Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F04
         (872 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    28   0.083
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   3.1  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   5.5  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   5.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.5  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   5.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.5  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   5.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   7.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.6  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   9.6  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   9.6  

>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 28.3 bits (60), Expect = 0.083
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +1

Query: 607 LSAPPPKVPLDVSVRAHWLSVDGVQPTVPENPP---PLSKEAQKLESVDPISKLS 762
           LS+ P   P+  + +   +  +  +PTVP+ PP   P +  +  LES DP S+ S
Sbjct: 184 LSSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPPAEFPTTSSSSALESPDPASRSS 238


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 390 SLESDCSRCHEVHASLKETKTFHYRY 467
           ++E+DCS+C E     KE   F  RY
Sbjct: 72  AIETDCSKCSE---KQKEGSDFIMRY 94


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 390 SLESDCSRCHEVHASLKETKTFHY 461
           +L+SDC++C E    + + K  H+
Sbjct: 65  ALKSDCAKCSEKQKEMTK-KVIHF 87


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +3

Query: 390 SLESDCSRCHEVHASLKETKTFHYRYRSCP 479
           +L+++C++C+E H      K  H+  ++ P
Sbjct: 67  ALQNECAKCNEKHKE-GVRKVLHHLIKNKP 95


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
 Frame = +1

Query: 589 IDLSEILSAPPPKVPLDVSVRAHWLSVDGVQPTVPENPPPLSKEAQKLESVD---PISKL 759
           ID+ +      PK PL   + A+  S    +PT+   P P         S D   P+   
Sbjct: 371 IDMDDFHGLCGPKNPLINILYANMNSYSVPEPTISTTPRPEWARPPSTPSADGSKPVQTT 430

Query: 760 SKP 768
            KP
Sbjct: 431 PKP 433


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 666 CGWGSTNST 692
           C WGS NST
Sbjct: 212 CNWGSANST 220


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 666 CGWGSTNST 692
           C WGS NST
Sbjct: 372 CNWGSANST 380


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 666 CGWGSTNST 692
           C WGS NST
Sbjct: 372 CNWGSANST 380


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -2

Query: 787 LQNLYCLVYSVYLLDQQIQVSELLLKAVVDFQVLLVEPHPHLANVHE 647
           L +   LV +  +L Q+    +  LK V DFQ  L +      + HE
Sbjct: 250 LMDFSVLVEACGVLQQEPHRRDAFLKEVADFQETLKKISQFQLDAHE 296


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -2

Query: 787 LQNLYCLVYSVYLLDQQIQVSELLLKAVVDFQVLLVEPHPHLANVHE 647
           L +   LV +  +L Q+    +  LK V DFQ  L +      + HE
Sbjct: 250 LMDFSVLVEACGVLQQEPHRRDAFLKEVADFQETLKKISQFQLDAHE 296


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = -2

Query: 739 QIQVSELLLKAVVDFQVLLVEPHPHLANVHEQIHPMEPLGVVLIESPRDLSLFL 578
           Q+   +LLL  ++   V+ V+ H     +  ++    P+G+V +   ++ SLF+
Sbjct: 97  QVFAPQLLLWVLLGVMVVTVDLHVFFFTLFNKLLGQYPVGIVGV---KNASLFI 147


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 697 NPPPLSKEAQKLESVDPISKLSKPSNKDSAGK 792
           N PP      +L +V  I +      K +AGK
Sbjct: 58  NAPPYMSSVLQLPTVTEIQETQPQRTKPTAGK 89


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 5/13 (38%), Positives = 12/13 (92%)
 Frame = +3

Query: 390 SLESDCSRCHEVH 428
           +L+++C++C+E H
Sbjct: 66  ALQNECAKCNEKH 78


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 697 NPPPLSKEAQKLESVDPISKLSKPSNKDSAGK 792
           N PP      +L +V  I +      K +AGK
Sbjct: 49  NAPPYMSSVLQLPTVTEIQETQPQRTKPTAGK 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,229
Number of Sequences: 336
Number of extensions: 4125
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)