Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_F02
         (958 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY029256-1|AAK32965.1|   77|Drosophila melanogaster cytochrome c...    77   3e-14
AE014134-909|AAF52241.3|   77|Drosophila melanogaster CG14028-PA...    77   3e-14
AY070808-1|AAL48430.1|   87|Drosophila melanogaster AT20031p pro...    47   4e-05
AE014134-976|AAN10559.1|   87|Drosophila melanogaster CG31644-PA...    47   4e-05

>AY029256-1|AAK32965.1|   77|Drosophila melanogaster cytochrome c
           oxidase subunit VIc protein.
          Length = 77

 Score = 77.4 bits (182), Expect = 3e-14
 Identities = 38/78 (48%), Positives = 49/78 (62%)
 Frame = +2

Query: 119 MAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTY 298
           MA   A S+A  P +RGL NA IKRN+ V+L L+ V    +K L+ + +K  YA+FY  Y
Sbjct: 1   MANTPATSSAG-PVLRGLHNATIKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKY 59

Query: 299 DAEKEFEEMRKKGLFQSC 352
           DA K FE M+  G FQSC
Sbjct: 60  DANKSFERMKAAGRFQSC 77


>AE014134-909|AAF52241.3|   77|Drosophila melanogaster CG14028-PA
           protein.
          Length = 77

 Score = 77.4 bits (182), Expect = 3e-14
 Identities = 38/78 (48%), Positives = 49/78 (62%)
 Frame = +2

Query: 119 MAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTY 298
           MA   A S+A  P +RGL NA IKRN+ V+L L+ V    +K L+ + +K  YA+FY  Y
Sbjct: 1   MANTPATSSAG-PVLRGLHNATIKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKY 59

Query: 299 DAEKEFEEMRKKGLFQSC 352
           DA K FE M+  G FQSC
Sbjct: 60  DANKSFERMKAAGRFQSC 77


>AY070808-1|AAL48430.1|   87|Drosophila melanogaster AT20031p
           protein.
          Length = 87

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 23/54 (42%), Positives = 28/54 (51%)
 Frame = +2

Query: 191 RNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQSC 352
           RN+ +A  L+ +A   F  L  N RKRKY  FY TYD    F+ M   G   SC
Sbjct: 20  RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSC 73


>AE014134-976|AAN10559.1|   87|Drosophila melanogaster CG31644-PA
           protein.
          Length = 87

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 23/54 (42%), Positives = 28/54 (51%)
 Frame = +2

Query: 191 RNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQSC 352
           RN+ +A  L+ +A   F  L  N RKRKY  FY TYD    F+ M   G   SC
Sbjct: 20  RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSC 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,170,122
Number of Sequences: 53049
Number of extensions: 339331
Number of successful extensions: 727
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4771654299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)