Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F09
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938     30   2.2  
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    30   2.2  
10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266     29   5.1  
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119     29   6.8  

>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
          Length = 331

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +1

Query: 550 FFFFFFFFXXHXXTPXXFFFFF 615
           FFFFFFFF         FFFFF
Sbjct: 62  FFFFFFFFFFFFFFFFFFFFFF 83



 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +1

Query: 550 FFFFFFFFXXHXXTPXXFFFFF 615
           FFFFFFFF         FFFFF
Sbjct: 63  FFFFFFFFFFFFFFFFFFFFFF 84



 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +1

Query: 550 FFFFFFFFXXHXXTPXXFFFFF 615
           FFFFFFFF         FFFFF
Sbjct: 64  FFFFFFFFFFFFFFFFFFFFFF 85



 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +1

Query: 550 FFFFFFFFXXHXXTPXXFFFFF 615
           FFFFFFFF         FFFFF
Sbjct: 65  FFFFFFFFFFFFFFFFFFFFFF 86


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +1

Query: 550 FFFFFFFFXXHXXTPXXFFFFF 615
           FFFFFFFF         FFFFF
Sbjct: 87  FFFFFFFFFFFFFFFFFFFFFF 108


>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
          Length = 60

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/28 (53%), Positives = 15/28 (53%)
 Frame = -2

Query: 634 GGXXXXXKKKKKXXGXXXGXKKKKKKKK 551
           GG     KKKKK        KKKKKKKK
Sbjct: 21  GGLRGLPKKKKKKKKKKKKKKKKKKKKK 48


>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
          Length = 440

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -2

Query: 613 KKKKKXXGXXXGXKKKKKKKKXXXXXXFF 527
           KKKKK        KKKKKKKK      FF
Sbjct: 379 KKKKKKKKKKKKKKKKKKKKKLRFVMIFF 407


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,999,866
Number of Sequences: 37544
Number of extensions: 119732
Number of successful extensions: 421
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)