Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_E19
         (924 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,713...    33   0.24 
05_05_0024 + 21613199-21613208,21613466-21613560,21613656-216137...    33   0.24 
05_05_0023 + 21605803-21605917,21606054-21606148,21606261-216063...    30   3.0  

>10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,
            7131375-7131459,7131609-7131771,7132861-7132937,
            7133016-7133160,7133236-7133537,7133615-7133720,
            7134781-7134935,7135556-7135712,7135799-7135891,
            7136232-7136359,7136439-7136696,7136855-7137145,
            7137235-7137318,7138335-7138468,7138557-7138784,
            7139778-7139958,7140021-7140108,7140268-7140434,
            7140750-7141012,7141117-7141120
          Length = 1216

 Score = 33.5 bits (73), Expect = 0.24
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -1

Query: 162  LKFKNEIITNRSVQFVFCFRRQTQSIWLRXPLFKDIPLYQSXKDALV 22
            LKF +E   NR  QF+ C R+Q+   W R P +  + L+ +   A++
Sbjct: 926  LKFSSEFSQNRLTQFMVCLRKQSLVYW-RSPEYNVVRLFFTSVAAII 971


>05_05_0024 +
           21613199-21613208,21613466-21613560,21613656-21613713,
           21613843-21614037,21614237-21614316,21614402-21614512
          Length = 182

 Score = 33.5 bits (73), Expect = 0.24
 Identities = 13/55 (23%), Positives = 28/55 (50%)
 Frame = +2

Query: 143 ISFLNFRFLLSLKLFLVMGISWIFEIASFAHGKSHIIWKIMDIFNCLQGVIIFLL 307
           I   ++ ++ S+ L     I+W+  +  FA G  + +W+ +    C+ G+ + LL
Sbjct: 56  IKAYHYSYITSVNLLNCWTITWVMILTRFALGTRYSLWQFVGAGTCMTGLALVLL 110


>05_05_0023 +
           21605803-21605917,21606054-21606148,21606261-21606318,
           21606458-21606652,21607001-21607080,21607182-21607247,
           21607572-21607680,21608161-21608247,21608315-21608393,
           21608490-21608622
          Length = 338

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 11/57 (19%), Positives = 28/57 (49%)
 Frame = +2

Query: 137 VIISFLNFRFLLSLKLFLVMGISWIFEIASFAHGKSHIIWKIMDIFNCLQGVIIFLL 307
           +++    + ++ S+ L     + W+  +  +A G  +  W+I+    C+ G+ + LL
Sbjct: 89  LVVKAYQYSYITSVTLLDCWTVVWVVILTWYALGTRYSFWQIVGAGTCVAGLALVLL 145


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,491,816
Number of Sequences: 37544
Number of extensions: 289647
Number of successful extensions: 651
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)