Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_F03
(980 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 117 5e-25
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 9e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 61 5e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 49 2e-04
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 47 8e-04
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.018
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.056
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.097
UniRef50_UPI000155C1EA Cluster: PREDICTED: similar to glutamate-... 35 3.7
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 34 6.4
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 117 bits (281), Expect = 5e-25
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +1
Query: 556 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLRE 711
TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLRE
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLRE 75
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.3 bits (172), Expect = 9e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +1
Query: 556 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 669
TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = +1
Query: 556 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 681
TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 320 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 418
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 60.9 bits (141), Expect = 5e-08
Identities = 37/57 (64%), Positives = 38/57 (66%)
Frame = -2
Query: 553 RGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVITLILWITVLPPLSELIPLAAAERP 383
RGAEPMEKR + L V LL CS L LILWITVLPPLSEL PLAA ERP
Sbjct: 4 RGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 296 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 454
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -1
Query: 701 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 582
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 46.8 bits (106), Expect = 8e-04
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +3
Query: 648 VRSPVPTLPLTGYLSAFLPSGT 713
+RSPVPTLPLTGYLSAFLPSG+
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGS 22
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 42.3 bits (95), Expect = 0.018
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 520 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 669
++ +F T+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.056
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 294 SALMNRPTRGERRFAYW 344
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.097
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 366 ERGSGRAPNTQTASPRALADSLMQ 295
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI000155C1EA Cluster: PREDICTED: similar to
glutamate-rich 1; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to glutamate-rich 1 - Ornithorhynchus
anatinus
Length = 450
Score = 34.7 bits (76), Expect = 3.7
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +2
Query: 554 ERASQKSTLKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGNWLSXQXV 733
ER ++S L +P R ++ PW +P + + PAA +I SP G++ S +
Sbjct: 10 ERVMERSRLVDGSTQPARLLRDMSPIPWNVPISRNRKAPAAVKIQKMFSPLGSFRSELCL 69
Query: 734 SSLAR 748
+ + +
Sbjct: 70 NKITK 74
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 33.9 bits (74), Expect = 6.4
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 611 IKIPGVSPWKLPRALSCSDPAAYRIPV 691
+KI VS LP ALSCS+PA RIPV
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,386,359
Number of Sequences: 1657284
Number of extensions: 12317552
Number of successful extensions: 38149
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 36381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38128
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 91856548575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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