Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F07
(890 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982 33 0.23
07_03_1136 + 24218601-24218734,24218769-24219906 32 0.53
12_01_0252 + 1868670-1869200,1870167-1871120 31 1.2
11_01_0252 + 1934505-1935032,1936001-1936957 31 1.2
01_03_0005 + 11568545-11569119,11569179-11569191 31 1.6
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 30 2.1
04_04_0009 + 22134160-22134696 30 2.8
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 29 3.8
07_01_0907 - 7636725-7637681 29 3.8
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.8
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 5.0
11_06_0292 - 22015603-22015716,22015774-22016163 29 6.6
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 29 6.6
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 29 6.6
10_07_0134 + 13289641-13290216,13290435-13290914 28 8.7
06_03_1414 + 30012195-30012360,30012448-30012830 28 8.7
04_03_0833 + 20147242-20147849,20147937-20148081,20148157-201482... 28 8.7
04_03_0212 + 12697854-12698549,12698655-12698930,12698991-126990... 28 8.7
03_01_0538 - 4038954-4039444,4040172-4040248,4040838-4040911,404... 28 8.7
01_01_1108 + 8758486-8758815,8758913-8758960,8761512-8761664,876... 28 8.7
>01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982
Length = 301
Score = 33.5 bits (73), Expect = 0.23
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 6/55 (10%)
Frame = -3
Query: 600 PPXXXGXXXPPXXGGVXPPPPXXXXPXFXXGGG------GGGAXKXXPXXPGGGG 454
P G P GG PP P GGG GGGA P P GGG
Sbjct: 101 PSPSHGGAAPSHGGGYGASPPVTPSPGGGYGGGSPAPSHGGGAYGSSPSTPSGGG 155
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -3
Query: 600 PPXXXGXXXPPXXGGVXPPPPXXXXPXFXXGGGGGGAXKXXPXXPGGGG 454
PP G P GG PP GGGGGG P GGGG
Sbjct: 91 PPGGGGAPGPLGGGGARPP----------GGGGGGGPPSLPPGAGGGGG 129
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 8/56 (14%)
Frame = -3
Query: 597 PXXXGXXXPPXXGGVXPPPPXXXX--------PXFXXGGGGGGAXKXXPXXPGGGG 454
P G PP GG PP P GGGGGGA + GGGG
Sbjct: 100 PLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGG 155
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 11/59 (18%)
Frame = -3
Query: 600 PPXXXGXXXPPXX-------GGVXPPPPXXXX----PXFXXGGGGGGAXKXXPXXPGGG 457
PP G PP GG PP P P GGGGGG P PGGG
Sbjct: 108 PPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARP--PGGG 164
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 510 GGGGGGAXKXXPXXPGGGG 454
GGGGGGA K GGGG
Sbjct: 239 GGGGGGALKRAAGSGGGGG 257
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 510 GGGGGGAXKXXPXXPGGGG 454
GGGGGGA K GGGG
Sbjct: 225 GGGGGGALKCVVGGGGGGG 243
>12_01_0252 + 1868670-1869200,1870167-1871120
Length = 494
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 549 PPPPXXXXPXFXXGGGGGGAXKXXPXXPGGGG 454
PPPP P GGGGGG+ GGGG
Sbjct: 66 PPPPPLNWPT--AGGGGGGSGGGGRGGAGGGG 95
>11_01_0252 + 1934505-1935032,1936001-1936957
Length = 494
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 549 PPPPXXXXPXFXXGGGGGGAXKXXPXXPGGGG 454
PPPP P GGGGGG+ GGGG
Sbjct: 65 PPPPPLNWPM--AGGGGGGSGGGGRGGAGGGG 94
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 6/54 (11%)
Frame = -3
Query: 597 PXXXGXXXPPXXGGVXPPPPXXXXPXFXXGGGGGGA------XKXXPXXPGGGG 454
P PP V P P P + GGGGGG P GGGG
Sbjct: 49 PCNPSYYPPPPPPVVTPTPQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGG 102
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -3
Query: 570 PXXGGVXPPPPXXXXPXFXXG-GGGGGAXKXXP 475
P G PPPP P G GGGGGA P
Sbjct: 21 PRRGDHSPPPPLPPPPASQVGAGGGGGAASPQP 53
>04_04_0009 + 22134160-22134696
Length = 178
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 561 GGVXPPPPXXXXPXFXXGGGGGGAXKXXPXXPGGGG 454
GG PPP GGGGG + GGGG
Sbjct: 59 GGSTAPPPPPPSSSGKSGGGGGSNIREAAASGGGGG 94
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 546 PPPXXXXPXFXXGGGGGGAXKXXPXXPGGGG 454
P P GGGGGG PGGGG
Sbjct: 82 PSPPFPSGNTRGGGGGGGGSSMQQQQPGGGG 112
>07_01_0907 - 7636725-7637681
Length = 318
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 561 GGVXPPPPXXXXPXFXXGGGGGGAXKXXPXXPGGGG 454
GGV PP F GGGGG GGGG
Sbjct: 109 GGVMAPPHAQLQLPFGFDGGGGGGHGSIIGGGGGGG 144
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 600 PPXXXGXXXPPXXGGVXPPPPXXXXPXFXXGGGGGGAXKXXPXXPGGG 457
PP G PP G PPPP GG P P GG
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 549 PPPPXXXXPXFXXGGGGGGAXKXXPXXP 466
PPPP P GGGGG + P P
Sbjct: 12 PPPPQHPPPPQAGGGGGGEFYRGPPPQP 39
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 549 PPPPXXXXPXFXXGGGGGGAXKXXP 475
PPPP P GGGGGG P
Sbjct: 11 PPPPPQHPPPPQAGGGGGGEFYRGP 35
>11_06_0292 - 22015603-22015716,22015774-22016163
Length = 167
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 510 GGGGGGAXKXXPXXPGGGG 454
GGGGGG + P GGGG
Sbjct: 56 GGGGGGGEEEEPRIGGGGG 74
>09_06_0172 +
21329904-21331512,21331595-21331740,21332333-21332556,
21333689-21334448
Length = 912
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = -3
Query: 600 PPXXXGXXXPPXXGGVXPPPPXXXXPXFXXGG----GGGGAXKXXPXXPGGGG 454
PP G PP G PPPP + G GGG A PG GG
Sbjct: 161 PPPQMGPP-PPYGSGYAPPPPYGSGYGYGYGPAPDYGGGMAVANGGYDPGYGG 212
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -3
Query: 585 GXXXPPXXGGVXPPPPXXXXPXFXXGGGGGGAXKXXPXXPGGGG 454
G PP GG P P P GGGGGG P GG G
Sbjct: 13 GLDQPPAGGG-GGPAPHSSDPGGVGGGGGGGG----PGDGGGHG 51
>10_07_0134 + 13289641-13290216,13290435-13290914
Length = 351
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 546 PPPXXXXPXFXXGGGGGGAXKXXPXXPGGGG 454
PPP GGGGG A + GGGG
Sbjct: 67 PPPPMYEASGGDGGGGGAASEDEEDGCGGGG 97
>06_03_1414 + 30012195-30012360,30012448-30012830
Length = 182
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 538 GGGGXXPPPXGGXXXPPXXXGXXKKK 615
GGGG PPP G PP G + +
Sbjct: 135 GGGGGSPPPSGVPLHPPAAGGAGRSQ 160
>04_03_0833 +
20147242-20147849,20147937-20148081,20148157-20148210,
20148297-20148388,20148957-20149093,20149210-20149464,
20149598-20149771,20149863-20149960
Length = 520
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 510 GGGGGGAXKXXPXXPGGGG 454
GGGGGGA K GGGG
Sbjct: 46 GGGGGGAGKKGRGGGGGGG 64
>04_03_0212 +
12697854-12698549,12698655-12698930,12698991-12699038,
12699659-12699715,12700965-12701163,12702267-12702373,
12702586-12702759,12702844-12703083,12703638-12703693,
12704499-12704622
Length = 658
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/54 (31%), Positives = 20/54 (37%)
Frame = -3
Query: 600 PPXXXGXXXPPXXGGVXPPPPXXXXPXFXXGGGGGGAXKXXPXXPGGGGXFFSQ 439
PP P + PPP GGGGGG GGGG ++ Q
Sbjct: 25 PPPTSAPRLPRLAANLSRPPPLAISSPGCDGGGGGGGG-------GGGGGWWRQ 71
>03_01_0538 -
4038954-4039444,4040172-4040248,4040838-4040911,
4041115-4041203,4041481-4041563,4041645-4042233,
4042915-4043101
Length = 529
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -3
Query: 600 PPXXXGXXXPPXXGG-VXPPPPXXXXPXFXXGGGGGG 493
PP PP + PP P P + GGGGGG
Sbjct: 153 PPQQDHIFLPPHGQYFLGPPNPMAPAPMYNAGGGGGG 189
>01_01_1108 +
8758486-8758815,8758913-8758960,8761512-8761664,
8761749-8761847,8761884-8761991,8762078-8762200,
8763030-8763287
Length = 372
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 510 GGGGGGAXKXXPXXPGGGG 454
GGGGGG P GGGG
Sbjct: 6 GGGGGGGVMAGPGVAGGGG 24
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.150 0.516
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,979,997
Number of Sequences: 37544
Number of extensions: 307320
Number of successful extensions: 2819
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2404
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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