Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_E18
         (922 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z36753-6|CAA85335.1|  103|Caenorhabditis elegans Hypothetical pr...    42   5e-04
AF292050-1|AAG41146.1|  103|Caenorhabditis elegans 2I146 protein.      42   5e-04
Z19157-3|CAA79566.3|  395|Caenorhabditis elegans Hypothetical pr...    40   0.003
Z47073-1|CAA87371.3|  931|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>Z36753-6|CAA85335.1|  103|Caenorhabditis elegans Hypothetical
           protein T09A5.7 protein.
          Length = 103

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
 Frame = +2

Query: 251 MNSIGEECTDLKKKYDDCFNTWFSERFL----KGDQDDSVCAGIFKIYQECVKNAMKQQ- 415
           M+SI  EC  LK+ YD CF T F ++F+    +     + C  +  +Y+ CV+  +  Q 
Sbjct: 6   MSSIFPECDHLKQIYDKCF-TEFFQKFITPNYRHQYAVNPCERLHDVYKRCVEERLATQR 64

Query: 416 --SIDFKEIDKDILGTENE 466
              ID  EI K+ L T+++
Sbjct: 65  PFEIDLDEIRKEYLNTDDD 83


>AF292050-1|AAG41146.1|  103|Caenorhabditis elegans 2I146 protein.
          Length = 103

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
 Frame = +2

Query: 251 MNSIGEECTDLKKKYDDCFNTWFSERFL----KGDQDDSVCAGIFKIYQECVKNAMKQQ- 415
           M+SI  EC  LK+ YD CF T F ++F+    +     + C  +  +Y+ CV+  +  Q 
Sbjct: 6   MSSIFPECDHLKQIYDKCF-TEFFQKFITPNYRHQYAVNPCERLHDVYKRCVEERLATQR 64

Query: 416 --SIDFKEIDKDILGTENE 466
              ID  EI K+ L T+++
Sbjct: 65  PFEIDLDEIRKEYLNTDDD 83


>Z19157-3|CAA79566.3|  395|Caenorhabditis elegans Hypothetical
           protein ZC84.4 protein.
          Length = 395

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 24/95 (25%), Positives = 46/95 (48%)
 Frame = -3

Query: 599 IITEILVXAWNLKKLAQGYCNRLWV*RHRPIWVVSYYLHLVVFCIHFQCLRYPYLFL*NQ 420
           ++T I V  W    ++  + NR+W+   + I ++SY++HL+ +     C+ YP +F    
Sbjct: 258 LLTVIYVLCWTPYWVSM-FANRIWIMEKKSIIIISYFIHLLPY---ISCVAYPLIFTLLN 313

Query: 419 CFAVSLHS*HILDKF*IFQRKQNHLDRLLRTFPRT 315
               S H+  + D+   F+   +     +RT  RT
Sbjct: 314 RGIRSAHAKIVADQRRRFRSLTDEASSQIRTAIRT 348


>Z47073-1|CAA87371.3|  931|Caenorhabditis elegans Hypothetical
           protein ZC506.1 protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 546 SLGKFLKIPCXYQDFSDNRLTVKEE 620
           S+ K++K+PC +    D R  VKE+
Sbjct: 407 SINKYVKVPCGFAALKDIRTMVKED 431


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,166,682
Number of Sequences: 27780
Number of extensions: 333119
Number of successful extensions: 769
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)