Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F06
(881 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X65923-1|CAA46716.1| 133|Homo sapiens fau protein. 84 6e-16
X65921-1|CAA46714.1| 133|Homo sapiens fau 1 protein. 84 6e-16
CR541974-1|CAG46772.1| 133|Homo sapiens FAU protein. 84 6e-16
BC033877-1|AAH33877.1| 133|Homo sapiens Finkel-Biskis-Reilly mu... 84 6e-16
AY398663-1|AAQ87877.1| 133|Homo sapiens Finkel-Biskis-Reilly mu... 84 6e-16
AK026639-1|BAB15515.1| 133|Homo sapiens protein ( Homo sapiens ... 84 6e-16
U60800-1|AAC50810.1| 862|Homo sapiens semaphorin protein. 33 1.0
BC054500-1|AAH54500.1| 862|Homo sapiens sema domain, immunoglob... 33 1.0
AL929575-4|CAI43250.2| 862|Homo sapiens sema domain, immunoglob... 33 1.0
AL590233-3|CAI17379.2| 862|Homo sapiens sema domain, immunoglob... 33 1.0
AB210030-1|BAE06112.1| 870|Homo sapiens SEMA4D variant protein ... 33 1.0
>X65923-1|CAA46716.1| 133|Homo sapiens fau protein.
Length = 133
Score = 84.2 bits (199), Expect = 6e-16
Identities = 45/99 (45%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = -2
Query: 301 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 122
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 121 XXXLTVP---LLGGKVHGSLARAGKVKGQTPKVEKQLKK 14
+LGGKVHGSLARAGKV+GQTPKV KQ KK
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKK 99
>X65921-1|CAA46714.1| 133|Homo sapiens fau 1 protein.
Length = 133
Score = 84.2 bits (199), Expect = 6e-16
Identities = 45/99 (45%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = -2
Query: 301 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 122
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 121 XXXLTVP---LLGGKVHGSLARAGKVKGQTPKVEKQLKK 14
+LGGKVHGSLARAGKV+GQTPKV KQ KK
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKK 99
>CR541974-1|CAG46772.1| 133|Homo sapiens FAU protein.
Length = 133
Score = 84.2 bits (199), Expect = 6e-16
Identities = 45/99 (45%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = -2
Query: 301 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 122
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 121 XXXLTVP---LLGGKVHGSLARAGKVKGQTPKVEKQLKK 14
+LGGKVHGSLARAGKV+GQTPKV KQ KK
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKK 99
>BC033877-1|AAH33877.1| 133|Homo sapiens Finkel-Biskis-Reilly
murine sarcoma virus (FBR-MuSV) ubiquitously expressed
protein.
Length = 133
Score = 84.2 bits (199), Expect = 6e-16
Identities = 45/99 (45%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = -2
Query: 301 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 122
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 121 XXXLTVP---LLGGKVHGSLARAGKVKGQTPKVEKQLKK 14
+LGGKVHGSLARAGKV+GQTPKV KQ KK
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKK 99
>AY398663-1|AAQ87877.1| 133|Homo sapiens Finkel-Biskis-Reilly
murine sarcoma virus (FBR-MuSV) ubiquitously expressed
(fo protein.
Length = 133
Score = 84.2 bits (199), Expect = 6e-16
Identities = 45/99 (45%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = -2
Query: 301 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 122
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 121 XXXLTVP---LLGGKVHGSLARAGKVKGQTPKVEKQLKK 14
+LGGKVHGSLARAGKV+GQTPKV KQ KK
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKK 99
>AK026639-1|BAB15515.1| 133|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22986 fis, clone KAT11742. ).
Length = 133
Score = 84.2 bits (199), Expect = 6e-16
Identities = 45/99 (45%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = -2
Query: 301 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 122
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 121 XXXLTVP---LLGGKVHGSLARAGKVKGQTPKVEKQLKK 14
+LGGKVHGSLARAGKV+GQTPKV KQ KK
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKK 99
>U60800-1|AAC50810.1| 862|Homo sapiens semaphorin protein.
Length = 862
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 706 HQRFW-VSKNRKAKCRKKGNKGDTEMLN 626
H+ +W VS+++KAKC +KG TE LN
Sbjct: 83 HEVYWKVSEDKKAKCAEKGKSKQTECLN 110
>BC054500-1|AAH54500.1| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 706 HQRFW-VSKNRKAKCRKKGNKGDTEMLN 626
H+ +W VS+++KAKC +KG TE LN
Sbjct: 83 HEVYWKVSEDKKAKCAEKGKSKQTECLN 110
>AL929575-4|CAI43250.2| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 706 HQRFW-VSKNRKAKCRKKGNKGDTEMLN 626
H+ +W VS+++KAKC +KG TE LN
Sbjct: 83 HEVYWKVSEDKKAKCAEKGKSKQTECLN 110
>AL590233-3|CAI17379.2| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 706 HQRFW-VSKNRKAKCRKKGNKGDTEMLN 626
H+ +W VS+++KAKC +KG TE LN
Sbjct: 83 HEVYWKVSEDKKAKCAEKGKSKQTECLN 110
>AB210030-1|BAE06112.1| 870|Homo sapiens SEMA4D variant protein
protein.
Length = 870
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 706 HQRFW-VSKNRKAKCRKKGNKGDTEMLN 626
H+ +W VS+++KAKC +KG TE LN
Sbjct: 91 HEVYWKVSEDKKAKCAEKGKSKQTECLN 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,562,194
Number of Sequences: 237096
Number of extensions: 2687269
Number of successful extensions: 9058
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9052
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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