Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F04
         (872 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           27   0.75 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   4.0  
AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin preprop...    24   5.3  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 27.1 bits (57), Expect = 0.75
 Identities = 21/82 (25%), Positives = 33/82 (40%)
 Frame = +1

Query: 544 ASGGGRELHFIEEKEIDLSEILSAPPPKVPLDVSVRAHWLSVDGVQPTVPENPPPLSKEA 723
           AS GG++ H      + LS ++  PP  V  +  +RA   S    Q    + P P S+  
Sbjct: 245 ASSGGQQQHARLSSSLPLSSVIGGPPGMV--NNGLRAPPSSQQQPQQQPSQQPQPSSQSN 302

Query: 724 QKLESVDPISKLSKPSNKDSAG 789
            +L +      L   S    +G
Sbjct: 303 AQLTNGGSNGLLGSSSQAGGSG 324


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 553 GGRELHFIEEKEIDLSEILSAPPPKVP 633
           GGRE     E  ID  E+ +AP PK P
Sbjct: 167 GGREQMMKNETSID--EVPNAPAPKAP 191


>AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin
           preproprotein protein.
          Length = 193

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +3

Query: 396 ESDCSRCHEVHASLKETKTFHYRYRSCPEDKKQ*VSIWIYSA 521
           E+  +   + H  LK+T  +  R +  P D+K    I  Y A
Sbjct: 51  EATINHLQQQHQRLKDTNVYRARSKMRPHDRKYPGVIGAYEA 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 840,722
Number of Sequences: 2352
Number of extensions: 15665
Number of successful extensions: 56
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)