Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F05
         (867 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   4.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   7.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.5  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 447 LFHNPICHHLARE 409
           L HNP+ HHL +E
Sbjct: 347 LHHNPMSHHLKQE 359


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 396 CISILHEPGDDKWGYEKASERW 461
           C+ +  E  +DK GY+K  E++
Sbjct: 409 CLELFEELAEDKDGYKKFYEQF 430


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 243 KSSLLVPQXTLYEGGFFKAHLNFPKEYPLRP 335
           +S L   + T+  G F++    FP  YP  P
Sbjct: 184 RSRLAAFKRTIALGAFYQPLQPFPPPYPFYP 214


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -3

Query: 406 IDMQTSPFLSIFGCHISVTNFIRGGLKGYSLGKFKCALKKP 284
           +  QT+P    +  H S+++ + GGL G  +      L  P
Sbjct: 66  VKQQTAPHGPPYAPHPSLSSGLGGGLSGMPMPALGFGLGHP 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,955
Number of Sequences: 336
Number of extensions: 3746
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)