Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_E19
         (924 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec...    42   6e-04
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l...    42   6e-04
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr...    39   0.006
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr...    39   0.006
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l...    39   0.006
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l...    39   0.006
U51998-2|AAA96078.2|  187|Caenorhabditis elegans Hypothetical pr...    30   2.7  

>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
            protein 2 protein.
          Length = 1338

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +2

Query: 173  SLKLFLVMGISWIFEIASFAHGKSHIIWK-IMDIFNCLQGVIIFLLLVVLRKKV 331
            S  L  ++GI+WIF   +   G +   +  I  I NC QG+ IF+L VVL +KV
Sbjct: 1087 SATLLCLLGITWIFGFLTAVKGGTGTAFAWIFTILNCTQGIFIFVLHVVLNEKV 1140


>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
            protein LAT-2 protein.
          Length = 1338

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +2

Query: 173  SLKLFLVMGISWIFEIASFAHGKSHIIWK-IMDIFNCLQGVIIFLLLVVLRKKV 331
            S  L  ++GI+WIF   +   G +   +  I  I NC QG+ IF+L VVL +KV
Sbjct: 1087 SATLLCLLGITWIFGFLTAVKGGTGTAFAWIFTILNCTQGIFIFVLHVVLNEKV 1140


>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
           protein B0457.1b protein.
          Length = 1012

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 19/59 (32%), Positives = 35/59 (59%)
 Frame = +2

Query: 173 SLKLFLVMGISWIFEIASFAHGKSHIIWKIMDIFNCLQGVIIFLLLVVLRKKVIQNLAN 349
           SL L  ++G++WIF +      +S ++  +  I N LQG+ IFL  VV  +K+ +++ +
Sbjct: 745 SLALASLLGVTWIFGLFWVEDSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKDVGH 803


>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
           protein B0457.1a protein.
          Length = 1014

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 19/59 (32%), Positives = 35/59 (59%)
 Frame = +2

Query: 173 SLKLFLVMGISWIFEIASFAHGKSHIIWKIMDIFNCLQGVIIFLLLVVLRKKVIQNLAN 349
           SL L  ++G++WIF +      +S ++  +  I N LQG+ IFL  VV  +K+ +++ +
Sbjct: 747 SLALASLLGVTWIFGLFWVEDSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKDVGH 805


>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
           protein LAT-1B protein.
          Length = 1012

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 19/59 (32%), Positives = 35/59 (59%)
 Frame = +2

Query: 173 SLKLFLVMGISWIFEIASFAHGKSHIIWKIMDIFNCLQGVIIFLLLVVLRKKVIQNLAN 349
           SL L  ++G++WIF +      +S ++  +  I N LQG+ IFL  VV  +K+ +++ +
Sbjct: 745 SLALASLLGVTWIFGLFWVEDSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKDVGH 803


>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
           protein LAT-1A protein.
          Length = 1014

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 19/59 (32%), Positives = 35/59 (59%)
 Frame = +2

Query: 173 SLKLFLVMGISWIFEIASFAHGKSHIIWKIMDIFNCLQGVIIFLLLVVLRKKVIQNLAN 349
           SL L  ++G++WIF +      +S ++  +  I N LQG+ IFL  VV  +K+ +++ +
Sbjct: 747 SLALASLLGVTWIFGLFWVEDSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKDVGH 805


>U51998-2|AAA96078.2|  187|Caenorhabditis elegans Hypothetical
           protein C12D12.3 protein.
          Length = 187

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
 Frame = +2

Query: 137 VIISFLNFRFLLSLKLF--LVMGISWIFEIASFAHGKSHIIWK--IMDIFNCLQGV---I 295
           V+I  L   F  ++ LF  LV G  WI  + +    +  ++W   I+ I   + GV   +
Sbjct: 47  VVIVPLTIGFFDTISLFQILVTGSIWIMAMIALNRHRHTLLWPIIILKISEIILGVFLIV 106

Query: 296 IFLLLVVLRKKVIQNL 343
           I  LL V+R++V+  L
Sbjct: 107 IAALLAVVRRRVLLRL 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,051,893
Number of Sequences: 27780
Number of extensions: 285352
Number of successful extensions: 719
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)