Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F05
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 231 6e-61
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 154 7e-38
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 143 1e-34
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 92 4e-19
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 92 4e-19
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 86 4e-17
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 86 4e-17
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 86 4e-17
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 85 6e-17
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 74 1e-13
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 73 4e-13
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 73 4e-13
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 62 5e-10
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 58 8e-09
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 58 1e-08
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 54 2e-07
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 53 2e-07
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 51 9e-07
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 46 3e-05
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 42 4e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 39 0.004
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 32 0.61
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 31 0.81
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 231 bits (564), Expect = 6e-61
Identities = 109/163 (66%), Positives = 130/163 (79%)
Frame = +3
Query: 138 QSSLLLKKQLAELNKNPXRRLFLLA**MTMIYTNGKSSLLVPQXTLYEGGFFKAHLNFPK 317
QSSLLLKKQLA++ + P IY + ++ P TLYEGGFFKA L+FP+
Sbjct: 3 QSSLLLKKQLADMRRVPVDGFSAGLVDDNDIY-KWEVLVIGPPDTLYEGGFFKAILDFPR 61
Query: 318 EYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILIS 497
+YP +PP+MKF++EIWHPNIDK G+VCISILH+PGDDKWGYE+ ERWLPVHTVETIL+S
Sbjct: 62 DYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLS 121
Query: 498 VISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQED 626
VISML DPN ESPANVDAAK RE Y+EFKKKVA+CVR+SQE+
Sbjct: 122 VISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRSQEE 164
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 154 bits (374), Expect = 7e-38
Identities = 68/119 (57%), Positives = 88/119 (73%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 440
P+ T + G F A + FP++YPL PP+M+F I+HPNI +G VCISILH PGDD GY
Sbjct: 44 PEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGY 103
Query: 441 EKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 617
E ++ERW PV ++E IL+SV+SMLA+PNDESPANV AAK WRE ++F+K VRK+
Sbjct: 104 ELSNERWSPVQSIEKILLSVVSMLAEPNDESPANVSAAKMWREDRAQFEKIADSLVRKT 162
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 143 bits (347), Expect = 1e-34
Identities = 66/125 (52%), Positives = 88/125 (70%), Gaps = 4/125 (3%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 440
P TLY+GG+FKA + FP YP PP MKF T++WHPN+ +NGD+CISILH P DD
Sbjct: 49 PPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSG 108
Query: 441 EKASERWLPVHTVETILISVISMLADPNDESPANVDAA---KEWRE-RYSEFKKKVARCV 608
E A ERW P +V TIL+SVIS+L +PN SPANVDA+ ++W+E + E+ K V + V
Sbjct: 109 ELACERWNPTQSVRTILLSVISLLNEPNTSSPANVDASVMYRKWKEDQDPEYAKIVTKQV 168
Query: 609 RKSQE 623
+S++
Sbjct: 169 EESKK 173
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 92.3 bits (219), Expect = 4e-19
Identities = 46/119 (38%), Positives = 71/119 (59%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 440
PQ T +E G FK L F +EYP +PP +KF+++++HPN+ +G +C+ IL
Sbjct: 43 PQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL---------- 92
Query: 441 EKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 617
RW P + V IL S+ S+L +PN SPAN AA+ ++E E++K+V + V +S
Sbjct: 93 ---QNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQS 148
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 92.3 bits (219), Expect = 4e-19
Identities = 46/119 (38%), Positives = 71/119 (59%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 440
PQ T +E G FK L F +EYP +PP +KF+++++HPN+ +G +C+ IL
Sbjct: 43 PQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL---------- 92
Query: 441 EKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 617
RW P + V IL S+ S+L +PN SPAN AA+ ++E E++K+V + V +S
Sbjct: 93 ---QNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQS 148
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 85.8 bits (203), Expect = 4e-17
Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Frame = +3
Query: 243 KSSLLVPQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPG 422
+++++ P + Y+GG F ++FP +YP +PP++ F T I+HPNI+ NG +C+ IL
Sbjct: 34 QATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--- 90
Query: 423 DDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEW---RERYSEFKKK 593
+W P T+ +L+S+ S+L DPN + P + A+ + RERY++ ++
Sbjct: 91 ----------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLARE 140
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 85.8 bits (203), Expect = 4e-17
Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Frame = +3
Query: 243 KSSLLVPQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPG 422
+++++ P + Y+GG F ++FP +YP +PP++ F T I+HPNI+ NG +C+ IL
Sbjct: 34 QATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--- 90
Query: 423 DDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEW---RERYSEFKKK 593
+W P T+ +L+S+ S+L DPN + P + A+ + RERY++ ++
Sbjct: 91 ----------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLARE 140
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 85.8 bits (203), Expect = 4e-17
Identities = 38/107 (35%), Positives = 63/107 (58%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 440
P + + GG FK L P+EYP+ P+++F+T+I+HPNIDK G +C+ IL
Sbjct: 43 PDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDIL---------- 92
Query: 441 EKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSE 581
++W P + T+L+S+ ++L+ PN E P D A++W+ +E
Sbjct: 93 ---KDKWSPALQIRTVLLSIQALLSAPNPEDPLATDVAEQWKTNEAE 136
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 85.0 bits (201), Expect = 6e-17
Identities = 38/124 (30%), Positives = 66/124 (53%)
Frame = +3
Query: 252 LLVPQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDK 431
LL+P Y G FK + FP +YP +PP++ F T+I+HPN+D+ G C+ I+
Sbjct: 38 LLIPDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPIV------- 90
Query: 432 WGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVR 611
+E W P E ++++++S++ +P P D A+E+++ + +F K R
Sbjct: 91 -----TAENWKPATKTEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMKTAEEHTR 145
Query: 612 KSQE 623
K E
Sbjct: 146 KHAE 149
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 79.4 bits (187), Expect = 3e-15
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = +3
Query: 255 LVPQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKW 434
+ PQ +Y GG F+ + P EY PP +K +T++WHPNI+++G +C+SIL + D++
Sbjct: 65 VTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQY 124
Query: 435 GYEKASERWLPVHTVETILISVISMLADPNDESPA-NVDAAKEWRERYSEFKKKVARCVR 611
G W P + ++ ++S+ D D + A N+ AA+ W + F +V +
Sbjct: 125 G-------WRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYIS 177
Query: 612 K 614
+
Sbjct: 178 R 178
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 74.1 bits (174), Expect = 1e-13
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Frame = +3
Query: 234 TNGKSSLLVPQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNI-DKNGDVCISIL 410
T K + P T Y GG F + P +YP PP +KF T+IWHPN+ + G +C+ IL
Sbjct: 37 TEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDIL 96
Query: 411 HEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFK 587
++W T+ T+L+S+ +++ P + P + AK++ E+ + FK
Sbjct: 97 -------------KDQWAASLTLRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFK 142
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 72.5 bits (170), Expect = 4e-13
Identities = 34/111 (30%), Positives = 63/111 (56%)
Frame = +3
Query: 270 TLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKA 449
T++EGG ++ + F ++P PP+ KF ++HPN+ +G VC+S+L E D
Sbjct: 51 TIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-------- 102
Query: 450 SERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVAR 602
W P +++ +LI + +L PN E PA +A + + + +E++K+V +
Sbjct: 103 ---WKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 72.5 bits (170), Expect = 4e-13
Identities = 34/111 (30%), Positives = 63/111 (56%)
Frame = +3
Query: 270 TLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKA 449
T++EGG ++ + F ++P PP+ KF ++HPN+ +G VC+S+L E D
Sbjct: 51 TIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-------- 102
Query: 450 SERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVAR 602
W P +++ +LI + +L PN E PA +A + + + +E++K+V +
Sbjct: 103 ---WKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 66.1 bits (154), Expect = 3e-11
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Frame = +3
Query: 255 LVPQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDK 431
++ LY+ F L+ EYP +PP +KF ++HPN+D ++C +L +
Sbjct: 50 IIGDGVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQ----- 104
Query: 432 WGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVR 611
E W P T+E +L+++I +L +P+ P N+DAA ++ EF KK +
Sbjct: 105 -------ENWKPETTMEDVLLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVKKSTELAK 157
Query: 612 K 614
K
Sbjct: 158 K 158
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 62.1 bits (144), Expect = 5e-10
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRM---------------KFVTEIWHPNI-DKNGD 392
P+ T Y GG F+ ++ P+ YP PP++ KFVT IWHPNI + G
Sbjct: 60 PEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGT 119
Query: 393 VCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRER 572
+C+ IL ++W T+ T+L+S+ +ML P P + AK++
Sbjct: 120 ICLDIL-------------KDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINN 166
Query: 573 YSEF 584
Y F
Sbjct: 167 YPMF 170
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 58.0 bits (134), Expect = 8e-09
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Frame = +3
Query: 264 QXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGY 440
+ T YEGG F+ + + YP + P +KF+T+IWHP++ +G +C LH+ + W
Sbjct: 389 EETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTIC---LHDVDNGVW-- 443
Query: 441 EKASERWLPVH-TVETILISVISMLADPNDESPANVDAAKEWRERYSEFKK 590
PV T+ +LI + S +++ N++ P +V+ ++ F+K
Sbjct: 444 --------PVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEK 486
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 57.6 bits (133), Expect = 1e-08
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Frame = +3
Query: 237 NGKSSLLV----PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCI 401
NG S +V P+ T YE G ++ ++ P +YP + P + F+ +I+HPNID+ +G VC+
Sbjct: 30 NGCSEFIVRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCL 89
Query: 402 SILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSE 581
++++ + + +LP +L PN P N +AA+ + + E
Sbjct: 90 DVINQAWTALYDLTNIFDTFLP------------QLLTYPNAADPLNGEAARLYIHKPEE 137
Query: 582 FKK 590
+++
Sbjct: 138 YRR 140
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/111 (26%), Positives = 58/111 (52%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 440
P+ + +EGG ++ +NF K +P+ PP +F T + HPN+D G + + +L +
Sbjct: 78 PRGSPWEGGEYEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQ-------- 128
Query: 441 EKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKK 593
E W +++ +L + ++LA P+ AN++A E+ + ++ K
Sbjct: 129 ----EHWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAK 175
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Frame = +3
Query: 153 LKKQLAELNKNPXRRLFLLA**MTMIYTNGKSSLLVPQXTLYEGGFFKAHLNFPKEYPLR 332
L K+LA+L L + + K ++ + TLY G F F +YP
Sbjct: 9 LMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFN 68
Query: 333 PPRMKFVTEI--WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVIS 506
P + FV E HP+I NG +C+SIL S+ W P +V+++ +S++S
Sbjct: 69 SPEVMFVGETIPAHPHIYSNGHICLSIL-------------SDDWTPALSVQSVCLSILS 115
Query: 507 MLADPNDESPANVDA 551
ML+ ++ DA
Sbjct: 116 MLSSSKEKKHPIDDA 130
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 51.2 bits (117), Expect = 9e-07
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Frame = +3
Query: 270 TLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKA 449
T +EGG + + FP +YP++PP + +T + + N VC+SI GY
Sbjct: 51 TDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSIS--------GYH-- 98
Query: 450 SERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYS----EFKKKVARCVRKS 617
E WLP ++ T L+++I L + ++D + R+R + E+K K CV K+
Sbjct: 99 PETWLPSWSIRTALLALIGFLPSTPGGALGSLDYPPKERQRLAKLSCEWKCKECGCVMKT 158
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTE-----IWHPNIDKNGDVCISILHEPGD 425
P T Y G F+ + FP YP PP+ F+T ++PN+ +G +C+SIL
Sbjct: 452 PDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSIL----- 506
Query: 426 DKWGYEKASERWLPVHTVETILISV 500
W + E+W P ++ +L+S+
Sbjct: 507 GTW-EGRPEEKWNPYCSLMQVLVSI 530
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/83 (30%), Positives = 40/83 (48%)
Frame = +3
Query: 270 TLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKA 449
T YEGG + L FPK++P +PP + +T + N +C+SI +
Sbjct: 50 TPYEGGIYMGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSI----------SDYH 97
Query: 450 SERWLPVHTVETILISVISMLAD 518
+ W P TV TI+ ++S + D
Sbjct: 98 PDTWNPAWTVSTIITGLMSFMND 120
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWH 368
P T YE G F+ L FP YP P++KF T IW+
Sbjct: 38 PADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWN 73
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 36.3 bits (80), Expect = 0.028
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 261 PQXTLYEGGFFKAHLNF-PKEYPLRPPRMKFVTEIWHPNIDKNGD 392
P ++YEGG F A +N P + PR+ F T I+HPN+ K G+
Sbjct: 71 PVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYGN 115
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +3
Query: 225 MIYTNGKSSLLVPQXTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDV 395
M T +S++ P T YE + + YP PP ++F T++ ++++ V
Sbjct: 36 MTLTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGV 92
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 31.9 bits (69), Expect = 0.61
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Frame = +3
Query: 273 LYEGGFFKAHLNFPKEYPLRP--PRMKF-VTEIWHPNI-DKNGDVCISILHEPGDDKWGY 440
++ GG F+ +++ P E+P PR+ F + ++HP I K+ ++C++ G W
Sbjct: 61 IFGGGIFRFNIHIPLEFPDASDLPRVIFEQSNLFHPLICTKSKELCLNRSFPEG---WKK 117
Query: 441 EKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQ 620
EK S R + V ++ S D + + N +A+ ++E +F++ CV S+
Sbjct: 118 EKHSLRRVLV-VLQRSFYSY-----DVDTDKCINPEASVLYKEHRDKFREIAKECVEASR 171
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 31.5 bits (68), Expect = 0.81
Identities = 25/90 (27%), Positives = 40/90 (44%)
Frame = +3
Query: 270 TLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKA 449
T + GG++ + F + +P PP + +T + N +C+SI +
Sbjct: 61 TPFYGGYYWGKVIFKENFPWSPPAITMITP--NGRFQTNTRLCLSI----------SDYH 108
Query: 450 SERWLPVHTVETILISVISMLADPNDESPA 539
E W P TV ILI + S + N+ SPA
Sbjct: 109 PESWNPGWTVSAILIGLHSFM---NENSPA 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,708,279
Number of Sequences: 27780
Number of extensions: 347572
Number of successful extensions: 917
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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