Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_E14
(927 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 190 2e-49
SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces pombe... 67 3e-12
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 31 0.23
SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|... 29 0.70
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 1.2
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 29 1.2
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 27 2.8
SPAC31G5.18c |||ubiquitin family, human C1ORF55 related|Schizosa... 27 5.0
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 27 5.0
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 26 6.6
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 26 8.7
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 26 8.7
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 190 bits (463), Expect = 2e-49
Identities = 89/196 (45%), Positives = 131/196 (66%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
MLRR R RR+++Y+++ E ++ + K+ ++++LE N ++ DL++D+ LQK +Y+
Sbjct: 1 MLRRAVRERRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQEDS-QLQKDYKYD 59
Query: 360 DKGPERVAVIGGFSGGANTLNSQDDEYRYAGVEDPKIMITTSREPSARLKMFVKELRLIF 539
+ + T + DDEY G +PK+++TTSREPS+RL F KE+RL+
Sbjct: 60 ESRATQ----------EETETNLDDEYHRLGEREPKVLVTTSREPSSRLAQFAKEVRLLI 109
Query: 540 PNSQRMNRGGYEMSQLIHACRAXDVTDFIVVHEHRGVPDSLVICHLPYGPTASFTLSGVV 719
PNS R+NRG + L+ A RA D+TD +++HEHRG+PD LVI HLPYGPT SF+L VV
Sbjct: 110 PNSYRLNRGNIVVGSLVEAARANDITDIVILHEHRGIPDGLVISHLPYGPTLSFSLHNVV 169
Query: 720 MRHDIPDLGPMSEQYP 767
+RHDIP+ G MSE YP
Sbjct: 170 LRHDIPNTGTMSEAYP 185
>SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 306
Score = 67.3 bits (157), Expect = 3e-12
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 6/177 (3%)
Frame = +3
Query: 255 QAKKDQIKRSLEENIPIHGDLRKDAIALQKRIE--YEDKGPERVAVIGGFSGGANTLNSQ 428
Q KD+++R E D K + L + I E K +I +
Sbjct: 20 QKNKDKLERRKERAKEEEKDPEKKRLRLSENIPATIESKRVYDETIIEDKPDEELQAELK 79
Query: 429 DDEYRYAGVED---PKIMITTSREPSARLKMFVKELRLIFPNSQ-RMNRGGYEMSQLIHA 596
DDE+ E+ PK+++TTS+ S + F EL FPN++ R G E+ ++ A
Sbjct: 80 DDEFSAYFSEERKVPKLLVTTSKRASRKCYDFASELLDCFPNAEFRKRTGDIEVHEIAEA 139
Query: 597 CRAXDVTDFIVVHEHRGVPDSLVICHLPYGPTASFTLSGVVMRHDIPDLGPMSEQYP 767
TD +V++E R ++L + HLP GP+ FTLS + +I + G + P
Sbjct: 140 AAKRGYTDLLVLNEDRKKTNALTLVHLPNGPSFYFTLSNLQTAKEISNHGRSTGHIP 196
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 31.1 bits (67), Expect = 0.23
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 159 YSNDKPKM-LRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIA 335
Y+ ++ KM R Q++ + AE+ K + + I S+E NI +KD +
Sbjct: 1056 YTAEELKMKYRSQSQFTTTPDILRKAEKSMKKLDQRVSLIPSSIEFNIKT----QKDKVE 1111
Query: 336 LQKRIEYEDKGPERV--AVIGG 395
+K E KGP+ + A++GG
Sbjct: 1112 FEKNYEKSKKGPDVIANALVGG 1133
>SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 29.5 bits (63), Expect = 0.70
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 46 KILTSVCQFVTRVFL*LFTNKHLKH*FKQK*NWLSNSTIVTTNQKCCD 189
KI S+C+++ +L LF + + K N +SN+T+V +CC+
Sbjct: 80 KIDPSICKWILDTYLPLFKKSNNAYPSKIAFNPISNTTLVLFLTECCN 127
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -3
Query: 466 FGSSTPAYLYSSSCELSVFAPPLNPPITATLSGPLSSYS 350
+G +TP +SS E S+F+ P T + S P+SSYS
Sbjct: 73 YGYATP----TSSSEPSIFSESATPSETNSYSSPVSSYS 107
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +3
Query: 219 YRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYED 362
+RKS +E +KS + + + + E + + D+R D L ++++ D
Sbjct: 214 WRKSTDEWRKSTDERLENLLNIVREILDVQRDMRNDLSNLTRKVDRMD 261
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 692 CWTIWEVAYYQTVWNSSMLMYNYEICYIXGSTGMNQL*HLITTSVHTL--TVRKY*PQFF 519
CW + ++A+Y N S+++ N I STG N+ L+ ++ L V Y P ++
Sbjct: 354 CWFLLDIAFYGVNLNQSVILKN-----IGFSTGTNEYRTLMKNAIGNLIIAVAGYVPGYW 408
Query: 518 Y 516
+
Sbjct: 409 F 409
>SPAC31G5.18c |||ubiquitin family, human C1ORF55
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 263
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 189 RQARLRREYLYRKSAEEKQKSIQAKKDQIKRSL 287
RQA+ EYL +K AE + K +AKK ++ + L
Sbjct: 124 RQAKELSEYLAKKPAETRAKK-EAKKQKLNKVL 155
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +3
Query: 234 EEKQKSIQAKKDQIKRSLEENIPIHGD----LRKDAIALQKRIEY 356
++K K Q KDQ +++EE+ + L D ++L+KR+EY
Sbjct: 73 QQKDKLQQENKDQELKNIEESYKKLEEKTEHLSDDNVSLEKRVEY 117
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 156 NYSNDKPKMLRRQARLRREYLYRKSAEEKQ 245
N N+ + +ARL REYL AEE++
Sbjct: 339 NLINEDEFSIANRARLEREYLQSDDAEEQE 368
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 141 LVIEFNYSNDKPKMLRRQARLRREYLYR--KSAEEKQKSIQAKKDQIKRSLEEN 296
+ +E + S R+Q LRRE L + K+AE K++++ + +I++ L+ +
Sbjct: 494 IAVELDLSLGAFANARKQYELRREALIKETKTAEAASKALKSTQRKIEQDLKRS 547
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 692 CWTIWEVAYYQTVWNSSMLMYNYEICYIXGSTGMNQL*HLITTSVHTL--TVRKY*PQFF 519
CW + ++A+Y N S+++ N I S+G N+ L+ ++ L V Y P ++
Sbjct: 355 CWFLLDIAFYGVNLNQSVILKN-----IGFSSGTNEYRTLMKNAIGNLIIAVAGYVPGYW 409
Query: 518 Y 516
+
Sbjct: 410 F 410
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,230,164
Number of Sequences: 5004
Number of extensions: 64408
Number of successful extensions: 209
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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