Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F04
(872 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0080 - 17957276-17957676,17957810-17957921,17958001-179581... 129 3e-30
01_06_1682 - 39130696-39131705,39132355-39132583 31 1.2
12_01_0753 + 6810239-6810661,6812495-6812584,6812724-6812894,681... 31 1.6
12_02_1174 - 26696869-26698191 30 2.1
08_02_1464 - 27317282-27318037 30 2.1
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 29 3.7
01_06_0113 - 26569803-26569874,26570032-26570111,26570712-26571258 29 3.7
09_01_0180 + 2632507-2634870 29 4.9
06_03_0152 + 17287133-17287490,17288541-17288734,17289349-172895... 29 4.9
06_02_0107 - 11904636-11904699,11904940-11905013,11905671-119058... 29 4.9
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 29 4.9
08_01_0329 - 2962018-2962695 29 6.4
01_01_0051 + 389051-389623 29 6.4
11_06_0500 + 24362627-24362828,24363046-24363704,24364958-243653... 28 8.5
11_03_0184 + 11317787-11318198,11318337-11318671,11318756-113190... 28 8.5
10_08_0971 - 21949721-21949936,21950051-21950484,21950599-219507... 28 8.5
10_06_0078 + 10416950-10417174,10417595-10417679,10417782-104179... 28 8.5
>01_05_0080 -
17957276-17957676,17957810-17957921,17958001-17958126,
17958199-17958331,17960069-17960193,17960314-17960409,
17960430-17960621,17960694-17960800,17961318-17961426,
17961538-17961624,17963017-17963103,17964254-17964379
Length = 566
Score = 129 bits (311), Expect = 3e-30
Identities = 64/134 (47%), Positives = 92/134 (68%)
Frame = +1
Query: 304 DSMKVIAESVGIATLGDDAAKELADDVTYRLKVIVQDAMKFMHHSKRQKLSITDIDHALK 483
++++VI +SVGIA L D + LA DV YRL+ I+Q+A+K M H+KR L+ D+D AL
Sbjct: 7 ETIEVIGQSVGIANLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADDVDSALS 66
Query: 484 IKNNECQYGFIQPDSLPFRFASGGGRELHFIEEKEIDLSEILSAPPPKVPLDVSVRAHWL 663
++N E YGF D L F+ A G ++L +I+++ EI+ AP PK PLD +V AHWL
Sbjct: 67 LRNVEPVYGFASGDPLRFKRAV-GHKDLFYIDDR-----EIIEAPLPKAPLDTAVVAHWL 120
Query: 664 SVDGVQPTVPENPP 705
+++GVQP +PENPP
Sbjct: 121 AIEGVQPAIPENPP 134
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 619 PPKVPLDVSVRAHWLSVDGVQPTVPENPPPLSKEAQKLESVDPISKLSKP 768
PPKVPL++S AH S QP V +PPP + A + ++ P
Sbjct: 359 PPKVPLEMSPPAHATS---PQPLVHYSPPPPLQHAGISSTTPSVNSYQSP 405
>12_01_0753 +
6810239-6810661,6812495-6812584,6812724-6812894,
6813015-6813109,6813538-6813658,6813884-6814015
Length = 343
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +1
Query: 604 ILSAPPPKVPLD--VSVRAHWLSVDGVQPTVPENPPP 708
+LSAPPP P+D S AH P PE PP
Sbjct: 6 LLSAPPPPPPMDEDASAGAHHAFPGPAPPPSPEGAPP 42
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Frame = +1
Query: 613 APPPKVPLDVSVRAHW--LSVDGVQPTVPENPPPLSKEAQKLESV---DPISKLSKPSNK 777
+PPP PL +W +V +PT P+ PPP + S P ++ K
Sbjct: 266 SPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSPPPPPQQPSQRYWTPPPAITPEPAK 325
Query: 778 DSAGKPICGKAARLKAS 828
+AGKP K S
Sbjct: 326 PAAGKPTSSSPPSTKDS 342
>08_02_1464 - 27317282-27318037
Length = 251
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 694 ENPPPLSKEAQKLESVDPISKLSKPSNKDSAGK 792
E PPP + A S +P +LS PS+K AG+
Sbjct: 12 EWPPPALQAASTTSSSEPCRRLSPPSSKRPAGR 44
>01_06_0893 - 32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 682 PTVPENPPPLSKEAQKLESVDPISK-LSKPSNKDSAGKPICGKAARLKASES 834
PT P+ P PL K+ S+DP+SK +S SN ++ + KAA L S++
Sbjct: 873 PT-PKQPAPL---VDKVTSLDPVSKQMSSMSNSEAREAILPKKAAVLSVSQT 920
>01_06_0113 - 26569803-26569874,26570032-26570111,26570712-26571258
Length = 232
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 595 LSEILSAPPPKVPLDVSVRAHWLSVDGVQPTVPENPPPLSKEAQKLESVDP 747
L+ +L AP P D ++ + V+G+ P +P PP+ A + V P
Sbjct: 28 LAVVLMAPIINGPPDPNISIRLVGVEGLDPRLPAPVPPVFDLAVDVAGVSP 78
>09_01_0180 + 2632507-2634870
Length = 787
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 691 PENPPPLSKEAQKLESVDPISKL--SKPSNK---DSAGKPICGKAARLKASESVHVNSLL 855
P+ P P AQ+ +SV P+SK S PS K S P A+ ++S+ V L+
Sbjct: 225 PKKPSPPPPPAQQQQSVPPMSKFNPSPPSPKLVPFSNSPPSSANASAAESSQKVTPTPLV 284
Query: 856 P 858
P
Sbjct: 285 P 285
>06_03_0152 +
17287133-17287490,17288541-17288734,17289349-17289557,
17289640-17289742,17290128-17290291,17290554-17290692,
17290908-17291078,17291162-17291298,17291445-17291759,
17291906-17291965,17292372-17292511,17292691-17292788,
17292875-17293387
Length = 866
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +1
Query: 643 SVRAHWLSVDGVQPTVPENPPPLSKEAQKLESVDPIS---KLSKPSNK 777
S+ ++ LS+ + PT +NP P+S A LE+ +S KLSKP+NK
Sbjct: 731 SMASNILSMANLNPT--QNPVPISN-ASPLEAYRDLSMERKLSKPANK 775
>06_02_0107 -
11904636-11904699,11904940-11905013,11905671-11905802,
11910309-11911018,11911110-11911852,11911936-11913753,
11914037-11914338
Length = 1280
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +1
Query: 340 ATLGDDAAKELADDVTYRLKVIVQDAMKFM-----HHSKRQKLSITDIDHALK-IKNNEC 501
ATLGDD KE+ + + + ++ QD ++ + H + QKL + A++ KN
Sbjct: 390 ATLGDDQTKEIMEQIKGIIHLVKQDILEEIQAIKSHGPREQKLGHDQVVSAIQDAKNKIT 449
Query: 502 QYG 510
Q G
Sbjct: 450 QIG 452
>01_01_1018 -
8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 706 PLSKEAQKLE--SVDPISKLSKPSNKDSAGKPICGKAARLKASESVHVNSL 852
P+SK + E S +SK + P++ S+GK K ++ VHVN +
Sbjct: 336 PVSKTVDRAEQTSNSTVSKPTSPASDGSSGKHYPAKRLKVDVPHLVHVNEM 386
>08_01_0329 - 2962018-2962695
Length = 225
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 550 GGGRELHFIEEKEIDLSEILSAPPPKVPLDVSVRAHWLSVDGVQPTVPENPPPLSKEAQK 729
GGGR+ +E ++ +L A V L + +H +S T P PP L A
Sbjct: 5 GGGRKAAVTGGEEAEVEALLRAAQDAVMLKLQANSHLVS-SSSSATAPNLPPSLDHPA-A 62
Query: 730 LESVDPI 750
+ DP+
Sbjct: 63 AAAADPL 69
>01_01_0051 + 389051-389623
Length = 190
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 691 PENPPPLSKEAQKLESVDPISKLSKPSNKDSAGKPICGKAAR 816
P PP KEA++ S P S S S+ S+G ++AR
Sbjct: 146 PSPPPQYKKEARRSPSPSPPSSSSTSSSSSSSGSSWWTRSAR 187
>11_06_0500 +
24362627-24362828,24363046-24363704,24364958-24365300,
24366227-24366645
Length = 540
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 85 YLSTLINFTLSQQEKIRNKKLKINPKNTVIQGV 183
YL + NF +Q KIRN+ L+I + + QGV
Sbjct: 378 YLKSQFNFCRTQAWKIRNEILRIGGSDEMQQGV 410
>11_03_0184 +
11317787-11318198,11318337-11318671,11318756-11319048,
11319125-11319483,11319549-11319748,11319823-11320012,
11320084-11320188,11320262-11320338,11320428-11320649
Length = 730
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 703 PPLSKEAQKLESVDPISKLSKPSNKDSAGKPICGKAARLKASES 834
P + K ++K +DP K S P+N D++ G A S++
Sbjct: 340 PKIRKSSRKPSDIDPSGKDSNPTNVDTSSSKETGPTAEDHPSDN 383
>10_08_0971 -
21949721-21949936,21950051-21950484,21950599-21950791,
21950909-21951007,21951114-21951191,21951275-21951669,
21954317-21954482,21954840-21954927,21955015-21955127,
21955242-21955426,21955840-21955987,21956071-21956349,
21956425-21956529,21956892-21957137,21957367-21957408,
21957539-21957613
Length = 953
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 579 FNEMEFSTSSRCEPKWQRIRLNKSILTLIVFYLQGMIYICNG 454
F+ E+ST +CE LN I +L F +GM++I G
Sbjct: 297 FHGWEYSTDGKCEKMPATKLLNVRIRSLPCFEQEGMVWIWPG 338
>10_06_0078 +
10416950-10417174,10417595-10417679,10417782-10417900,
10418200-10418287,10419400-10419452,10419876-10420015,
10420094-10420166,10420243-10420311,10420632-10420844,
10422304-10422498,10422581-10422658,10423456-10423590
Length = 490
Score = 28.3 bits (60), Expect = 8.5
Identities = 26/106 (24%), Positives = 45/106 (42%)
Frame = +1
Query: 181 VYRNRNQFGDKSLFNAVVNVSKDLISIMGDSELAYGSSLTLDSMKVIAESVGIATLGDDA 360
V+ N+ Q ++ L AV+ D +L GS L K AE +G G
Sbjct: 69 VFYNKAQVNNRDLSIAVLRSFISRRREEHDIQLRRGSHAELPP-KHHAEELGHIR-GSSE 126
Query: 361 AKELADDVTYRLKVIVQDAMKFMHHSKRQKLSITDIDHALKIKNNE 498
K L+++++YR +++ + R L + I + + NNE
Sbjct: 127 DKALSEEISYRAPKVLEALAASGLRAIRYALEVDGIGEVIAVDNNE 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,163,747
Number of Sequences: 37544
Number of extensions: 428139
Number of successful extensions: 1371
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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