Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F10
         (872 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   3.0  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   5.3  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   7.0  
AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    24   7.0  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    23   9.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.2  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 566 VVSMIWPTQLPVWWQIPSERP 628
           +VS ++PT  PV W + S+ P
Sbjct: 459 IVSDLFPTHPPVSWPVSSDAP 479


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -2

Query: 529  SRSRGTRCIQSAGSTRSRRCTLTASTMETSRR*NRKSTPR*KNR 398
            SRSR     QSAGS +S   + + S  + SR  +R+S  R ++R
Sbjct: 1128 SRSRSRSRSQSAGSRKSGSRSRSRSGSQASRG-SRRSRSRSRSR 1170


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 219 LYIFLGLVAFTGLYL 263
           LY+ +GLV+ TG Y+
Sbjct: 14  LYVLIGLVSSTGFYI 28


>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 493 LPTEYNGSL--VIYYRIIRPYYQKHHGRIDDMANTASRLVADTIRK 624
           LP ++ G+L  VI   I+  ++QKHH       N A   + D + K
Sbjct: 39  LPYDF-GALEPVICREIMELHHQKHHNAYVTNLNAAEEQLQDAVAK 83


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -3

Query: 183 NISSMACFCRSDFVLCCLYTLVIWMPLC 100
           N+    CFC+ ++V   +    IW   C
Sbjct: 66  NVCVAGCFCKKNYVRRAIGGSCIWAKKC 93


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 313  TPRYMSMKALESPQKDDDTK 372
            TPRY++ K +  P   ++TK
Sbjct: 1097 TPRYVNRKGVALPTSSEETK 1116


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 864,004
Number of Sequences: 2352
Number of extensions: 17887
Number of successful extensions: 80
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)