Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_E21
         (864 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0879 - 28447816-28447989,28448933-28449358                       32   0.68 
12_01_0059 + 494876-494924,496060-496211,496344-496531,496971-49...    30   2.1  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.3  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.4  

>03_05_0879 - 28447816-28447989,28448933-28449358
          Length = 199

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 17/63 (26%), Positives = 26/63 (41%)
 Frame = -1

Query: 762 G*TGVRAHXPSLERTTYTXXEIPTAXAMRKRHASRREKGGQVSGKRQGRXQESARGSXPG 583
           G   VR   P       T  ++P   +    H +R  +GG VS + Q R +E  +    G
Sbjct: 11  GGAAVRRRAPPASAAAATRLDLPLVGSRAALHVARARRGG-VSSRTQRRLEERGKNKRRG 69

Query: 582 GNA 574
           G +
Sbjct: 70  GGS 72


>12_01_0059 +
           494876-494924,496060-496211,496344-496531,496971-497027,
           497123-497282,497389-497457,497712-497837,497972-498091
          Length = 306

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 503 PDEHHKNRR---SSQRWRNPTGL*RYQAFPPGKLPRALSXFRPCRLPD 637
           P +H  N     SS+ + +P G+  +  FP   LP A S ++P  LP+
Sbjct: 10  PGKHRLNDTLLTSSRNYVSPQGILEFYNFPIPSLPSASSNYQPSSLPE 57


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 306 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 461
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 255 NESAN---ARGEAVCVLGALPLPRSLTRCAR 338
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,512,665
Number of Sequences: 37544
Number of extensions: 436101
Number of successful extensions: 1178
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)