Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F13
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 70 3e-12
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 67 1e-11
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 67 1e-11
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 56 3e-08
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 54 2e-07
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 54 2e-07
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 50 2e-06
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 47 2e-05
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 44 1e-04
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 44 1e-04
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 43 3e-04
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 42 8e-04
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 41 0.001
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 40 0.002
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 37 0.017
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 35 0.089
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 34 0.12
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 33 0.21
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 33 0.36
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 32 0.63
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 32 0.63
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 31 0.83
Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical pr... 28 7.7
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 69.7 bits (163), Expect = 3e-12
Identities = 34/83 (40%), Positives = 46/83 (55%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDI 560
+F+T +YHPNID GRIC+D+L K W P + + PNP+DPL D+
Sbjct: 71 RFMTKIYHPNIDKLGRICLDIL----KDKWSPALQIRTVLLSIQALLSAPNPEDPLATDV 126
Query: 561 AYEYKYNMDTFIQNAKQQTEKYA 629
A ++K N I+ AKQ T YA
Sbjct: 127 AEQWKTNEAEAIKTAKQWTMNYA 149
Score = 41.5 bits (93), Expect = 8e-04
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 188 RIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPFE 367
RI +E + P GIS P + V++ GP SP+ G FKL + +PE YP
Sbjct: 8 RIIKETQRLLADPVPGISANP-DESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66
Query: 368 PP 373
P
Sbjct: 67 AP 68
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/83 (37%), Positives = 48/83 (57%)
Frame = +3
Query: 384 FITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDIA 563
F T +YHPNI++ G IC+D+L+ W P + +PNPDDPL+ +IA
Sbjct: 69 FTTRIYHPNINSNGSICLDILR----SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIA 124
Query: 564 YEYKYNMDTFIQNAKQQTEKYAV 632
YK + + + Q A++ T+KYA+
Sbjct: 125 RIYKTDRERYNQLAREWTQKYAM 147
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +2
Query: 188 RIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPFE 367
RI +E+++ PP S P+ DD + + ++GP SPY+ G F LT+ P YPF+
Sbjct: 5 RIQKELQDLGRDPPAQCSAGPVGDDLF-HWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 368 PP 373
PP
Sbjct: 64 PP 65
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/83 (37%), Positives = 48/83 (57%)
Frame = +3
Query: 384 FITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDIA 563
F T +YHPNI++ G IC+D+L+ W P + +PNPDDPL+ +IA
Sbjct: 69 FTTRIYHPNINSNGSICLDILR----SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIA 124
Query: 564 YEYKYNMDTFIQNAKQQTEKYAV 632
YK + + + Q A++ T+KYA+
Sbjct: 125 RIYKTDRERYNQLAREWTQKYAM 147
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +2
Query: 188 RIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPFE 367
RI +E+++ PP S P+ DD + + ++GP SPY+ G F LT+ P YPF+
Sbjct: 5 RIQKELQDLGRDPPAQCSAGPVGDDLF-HWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 368 PP 373
PP
Sbjct: 64 PP 65
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +2
Query: 167 LSSARAARIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSI 346
L+ AR R +EV N GI +K++ ++ + GP+G+PY GTF++ V I
Sbjct: 18 LALARVTRKCKEVANASDITEAGIHV-EIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDI 76
Query: 347 PERYPFEPP 373
PE YPFEPP
Sbjct: 77 PEHYPFEPP 85
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 381 KFITPVYHPNIDN-GGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMD 557
KF+T ++HPNI + G IC+D+L K W ++ +P P DP
Sbjct: 103 KFVTRIWHPNISSQTGTICLDIL----KDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAV 158
Query: 558 IAYEYKYNMDTFIQNAKQQTEKYA 629
+A ++ N F A T +A
Sbjct: 159 VAKQFINNYPMFTATAVYWTSYFA 182
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +2
Query: 188 RIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPFE 367
R+ R+ K + PP G+S P +D+ I+ GP+ +P+E GTFKL++ E YP +
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTEDNIL-TWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 368 PP 373
PP
Sbjct: 67 PP 68
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDI 560
KFI+ ++HPN+ G IC+D+L + W PT PNP+ P
Sbjct: 71 KFISKMFHPNVYADGSICLDIL----QNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLA 126
Query: 561 AYEYKYNMDTFIQNAKQQTEK 623
A Y+ N + + +Q E+
Sbjct: 127 AQLYQENRREYEKRVQQIVEQ 147
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +2
Query: 188 RIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPFE 367
R+ R+ K + PP G+S P +D+ I+ GP+ +P+E GTFKL++ E YP +
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTEDNIL-TWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 368 PP 373
PP
Sbjct: 67 PP 68
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDI 560
KFI+ ++HPN+ G IC+D+L + W PT PNP+ P
Sbjct: 71 KFISKMFHPNVYADGSICLDIL----QNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLA 126
Query: 561 AYEYKYNMDTFIQNAKQQTEK 623
A Y+ N + + +Q E+
Sbjct: 127 AQLYQENRREYEKRVQQIVEQ 147
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +3
Query: 384 FITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDIA 563
F T +YHPN+D G+ C+ ++ W P P P P+ D+A
Sbjct: 70 FETKIYHPNVDEEGKFCLPIVTAE---NWKPATKTEQVMMALLSLINEPEPSHPIRADVA 126
Query: 564 YEYKYNMDTFIQNAKQQTEKYA 629
E++ + F++ A++ T K+A
Sbjct: 127 EEFQKDHKKFMKTAEEHTRKHA 148
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 284 ILLGPKGSPYEKGTFKLTVSIPERYPFEPP 373
+LL P PY KG FK+ ++ P YPF+PP
Sbjct: 37 VLLIPDKEPYNKGAFKVGITFPVDYPFKPP 66
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 47.2 bits (107), Expect = 2e-05
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 188 RIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPFE 367
R+ E K +PP GI P+ +D + ++ GP+ + + G F ++ P+ YP
Sbjct: 8 RLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPLS 67
Query: 368 PP 373
PP
Sbjct: 68 PP 69
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 9/90 (10%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMP---PKG------TWLPTIXXXXXXXXXXXXXANPN 533
+F ++HPNI GR+C+ +L P P G W P A PN
Sbjct: 72 RFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSMLAEPN 131
Query: 534 PDDPLMMDIAYEYKYNMDTFIQNAKQQTEK 623
+ P + A ++ + F + A K
Sbjct: 132 DESPANVSAAKMWREDRAQFEKIADSLVRK 161
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = +3
Query: 342 LSRKDIRSSLL*XKFITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXX 521
L + D S+ KF P++HPN+ G +C+ LL W P+I
Sbjct: 63 LFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLL--DENKDWKPSISIKQLLIGIQDLL 120
Query: 522 ANPNPDDPLMMDIAYEYKYNMDTFIQNAKQQTEKYA 629
+PN +DP + Y N + + K++ KYA
Sbjct: 121 NHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 167 LSSARAARIAREVKNFEMKPPWGISCFPLKD-DQYDNL---SVILLGPKGSPYEKGTFKL 334
+S A R+A E K++ P+G P+K+ D NL + G K + +E G +++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 335 TVSIPERYPFEPP 373
+ + +P PP
Sbjct: 61 RMLFKDDFPSTPP 73
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = +3
Query: 342 LSRKDIRSSLL*XKFITPVYHPNIDNGGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXX 521
L + D S+ KF P++HPN+ G +C+ LL W P+I
Sbjct: 63 LFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLL--DENKDWKPSISIKQLLIGIQDLL 120
Query: 522 ANPNPDDPLMMDIAYEYKYNMDTFIQNAKQQTEKYA 629
+PN +DP + Y N + + K++ KYA
Sbjct: 121 NHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 167 LSSARAARIAREVKNFEMKPPWGISCFPLKD-DQYDNL---SVILLGPKGSPYEKGTFKL 334
+S A R+A E K++ P+G P+K+ D NL + G K + +E G +++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 335 TVSIPERYPFEPP 373
+ + +P PP
Sbjct: 61 RMLFKDDFPSTPP 73
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 149 ISSNTMLSSARAARIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTF 328
+ S SS + E+KN + +P G + + +D +V + GP + Y+ G F
Sbjct: 1 MDSKASTSSGALRALTMELKNLQSQPVEGFT-IDVNEDNLFVWTVGIYGPPKTLYQGGYF 59
Query: 329 KLTVSIPERYPFEPP 373
K ++ P YP+ PP
Sbjct: 60 KASIRFPSNYPYSPP 74
Score = 33.1 bits (72), Expect = 0.27
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMP---PKG------TWLPTIXXXXXXXXXXXXXANPN 533
KF T V+HPN+ G +C+ +L P P+ W PT PN
Sbjct: 77 KFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLSVISLLNEPN 136
Query: 534 PDDPLMMDIAYEY-KYNMDTFIQNAKQQTEK 623
P +D + Y K+ D + AK T++
Sbjct: 137 TSSPANVDASVMYRKWKEDQDPEYAKIVTKQ 167
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 41.5 bits (93), Expect = 8e-04
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 179 RAARIAREVKNFEMKPPWGIS--CFPLKDD-QYDNLSVILLGPKGSPYEKGTFKLTVSIP 349
R RIA+E+ + P S + D+ + D + V++ GP +PY G F+ + P
Sbjct: 410 RTKRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFP 469
Query: 350 ERYPFEPP 373
YPF PP
Sbjct: 470 TGYPFSPP 477
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMP---------PKGTWLPTIXXXXXXXXXXXXXANPN 533
KFI+ ++HPNID G +C+ +L P P+ WLP +PN
Sbjct: 71 KFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPN 130
Query: 534 PDDPLMMDIAYEYKYNMDTFIQNAKQ 611
+ P +D A + N F + Q
Sbjct: 131 FESPANVDAAKMQRENYAEFKKKVAQ 156
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +2
Query: 191 IAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSIPERYPFEP 370
+ +++ + P G S + D+ V+++GP + YE G FK + P YP +P
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 371 P 373
P
Sbjct: 68 P 68
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 381 KFITPVYHPNIDNG-GRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMD 557
KF T ++HPN+ + G IC+D+LK W ++ P P DP
Sbjct: 74 KFSTKIWHPNVSSQTGVICLDILK----DQWAASLTLRTVLLSIQALMCTPEPKDPQDAV 129
Query: 558 IAYEYKYNMDTFIQNAKQQTEKYA 629
+A +Y F A+ T K+A
Sbjct: 130 VAKQYMEKPAVFKATAEYWTTKFA 153
Score = 39.1 bits (87), Expect = 0.004
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 293 GPKGSPYEKGTFKLTVSIPERYPFEPP 373
GP +PY G F L + IP++YPF PP
Sbjct: 45 GPPDTPYAGGMFDLDIKIPDQYPFSPP 71
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 37.1 bits (82), Expect = 0.017
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 293 GPKGSPYEKGTFKLTVSIPERYPFEPP 373
GPK + YE G +++ V +P++YPF+ P
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSP 67
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 384 FITPVYHPNIDN-GGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMDI 560
F+ ++HPNID G +C+D++ + T PN DPL +
Sbjct: 71 FLNKIFHPNIDEASGTVCLDVINQAWTALYDLT---NIFDTFLPQLLTYPNAADPLNGEA 127
Query: 561 AYEYKYNMDTFIQNAKQQTEKYA 629
A Y + + + + ++ ++A
Sbjct: 128 ARLYIHKPEEYRRTCREYVMRFA 150
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 34.7 bits (76), Expect = 0.089
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 284 ILLGPKGSPYEKGTFKLTVSIPERYPFEPP 373
I+ G + +PYE G F+L + I E YPF+ P
Sbjct: 384 IIKGVEETPYEGGIFELDIKIGESYPFKAP 413
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 381 KFITPVYHPNIDN-GGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMD 557
KFIT ++HP++ G IC L G W ++ +N N +P+ ++
Sbjct: 416 KFITKIWHPSVSPFDGTIC---LHDVDNGVWPVSMTIYKVLIVIQSWMSNFNEKEPIDVE 472
Query: 558 IAYEYKYNMDTFIQNAKQQTEKYA 629
I + N + F + A+ T+++A
Sbjct: 473 ILEQATNNREVFEKTAEFWTKRFA 496
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 188 RIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVS 343
RI +E+ + PP S + DD Y + ++GP SPY+ G F LT++
Sbjct: 5 RIQKELHDLGRDPPAQCSTGSVGDDLY-HWQATIMGPPESPYQGGIFFLTIT 55
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 381 KFITPVYHPNIDN-GGRICMDLLKMPPKGTWLPTIXXXXXXXXXXXXXANPNPDDPLMMD 557
KF VYHPN+D +C +L + W P P+ P+ +D
Sbjct: 80 KFCHNVYHPNVDPVTCELCSPMLL---QENWKPETTMEDVLLNLIVLLNEPDLSRPVNID 136
Query: 558 IAYEYKYNMDTFIQNAKQQTEKY 626
A++Y +N F++ + + +K+
Sbjct: 137 AAHDYIHNKVEFVKKSTELAKKW 159
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +2
Query: 167 LSSARAARIAREVKNFEMKPPWGISCFPLKDDQYDNLSVILLGPKGSPYEKGTFKLTVSI 346
+S+ R+ ++ + +P + PL+ + + +I+ PK +PYE G + +
Sbjct: 5 VSTVALQRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPK-TPYEGGIYMGKLLF 63
Query: 347 PERYPFEPP 373
P+ +PF+PP
Sbjct: 64 PKDFPFKPP 72
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 31.9 bits (69), Expect = 0.63
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 164 MLSSARAARIAREVKNFEMKPPWGISCFPLKDDQYDNLS---VILLGPKGSPYEKGTFKL 334
M+ R R+ E++ + G + L+DD L+ ++GP +PYE + L
Sbjct: 1 MVDVPRNFRLLEELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNL 60
Query: 335 TVSIPERYPFEPP 373
+ YP EPP
Sbjct: 61 QIQCGGNYPREPP 73
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 381 KFITPVYHPNIDNGGRICMDLLKMP--PKGTWLPT 479
K +T V+HPNI+ G IC+ +L+ + W PT
Sbjct: 95 KCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPT 129
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 31.9 bits (69), Expect = 0.63
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 287 LLGPKGSPYEKGTFKLTVSIPERYP 361
+ GP +PYE G F++ ++ P+ YP
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYP 59
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 191 IAREVKNFEMKPPWGISCFPLKDDQYD---NLSVILLGPKGSPYEKGTFKLTVSIPERYP 361
+ E ++ + P G + P+ + D + + GP+GSP+E G ++++V+ ++P
Sbjct: 40 VKEEKAKWDERTPQGYTAKPISFEGADIWCSWICTVPGPRGSPWEGGEYEVSVNF-HKWP 98
Query: 362 FEPPL 376
PP+
Sbjct: 99 IIPPI 103
>Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical
protein C17D12.5 protein.
Length = 139
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 284 ILLGPKGSPYEKGTFKLTVSIPERYPFEPP 373
+ L G PY + + +TV+IP ++PF PP
Sbjct: 39 VTLKTYGPPYTE--YIVTVAIPPKFPFSPP 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,791,323
Number of Sequences: 27780
Number of extensions: 271658
Number of successful extensions: 535
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -