Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F13
(885 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 69 1e-12
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 67 4e-12
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 60 3e-10
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 57 3e-09
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 55 2e-08
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 51 3e-07
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 49 1e-06
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 44 3e-05
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 40 5e-04
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 40 6e-04
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 37 0.003
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 36 0.008
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 34 0.023
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 68.5 bits (160), Expect = 1e-12
Identities = 34/84 (40%), Positives = 45/84 (53%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDI 560
+F+T +YHPN+D GRIC+ LK W P + PNPDDPL D+
Sbjct: 69 RFLTKIYHPNVDKLGRICLSTLKKD----WSPALQIRTVLLSIQALMGAPNPDDPLDNDV 124
Query: 561 AYEYKYNMDTFIQNAKQQTEKYAV 632
A +K N I NA++ T+KYAV
Sbjct: 125 AKIWKENEPQAIANAREWTKKYAV 148
Score = 46.4 bits (105), Expect = 5e-06
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +2
Query: 188 RIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPFE 367
RI +E++ PP GI P +D+ + + GP+ S YE G F L + +P+ YP
Sbjct: 6 RIIKEIETLTRDPPPGIVAAPTEDN-LRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMM 64
Query: 368 PP 373
PP
Sbjct: 65 PP 66
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 66.9 bits (156), Expect = 4e-12
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +3
Query: 384 FITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDIA 563
F T +YHPNI++ G IC+D+L+ W P + +PNPDDPL+ +IA
Sbjct: 69 FTTRIYHPNINSNGSICLDILR----DQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124
Query: 564 YEYKYNMDTFIQNAKQQTEKYAV 632
+ YK + + +A++ T KYA+
Sbjct: 125 HVYKTDRSRYELSAREWTRKYAI 147
Score = 50.8 bits (116), Expect = 3e-07
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +2
Query: 188 RIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPFE 367
RI RE+ + PP S P+ DD + + ++GP SPY G F L++ P YPF+
Sbjct: 5 RINRELADLGKDPPSSCSAGPVGDDLF-HWQATIMGPADSPYAGGVFFLSIHFPTDYPFK 63
Query: 368 PP 373
PP
Sbjct: 64 PP 65
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 60.5 bits (140), Expect = 3e-10
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = +2
Query: 167 LSSARAARIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSI 346
+S+ R+ R+ K + PP G+S P+ D+ + +++GP +P+E GTFKL +S
Sbjct: 1 MSTTARRRLMRDFKRMQQDPPAGVSASPVSDNVM-LWNAVIIGPADTPFEDGTFKLVLSF 59
Query: 347 PERYPFEPPL 376
E+YP +PPL
Sbjct: 60 DEQYPNKPPL 69
Score = 39.9 bits (89), Expect = 5e-04
Identities = 18/80 (22%), Positives = 36/80 (45%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDI 560
KF++ ++HPN+ G +C+D+L + W PT +PN P +
Sbjct: 71 KFVSTMFHPNVYANGELCLDIL----QNRWSPTYDVAAILTSIQSLLNDPNNASPANAEA 126
Query: 561 AYEYKYNMDTFIQNAKQQTE 620
A ++ N +++ ++ E
Sbjct: 127 AQLHRENKKEYVRRVRKTVE 146
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 57.2 bits (132), Expect = 3e-09
Identities = 27/83 (32%), Positives = 44/83 (53%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDI 560
+F T +YHPN D+ G +C+ +LK + P+I PNPDDPL+ I
Sbjct: 74 EFTTRIYHPNFDSEGNVCLAILKQQ---VFKPSIKLRSVLEQILQLLREPNPDDPLVASI 130
Query: 561 AYEYKYNMDTFIQNAKQQTEKYA 629
A +Y+ + +F + A+ E++A
Sbjct: 131 AEQYRNDRPSFDKIARDYVEQFA 153
Score = 36.7 bits (81), Expect = 0.004
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +2
Query: 170 SSARAARIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIP 349
S + + R+ +E + P I L DD + + LGP S Y G F ++ P
Sbjct: 5 SPSSSRRLTKEYSDLREHPIPDIRV-NLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFP 63
Query: 350 ERYPFEPP 373
YPF+PP
Sbjct: 64 LDYPFQPP 71
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 54.8 bits (126), Expect = 2e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +2
Query: 167 LSSARAARIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSI 346
+S R+ RIA+E+ + + GI + + DD +L + GP+G+PYE G F + + I
Sbjct: 1 MSDNRSRRIAKELADVQQDKQAGIQVWTINDD-ISHLKGMFRGPEGTPYEGGYFVVDIEI 59
Query: 347 PERYPFEPP 373
P YPF PP
Sbjct: 60 PIDYPFRPP 68
Score = 48.0 bits (109), Expect = 2e-06
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 384 FITPVYHPNIDNG-GRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDI 560
F T +YHPN+ + G IC+D+LK W P P P +P +
Sbjct: 72 FDTKIYHPNVSSQTGAICLDILK----DQWSPVYTMKSALISLQSLLCTPEPSNPQDAQV 127
Query: 561 AYEYKYNMDTFIQNAKQQTEKYA 629
A Y N F++ A++ T YA
Sbjct: 128 AQVYLQNYQQFVRTAREWTSSYA 150
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 50.8 bits (116), Expect = 3e-07
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +2
Query: 164 MLSSARAARIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVS 343
M SSA + +++K + PP G S + D V+++GP+ + YE G F T+S
Sbjct: 1 MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLS 60
Query: 344 IPERYPFEPP 373
P+ YP PP
Sbjct: 61 FPQDYPLMPP 70
Score = 39.9 bits (89), Expect = 5e-04
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMPPKG---------TWLPTIXXXXXXXXXXXXXANPN 533
KF T ++HPN+ G +C+ +L P WLP ++PN
Sbjct: 73 KFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPN 132
Query: 534 PDDPLMMDIAYEYKYNMDTFIQNAKQ 611
+ P +D A E++ N F + ++
Sbjct: 133 DESPANIDAAKEFRENPQEFKKRVRR 158
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 48.8 bits (111), Expect = 1e-06
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 167 LSSARAAR-IAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVS 343
+S A A R + +E K P GI+ P +D + ++ GP G+P+E G + T+
Sbjct: 1 MSKAMALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLK 60
Query: 344 IPERYPFEPP 373
P YP PP
Sbjct: 61 FPSDYPLGPP 70
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMP 455
KF +HPN+ G +C+ +L P
Sbjct: 73 KFECEFFHPNVYKDGTVCISILHAP 97
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 44.0 bits (99), Expect = 3e-05
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +2
Query: 188 RIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPFE 367
R+ E+ + M GIS FP D + + + GP + YE FK+++S P YP+
Sbjct: 32 RLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYS 91
Query: 368 PP 373
PP
Sbjct: 92 PP 93
Score = 37.1 bits (82), Expect = 0.003
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 384 FITPVYHPNIDNGGRICMDLLK 449
F +P++HPN+D G IC+D+LK
Sbjct: 97 FTSPMWHPNVDMSGNICLDILK 118
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 39.9 bits (89), Expect = 5e-04
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 167 LSSARAARIAREVKNFEMKPPWGISCFPLK--DDQYD--NLSVILLGPKGSPYEKGTFKL 334
+SS R+ E K + P+G P K D D N V + G + +E G +KL
Sbjct: 1 MSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKL 60
Query: 335 TVSIPERYPFEPP 373
T++ PE YP PP
Sbjct: 61 TMAFPEEYPTRPP 73
Score = 32.3 bits (70), Expect = 0.094
Identities = 17/83 (20%), Positives = 33/83 (39%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDI 560
+F P++HPN+ G +C+ +L + W P I +PN P +
Sbjct: 76 RFTPPLFHPNVYPSGTVCLSILN--EEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEA 133
Query: 561 AYEYKYNMDTFIQNAKQQTEKYA 629
+K + + + + Q + A
Sbjct: 134 YTMFKKDKVEYEKRVRAQARENA 156
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 39.5 bits (88), Expect = 6e-04
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDI 560
K + +YHPNID G +C+++L+ W P + +PN +DPL +
Sbjct: 88 KCLNKIYHPNIDIEGNVCLNILRQ----DWNPVLNLNSILVGLQFLFLSPNAEDPLNKEA 143
Query: 561 A 563
A
Sbjct: 144 A 144
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 188 RIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPFE 367
RI ++V + E+ S +P D N+ + + P Y+ G FK + I + YP +
Sbjct: 27 RIQKDVTDLEIPSTMSTS-WP--DPIKLNVLHLEIRPDEGYYKGGKFKFRIQIDDNYPHD 83
Query: 368 PP 373
PP
Sbjct: 84 PP 85
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 164 MLSSARAARIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVS 343
M S R+ +E + P + P ++ + I+ GP +PYE G + T+
Sbjct: 1 MASKGAYKRLMKEYLALQKNPVELVDAKPATENILE-WHYIITGPPDTPYEGGQYHGTLI 59
Query: 344 IPERYPFEPP 373
P YPF+PP
Sbjct: 60 FPPDYPFKPP 69
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 35.9 bits (79), Expect = 0.008
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 188 RIAREVKNFEMKPPWGISCF-PLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPF 364
R+ +E +F+ G+ P+ D + ++ GP +PYE G + L + + E YP
Sbjct: 7 RLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPI 66
Query: 365 EPP 373
PP
Sbjct: 67 SPP 69
Score = 30.7 bits (66), Expect = 0.29
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +3
Query: 384 FITPVYHPNID-NGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDI 560
F T + HPNI G +CMD+LK W P +N + PL +D
Sbjct: 73 FQTKIVHPNISWTNGEVCMDILKT----HWSPAWSLQSACLAIISLLSNYDASSPLNVDA 128
Query: 561 A 563
A
Sbjct: 129 A 129
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 34.3 bits (75), Expect = 0.023
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 384 FITPVYHPNIDN-GGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXAN-PNPDDPLMMD 557
F+ ++HPNID G +C+D++ TW P PN DPL +
Sbjct: 68 FVNRIFHPNIDELSGSVCLDVINQ----TWSPMFDMINIFEVFLPQLLRYPNASDPLNGE 123
Query: 558 IAYEYKYNMDTFIQNAKQQTEKYA 629
A +T+ + +YA
Sbjct: 124 AAALLLREPNTYYAKVRDYIARYA 147
Score = 33.5 bits (73), Expect = 0.041
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 251 LKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPFEPP 373
L +D V GP +PY G +K+ V +P YP++ P
Sbjct: 24 LVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSP 64
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,484,237
Number of Sequences: 5004
Number of extensions: 47811
Number of successful extensions: 116
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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