45
 Identities = 14/56 (25%), Positives = 16/56 (28%)
 Frame = +2

Query: 689 PPPPPPPPXXXXXXXXIXXXXXXXXXXXXXXXXXXXXXXXSXFXXXXXXXPPPPPP 856
           PPPPPPPP        +                       +         PPPPPP
Sbjct: 763 PPPPPPPPLPSALSECVCVCVCVCLSATVLSLPFFCSSILNQVMGPNIPAPPPPPP 818



 Score = 27.5 bits (58), Expect(2) = 0.45
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 677 EXXXPPPPPPPP 712
           E   PPPPPPPP
Sbjct: 756 EAPPPPPPPPPP 767


>UniRef50_A1L2E9 Cluster: Putative uncharacterized protein; n=3;
           Danio rerio|Rep: Putative uncharacterized protein -
           Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 428

 Score = 34.3 bits (75), Expect = 4.5
 Identities = 18/64 (28%), Positives = 19/64 (29%)
 Frame = +2

Query: 521 PPPPPXRGXXKXXXPXPXXXXXXXXSXXXXXXXXXXXXXXXXXXXXPXXXXXEXXXPPPP 700
           PPPPP  G      P P        S                    P     +   PPPP
Sbjct: 364 PPPPPPPGNMCIPPPPPPPPGYTGSSLPPPAPPPPQNASMAPPPPPPPPLGGKFLPPPPP 423

Query: 701 PPPP 712
           PPPP
Sbjct: 424 PPPP 427


>UniRef50_O00401 Cluster: Neural Wiskott-Aldrich syndrome protein;
           n=39; Eukaryota|Rep: Neural Wiskott-Aldrich syndrome
           protein - Homo sapiens (Human)
          Length = 505

 Score = 26.6 bits (56), Expect(2) = 6.7
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 689 PPPPPPPP 712
           PPPPPPPP
Sbjct: 376 PPPPPPPP 383



 Score = 25.8 bits (54), Expect(2) = 6.7
 Identities = 15/62 (24%), Positives = 15/62 (24%)
 Frame = +2

Query: 521 PPPPPXRGXXKXXXPXPXXXXXXXXSXXXXXXXXXXXXXXXXXXXXPXXXXXEXXXPPPP 700
           PPPPP RG      P P                             P          PPP
Sbjct: 278 PPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPP 337

Query: 701 PP 706
           PP
Sbjct: 338 PP 339


>UniRef50_UPI000049834E Cluster: FH2 domain protein; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: FH2 domain protein -
           Entamoeba histolytica HM-1:IMSS
          Length = 1212

 Score = 23.8 bits (49), Expect(3) = 8.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 689 PPPPPPP 709
           PPPPPPP
Sbjct: 636 PPPPPPP 642



 Score = 23.8 bits (49), Expect(3) = 8.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 692 PPPPPPP 712
           PPPPPPP
Sbjct: 648 PPPPPPP 654



 Score = 22.6 bits (46), Expect(3) = 8.3
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +2

Query: 521 PPPPPXRGXXKXXXPXP 571
           PPPPP  G      P P
Sbjct: 624 PPPPPPPGASSVPPPPP 640


>UniRef50_UPI000049A0E6 Cluster: diaphanous protein; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: diaphanous protein -
           Entamoeba histolytica HM-1:IMSS
          Length = 1176

 Score = 23.8 bits (49), Expect(3) = 8.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 689 PPPPPPP 709
           PPPPPPP
Sbjct: 617 PPPPPPP 623



 Score = 23.8 bits (49), Expect(3) = 8.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 692 PPPPPPP 712
           PPPPPPP
Sbjct: 629 PPPPPPP 635



 Score = 22.6 bits (46), Expect(3) = 8.4
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +2

Query: 521 PPPPPXRGXXKXXXPXP 571
           PPPPP  G      P P
Sbjct: 605 PPPPPPPGASSIPPPPP 621


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,266,679
Number of Sequences: 1657284
Number of extensions: 7857207
Number of successful extensions: 195955
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98140
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86141029997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)