Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F06
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0507 + 3655570-3655573,3655648-3655832                           50   2e-06
04_04_0165 + 23247265-23247472,23248115-23248407,23249182-232492...    34   0.17 
01_07_0064 + 40834649-40834786,40834934-40834997,40835333-408353...    32   0.53 
02_02_0664 - 12747888-12747900,12748161-12748229,12748332-127483...    30   2.8  
08_01_0648 + 5602454-5602513,5602913-5603000,5603128-5604248,560...    29   4.9  
08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058           29   6.5  

>06_01_0507 + 3655570-3655573,3655648-3655832
          Length = 62

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = -2

Query: 91 GKVHGSLARAGKVKGQTPKVEKQLKK 14
          GKVHGSLARAGKV+GQTPKV KQ KK
Sbjct: 2  GKVHGSLARAGKVRGQTPKVAKQDKK 27


>04_04_0165 +
           23247265-23247472,23248115-23248407,23249182-23249239,
           23249302-23250014
          Length = 423

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 284 RAIDTRPGRQWPGVHWSDQGTHSYSCCSW**RPYSIIMWS 165
           +A+  RP    PG+HW++Q    YS CS    P  I MW+
Sbjct: 368 KAMSMRPDAH-PGIHWNNQWMRGYSDCSHWCLPGPIDMWN 406


>01_07_0064 +
           40834649-40834786,40834934-40834997,40835333-40835391,
           40835602-40835677,40835775-40835846,40837641-40837728,
           40838239-40838497,40838766-40839000,40839447-40839470,
           40839910-40839997,40840110-40840300,40841082-40841322,
           40841803-40842556
          Length = 762

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 24/70 (34%), Positives = 32/70 (45%)
 Frame = +1

Query: 391 YKGFCRFRPIG*KMS*FNKNLTRILTKY*RLQFRWHFSGKCARNPYLFIFLNTFKYVSAH 570
           Y GF + R +    S F KN T  LTK+ ++     FSG  A  P     L+T  Y   H
Sbjct: 418 YSGFLKNREMDVDQSKFKKNQTEFLTKFDQI-----FSGIWAGRPASACNLHTTTYTLMH 472

Query: 571 ETITLINASI 600
              T ++ SI
Sbjct: 473 PQETNVDESI 482


>02_02_0664 -
           12747888-12747900,12748161-12748229,12748332-12748395,
           12749540-12749558,12749777-12749843,12749934-12749953,
           12750079-12750248,12751646-12751823
          Length = 199

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 260 RQWPGVHWSDQGTHSY 213
           R WPG+HWSD  T  Y
Sbjct: 51  RIWPGLHWSDSSTPLY 66


>08_01_0648 +
           5602454-5602513,5602913-5603000,5603128-5604248,
           5605146-5605217,5605218-5605373,5605458-5605748
          Length = 595

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 669 FAFLFLLTQKRW*K*KMLKISWVHEWVTSNWISTAVR 779
           F    LL ++ +   K L++ W H+   +NWI+ AVR
Sbjct: 144 FVTTMLLRRRPFAPIKALRLCWSHDGDANNWIAHAVR 180


>08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058
          Length = 484

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 669 FAFLFLLTQKRW*K*KMLKISWVHEWVTSNWISTAVR 779
           F    LL ++ +   K L++ W H+   +NWI+ AVR
Sbjct: 92  FVDTLLLRRRPFAPIKALRLCWSHDGDANNWIAHAVR 128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,023,712
Number of Sequences: 37544
Number of extensions: 468094
Number of successful extensions: 1181
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)