Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F08
         (830 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IU42 Cluster: Formin homology protein A; n=2; Dictyos...    36   1.2  
UniRef50_Q6CAD9 Cluster: Similarity; n=1; Yarrowia lipolytica|Re...    34   5.0  
UniRef50_Q6C9I8 Cluster: Similar to sp|P41832 Saccharomyces cere...    34   5.0  
UniRef50_A1SEF2 Cluster: Putative uncharacterized protein; n=1; ...    33   8.8  
UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14; Fungi/M...    33   8.8  
UniRef50_P48608 Cluster: Protein diaphanous; n=5; Endopterygota|...    33   8.8  

>UniRef50_Q8IU42 Cluster: Formin homology protein A; n=2;
           Dictyostelium discoideum|Rep: Formin homology protein A
           - Dictyostelium discoideum (Slime mold)
          Length = 1218

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 19/54 (35%), Positives = 19/54 (35%)
 Frame = -1

Query: 404 PPXPXXXXXKKXGGPXSXKXFXXGXPPXXXXPXPXGLXGPPPXXFFFGFXXPPP 243
           PP P        GGP        G PP    P      GPPP    FG   PPP
Sbjct: 692 PPPPPPPPPMTGGGPPPPPPPPGGGPPPPPPPPGAKAGGPPPPPPPFGKGPPPP 745


>UniRef50_Q6CAD9 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
           Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 1130

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 21/66 (31%), Positives = 23/66 (34%)
 Frame = -1

Query: 413 FXXPPXPXXXXXKKXGGPXSXKXFXXGXPPXXXXPXPXGLXGPPPXXFFFGFXXPPPXXV 234
           F  PP P        G P        G PP    P P    GPPP  +  G   PPP   
Sbjct: 729 FQGPPPPGWHGPPGHGPPPPG---WQGPPPGWHGPPPGQFHGPPPPGWAPG-HPPPPGWA 784

Query: 233 PNXGXF 216
           P  G +
Sbjct: 785 PPPGYY 790


>UniRef50_Q6C9I8 Cluster: Similar to sp|P41832 Saccharomyces
            cerevisiae YNL271c BNI1 regulator of budding; n=1;
            Yarrowia lipolytica|Rep: Similar to sp|P41832
            Saccharomyces cerevisiae YNL271c BNI1 regulator of
            budding - Yarrowia lipolytica (Candida lipolytica)
          Length = 1851

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 19/53 (35%), Positives = 19/53 (35%)
 Frame = -1

Query: 404  PPXPXXXXXKKXGGPXSXKXFXXGXPPXXXXPXPXGLXGPPPXXFFFGFXXPP 246
            PP P        GGP        G PP    P P G  G PP   F G   PP
Sbjct: 1045 PPPPPPPPPMFTGGPPP---MFTGGPPPPPPPPPPGFTGGPPPPGFTGGPPPP 1094


>UniRef50_A1SEF2 Cluster: Putative uncharacterized protein; n=1;
           Nocardioides sp. JS614|Rep: Putative uncharacterized
           protein - Nocardioides sp. (strain BAA-499 / JS614)
          Length = 282

 Score = 33.1 bits (72), Expect = 8.8
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -1

Query: 329 PPXXXXPXPXGLXGPPPXXFFFGFXXPPPXXVPNXG 222
           PP    P   G  GPPP    +G   PPP   P+ G
Sbjct: 14  PPPLPPPSGDGYGGPPPPTGGYGENPPPPPPAPSYG 49


>UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14;
            Fungi/Metazoa group|Rep: Cytokinesis protein sepA -
            Emericella nidulans (Aspergillus nidulans)
          Length = 1790

 Score = 33.1 bits (72), Expect = 8.8
 Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = -1

Query: 335  GXPPXXXXPXPXGLXG-PPPXXFFFGFXXPPPXXVPNXG 222
            G PP    P P G  G PPP     GF  PPP   P  G
Sbjct: 1067 GPPPPPPPPPPGGFGGPPPPPPPPGGFGGPPPPPPPPPG 1105


>UniRef50_P48608 Cluster: Protein diaphanous; n=5;
           Endopterygota|Rep: Protein diaphanous - Drosophila
           melanogaster (Fruit fly)
          Length = 1091

 Score = 33.1 bits (72), Expect = 8.8
 Identities = 18/58 (31%), Positives = 19/58 (32%)
 Frame = -1

Query: 404 PPXPXXXXXKKXGGPXSXKXFXXGXPPXXXXPXPXGLXGPPPXXFFFGFXXPPPXXVP 231
           PP P          P        G PP    P P    GPPP     G   PPP  +P
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPGMGGPPPPPMP 572


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 299,336,967
Number of Sequences: 1657284
Number of extensions: 5154944
Number of successful extensions: 8659
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7573
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72143915536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)