Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F05
(867 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 211 8e-56
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 151 9e-38
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 94 3e-20
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 92 1e-19
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 87 4e-18
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 86 5e-18
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 85 2e-17
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 82 1e-16
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 74 3e-14
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 68 2e-12
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 66 5e-12
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 64 2e-11
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 42 2e-04
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 33 0.040
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 29 1.1
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 27 4.6
SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8 |Schizo... 26 6.0
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 26 8.0
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 211 bits (516), Expect = 8e-56
Identities = 101/166 (60%), Positives = 123/166 (74%)
Frame = +3
Query: 126 MSEPQSSLLLKKQLAELNKNPXRRLFLLA**MTMIYTNGKSSLLVPQXTLYEGGFFKAHL 305
M S LL+KQL E+ KNP + + I+ + ++ P+ TLYEGGFF A L
Sbjct: 1 MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIF-EWEVMIIGPEDTLYEGGFFHATL 59
Query: 306 NFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVET 485
+FP++YPL PP+MKF TEIWHPN+ NG+VCISILH PGDDK+GYE A ERWLPVH+ ET
Sbjct: 60 SFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPET 119
Query: 486 ILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQE 623
ILISVISML+ PNDESPAN+DAAKE+RE EFKK+V R VR+S E
Sbjct: 120 ILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRSIE 165
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 151 bits (367), Expect = 9e-38
Identities = 69/119 (57%), Positives = 85/119 (71%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 440
P T +EGG + A L FP +YPL PP +KF E +HPN+ K+G VCISILH PGDD Y
Sbjct: 45 PDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMY 104
Query: 441 EKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 617
E +SERW PV +VE IL+SV+SMLA+PNDES AN+DA K WRE E+ + V R RK+
Sbjct: 105 ESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARKT 163
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 206 AGLIDDNDIYKWEVLIIGPPXHTIRGRFL*STFKF 310
AG +++D + W+ LI GP G +T KF
Sbjct: 27 AGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKF 61
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 93.9 bits (223), Expect = 3e-20
Identities = 48/124 (38%), Positives = 73/124 (58%)
Frame = +3
Query: 252 LLVPQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDK 431
++ P T +E G FK L+F ++YP +PP +KFV+ ++HPN+ NG++C+ IL
Sbjct: 40 IIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDIL------- 92
Query: 432 WGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVR 611
RW P + V IL S+ S+L DPN+ SPAN +AA+ RE E+ ++V + V
Sbjct: 93 ------QNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVRKTVE 146
Query: 612 KSQE 623
S E
Sbjct: 147 DSWE 150
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 91.9 bits (218), Expect = 1e-19
Identities = 43/121 (35%), Positives = 70/121 (57%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 440
P T YEG FK ++FP YP PP + F + +WHPN+D +G++C+ IL
Sbjct: 68 PSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDIL---------- 117
Query: 441 EKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQ 620
++W V+ V+TIL+S+ S+L +PN+ SP N AA+ W + E+K+ + + ++
Sbjct: 118 ---KDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKRLLMQRYKEID 174
Query: 621 E 623
E
Sbjct: 175 E 175
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 86.6 bits (205), Expect = 4e-18
Identities = 42/116 (36%), Positives = 68/116 (58%)
Frame = +3
Query: 270 TLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKA 449
T +EGG +K + FP+EYP RPP+ +F ++HPN+ +G VC+SIL+E
Sbjct: 51 TSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNE----------- 99
Query: 450 SERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 617
E W P T++ IL+ + +L DPN SPA +A +++ E++K+V R++
Sbjct: 100 EEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQAREN 155
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 86.2 bits (204), Expect = 5e-18
Identities = 39/103 (37%), Positives = 60/103 (58%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 440
PQ + YEGG F L P EYP+ PP ++F+T+I+HPN+DK G +C+S L
Sbjct: 41 PQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTL---------- 90
Query: 441 EKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRE 569
+ W P + T+L+S+ +++ PN + P + D AK W+E
Sbjct: 91 ---KKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKE 130
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 84.6 bits (200), Expect = 2e-17
Identities = 38/124 (30%), Positives = 67/124 (54%)
Frame = +3
Query: 243 KSSLLVPQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPG 422
+++++ P + Y GG F ++FP +YP +PP++ F T I+HPNI+ NG +C+ IL
Sbjct: 34 QATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILR--- 90
Query: 423 DDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVAR 602
++W P T+ +L+S+ S+L DPN + P + A ++ S ++
Sbjct: 91 ----------DQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSARE 140
Query: 603 CVRK 614
RK
Sbjct: 141 WTRK 144
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 81.8 bits (193), Expect = 1e-16
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNI-DKNGDVCISILHEPGDDKWG 437
P+ T YEGG+F + P +YP RPP+M F T+I+HPN+ + G +C+ IL
Sbjct: 43 PEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDIL--------- 93
Query: 438 YEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEF 584
++W PV+T+++ LIS+ S+L P +P + A+ + + Y +F
Sbjct: 94 ----KDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQF 138
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 73.7 bits (173), Expect = 3e-14
Identities = 44/158 (27%), Positives = 80/158 (50%)
Frame = +3
Query: 129 SEPQSSLLLKKQLAELNKNPXRRLFLLA**MTMIYTNGKSSLLVPQXTLYEGGFFKAHLN 308
+ P SS L K+ ++L ++P + + + + + L P ++Y GG F L
Sbjct: 4 ASPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHW--ACTALGPSDSVYAGGKFHFSLK 61
Query: 309 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 488
FP +YP +PP ++F T I+HPN D G+VC++IL + + + P + ++
Sbjct: 62 FPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQ------------QVFKPSIKLRSV 109
Query: 489 LISVISMLADPNDESPANVDAAKEWRERYSEFKKKVAR 602
L ++ +L +PN + P A+++R F K+AR
Sbjct: 110 LEQILQLLREPNPDDPLVASIAEQYRNDRPSF-DKIAR 146
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 67.7 bits (158), Expect = 2e-12
Identities = 36/117 (30%), Positives = 58/117 (49%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 440
P Y+GG FK + YP PP++K + +I+HPNID G+VC++IL +
Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQD------- 112
Query: 441 EKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVR 611
W PV + +IL+ + + PN E P N +AA + + F +V ++
Sbjct: 113 ------WNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVRTAMK 163
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 66.5 bits (155), Expect = 5e-12
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Frame = +3
Query: 153 LKKQLAELNKNPXRRLFLLA**MTMIYTNGKSSLLVPQXTLYEGGFFKAHLNFPKEYPLR 332
L K+ A L LL + + K+ + P T YEGG + ++ + YP+
Sbjct: 8 LHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPIS 67
Query: 333 PPRMKFVTEIWHPNID-KNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISM 509
PP + F T+I HPNI NG+VC+ IL W P ++++ +++IS+
Sbjct: 68 PPSVYFQTKIVHPNISWTNGEVCMDIL-------------KTHWSPAWSLQSACLAIISL 114
Query: 510 LADPNDESPANVDAAKEWRERYSEFKKKVARC 605
L++ + SP NVDAAK R + RC
Sbjct: 115 LSNYDASSPLNVDAAKLLRTGDKTAYNSLVRC 146
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 64.1 bits (149), Expect = 2e-11
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWG 437
P T Y GG +K H+ P EYP + P + FV I+HPNID+ +G VC+ ++
Sbjct: 39 PSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVI--------- 89
Query: 438 YEKASERWLPVHTVETIL-ISVISMLADPNDESPANVDAA----KEWRERYSEFKKKVAR 602
++ W P+ + I + + +L PN P N +AA +E Y++ + +AR
Sbjct: 90 ----NQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYIAR 145
Query: 603 CVRKSQED 626
K D
Sbjct: 146 YANKEDAD 153
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/111 (24%), Positives = 50/111 (45%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 440
P T YEGG + L FP +YP +PP ++ +T N +C+S
Sbjct: 44 PPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLSF----------S 91
Query: 441 EKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKK 593
+ + W P V TIL+ ++S + ++ + + ++ R Y++ K+
Sbjct: 92 DFHPKSWNPSWMVSTILVGLVSFMTS-DEITTGGIVTSESTRRTYAKDTKR 141
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 33.5 bits (73), Expect = 0.040
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Frame = -3
Query: 580 SEYRSLHSFA----ASTLAGLSSFGSASIEMTLISIVSTVCTGNH 458
S+Y +++S STL SF +AS+ TLI+I ++ CTGN+
Sbjct: 41 SQYTTIYSDGPSEYTSTLPYTHSFSNASVYTTLITITNSQCTGNY 85
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +3
Query: 246 SSLLVPQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNID 380
+++L P +++E + ++ YP PP + FV+ I P +D
Sbjct: 43 ATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVD 87
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.6 bits (56), Expect = 4.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 496 VSFQCSLIQMMRVPLMLMLQKNGENDIRNSKRKLPDVLGKVKKIASRS 639
+S Q + MR+P + NS +K D L K++K+ SRS
Sbjct: 330 LSIQSRAFKKMRLPKISRTTDTPPASTSNSNKKNLDKLKKMRKLCSRS 377
>SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 569
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 444 KASERWLPVHTVETILISVISMLADPNDESPANVDA 551
K ++ W+P+H L + ML PN +P +DA
Sbjct: 196 KLTDEWVPLHGGSGELR--VQMLYKPNQSTPLTIDA 229
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 511 SLIQMMRVPLMLMLQKNGENDI 576
SL+ +M+ PL+ L+KN ND+
Sbjct: 1351 SLLPLMQSPLVFCLRKNDANDL 1372
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,030,468
Number of Sequences: 5004
Number of extensions: 62665
Number of successful extensions: 208
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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