Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_E14
(927 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010042-1|AAH10042.1| 291|Homo sapiens IMP4, U3 small nucleola... 244 4e-64
AY364245-1|AAQ76804.1| 291|Homo sapiens hypothetical protein pr... 244 4e-64
AC132479-2|AAY24076.1| 291|Homo sapiens unknown protein. 244 4e-64
BC016051-1|AAH16051.1| 349|Homo sapiens brix domain containing ... 83 2e-15
AL844170-1|CAH71914.1| 349|Homo sapiens brix domain containing ... 83 2e-15
AL359762-2|CAH70204.1| 349|Homo sapiens brix domain containing ... 83 2e-15
AK022537-1|BAB14086.1| 349|Homo sapiens protein ( Homo sapiens ... 83 2e-15
AF322053-1|AAL37236.1| 349|Homo sapiens RNA processing factor 1... 83 2e-15
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 33 1.1
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 33 1.1
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 33 1.1
AY834276-1|AAV97884.1| 1042|Homo sapiens mitogen-activated prote... 32 2.6
AY212247-1|AAO32626.1| 1239|Homo sapiens Ste20 group protein kin... 32 2.6
AF096300-1|AAD16137.1| 1165|Homo sapiens HPK/GCK-like kinase HGK... 32 2.6
AC005035-1|AAY14969.1| 1260|Homo sapiens unknown protein. 32 2.6
AB014587-1|BAA31662.1| 1175|Homo sapiens KIAA0687 protein protein. 32 2.6
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 32 3.4
X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5 p... 32 3.4
BC008948-1|AAH08948.1| 726|Homo sapiens ankyrin repeat and zinc... 32 3.4
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 32 3.4
BC000238-1|AAH00238.1| 726|Homo sapiens ankyrin repeat and zinc... 32 3.4
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 32 3.4
AK023206-1|BAB14462.1| 726|Homo sapiens protein ( Homo sapiens ... 32 3.4
Y08612-1|CAA69904.1| 741|Homo sapiens 88kDa nuclear pore comple... 31 4.5
BC000335-1|AAH00335.1| 741|Homo sapiens nucleoporin 88kDa protein. 31 4.5
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 31 5.9
AK128517-1|BAC87476.1| 901|Homo sapiens protein ( Homo sapiens ... 31 7.9
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein. 31 7.9
>BC010042-1|AAH10042.1| 291|Homo sapiens IMP4, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 291
Score = 244 bits (597), Expect = 4e-64
Identities = 116/196 (59%), Positives = 149/196 (76%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
MLRR+ARLRREYLYRK+ EE Q+S Q +K++++R+LEEN I +LR++A+ALQ +E++
Sbjct: 1 MLRREARLRREYLYRKAREEAQRSAQERKERLRRALEENRLIPTELRREALALQGSLEFD 60
Query: 360 DKGPERVAVIGGFSGGANTLNSQDDEYRYAGVEDPKIMITTSREPSARLKMFVKELRLIF 539
D +GG + DDEYR+AGVEDPK+MITTSR+PS+RLKMF KEL+L+F
Sbjct: 61 D------------AGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVF 108
Query: 540 PNSQRMNRGGYEMSQLIHACRAXDVTDFIVVHEHRGVPDSLVICHLPYGPTASFTLSGVV 719
P +QRMNRG +E+ L+ AC+A VTD +VVHEHRG P L++ HLP+GPTA FTL VV
Sbjct: 109 PGAQRMNRGRHEVGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVV 168
Query: 720 MRHDIPDLGPMSEQYP 767
MRHDIPDLG MSE P
Sbjct: 169 MRHDIPDLGTMSEAKP 184
>AY364245-1|AAQ76804.1| 291|Homo sapiens hypothetical protein
protein.
Length = 291
Score = 244 bits (597), Expect = 4e-64
Identities = 116/196 (59%), Positives = 149/196 (76%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
MLRR+ARLRREYLYRK+ EE Q+S Q +K++++R+LEEN I +LR++A+ALQ +E++
Sbjct: 1 MLRREARLRREYLYRKAREEAQRSAQERKERLRRALEENRLIPTELRREALALQGSLEFD 60
Query: 360 DKGPERVAVIGGFSGGANTLNSQDDEYRYAGVEDPKIMITTSREPSARLKMFVKELRLIF 539
D +GG + DDEYR+AGVEDPK+MITTSR+PS+RLKMF KEL+L+F
Sbjct: 61 D------------AGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVF 108
Query: 540 PNSQRMNRGGYEMSQLIHACRAXDVTDFIVVHEHRGVPDSLVICHLPYGPTASFTLSGVV 719
P +QRMNRG +E+ L+ AC+A VTD +VVHEHRG P L++ HLP+GPTA FTL VV
Sbjct: 109 PGAQRMNRGRHEVGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVV 168
Query: 720 MRHDIPDLGPMSEQYP 767
MRHDIPDLG MSE P
Sbjct: 169 MRHDIPDLGTMSEAKP 184
>AC132479-2|AAY24076.1| 291|Homo sapiens unknown protein.
Length = 291
Score = 244 bits (597), Expect = 4e-64
Identities = 116/196 (59%), Positives = 149/196 (76%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
MLRR+ARLRREYLYRK+ EE Q+S Q +K++++R+LEEN I +LR++A+ALQ +E++
Sbjct: 1 MLRREARLRREYLYRKAREEAQRSAQERKERLRRALEENRLIPTELRREALALQGSLEFD 60
Query: 360 DKGPERVAVIGGFSGGANTLNSQDDEYRYAGVEDPKIMITTSREPSARLKMFVKELRLIF 539
D +GG + DDEYR+AGVEDPK+MITTSR+PS+RLKMF KEL+L+F
Sbjct: 61 D------------AGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVF 108
Query: 540 PNSQRMNRGGYEMSQLIHACRAXDVTDFIVVHEHRGVPDSLVICHLPYGPTASFTLSGVV 719
P +QRMNRG +E+ L+ AC+A VTD +VVHEHRG P L++ HLP+GPTA FTL VV
Sbjct: 109 PGAQRMNRGRHEVGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVV 168
Query: 720 MRHDIPDLGPMSEQYP 767
MRHDIPDLG MSE P
Sbjct: 169 MRHDIPDLGTMSEAKP 184
>BC016051-1|AAH16051.1| 349|Homo sapiens brix domain containing 5
protein.
Length = 349
Score = 82.6 bits (195), Expect = 2e-15
Identities = 40/95 (42%), Positives = 55/95 (57%)
Frame = +3
Query: 462 PKIMITTSREPSARLKMFVKELRLIFPNSQRMNRGGYEMSQLIHACRAXDVTDFIVVHEH 641
PKI+ITTS P R ++L + PNS R G + ++I C A D TD IV++E
Sbjct: 142 PKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINED 201
Query: 642 RGVPDSLVICHLPYGPTASFTLSGVVMRHDIPDLG 746
R P+ L++ HLP GPTA F +S V +R +I G
Sbjct: 202 RKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRG 236
>AL844170-1|CAH71914.1| 349|Homo sapiens brix domain containing 5
protein.
Length = 349
Score = 82.6 bits (195), Expect = 2e-15
Identities = 40/95 (42%), Positives = 55/95 (57%)
Frame = +3
Query: 462 PKIMITTSREPSARLKMFVKELRLIFPNSQRMNRGGYEMSQLIHACRAXDVTDFIVVHEH 641
PKI+ITTS P R ++L + PNS R G + ++I C A D TD IV++E
Sbjct: 142 PKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINED 201
Query: 642 RGVPDSLVICHLPYGPTASFTLSGVVMRHDIPDLG 746
R P+ L++ HLP GPTA F +S V +R +I G
Sbjct: 202 RKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRG 236
>AL359762-2|CAH70204.1| 349|Homo sapiens brix domain containing 5
protein.
Length = 349
Score = 82.6 bits (195), Expect = 2e-15
Identities = 40/95 (42%), Positives = 55/95 (57%)
Frame = +3
Query: 462 PKIMITTSREPSARLKMFVKELRLIFPNSQRMNRGGYEMSQLIHACRAXDVTDFIVVHEH 641
PKI+ITTS P R ++L + PNS R G + ++I C A D TD IV++E
Sbjct: 142 PKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINED 201
Query: 642 RGVPDSLVICHLPYGPTASFTLSGVVMRHDIPDLG 746
R P+ L++ HLP GPTA F +S V +R +I G
Sbjct: 202 RKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRG 236
>AK022537-1|BAB14086.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ12475 fis, clone NT2RM1000962. ).
Length = 349
Score = 82.6 bits (195), Expect = 2e-15
Identities = 40/95 (42%), Positives = 55/95 (57%)
Frame = +3
Query: 462 PKIMITTSREPSARLKMFVKELRLIFPNSQRMNRGGYEMSQLIHACRAXDVTDFIVVHEH 641
PKI+ITTS P R ++L + PNS R G + ++I C A D TD IV++E
Sbjct: 142 PKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINED 201
Query: 642 RGVPDSLVICHLPYGPTASFTLSGVVMRHDIPDLG 746
R P+ L++ HLP GPTA F +S V +R +I G
Sbjct: 202 RKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRG 236
>AF322053-1|AAL37236.1| 349|Homo sapiens RNA processing factor 1
protein.
Length = 349
Score = 82.6 bits (195), Expect = 2e-15
Identities = 40/95 (42%), Positives = 55/95 (57%)
Frame = +3
Query: 462 PKIMITTSREPSARLKMFVKELRLIFPNSQRMNRGGYEMSQLIHACRAXDVTDFIVVHEH 641
PKI+ITTS P R ++L + PNS R G + ++I C A D TD IV++E
Sbjct: 142 PKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINED 201
Query: 642 RGVPDSLVICHLPYGPTASFTLSGVVMRHDIPDLG 746
R P+ L++ HLP GPTA F +S V +R +I G
Sbjct: 202 RKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRG 236
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +3
Query: 165 NDKPKMLRRQARLRREYLYRKSAE--EKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIAL 338
ND K + Q LR + L ++ E++ ++ + +SL EN +GDL L
Sbjct: 3035 NDSLKEIH-QKELRIQQLNSNFSQLLEEKNTLSIQLCDTSQSLRENQQHYGDLLNHCAVL 3093
Query: 339 QKRIEYEDKGPERVAVIGGFSGGANTLNSQDDEYRYAGVEDPKIMITTSREPSARLKMFV 518
+K+++ GP + V G N ++ + D + +P+ + +++ + V
Sbjct: 3094 EKQVQELQAGPLNIDVAPGAPQEKNGVHRKSDPEE---LREPQQSFSEAQQQLCNTRQEV 3150
Query: 519 KELR 530
ELR
Sbjct: 3151 NELR 3154
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
Length = 3225
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +3
Query: 165 NDKPKMLRRQARLRREYLYRKSAE--EKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIAL 338
ND K + Q LR + L ++ E++ ++ + +SL EN +GDL L
Sbjct: 3001 NDSLKEIH-QKELRIQQLNSNFSQLLEEKNTLSIQLCDTSQSLRENQQHYGDLLNHCAVL 3059
Query: 339 QKRIEYEDKGPERVAVIGGFSGGANTLNSQDDEYRYAGVEDPKIMITTSREPSARLKMFV 518
+K+++ GP + V G N ++ + D + +P+ + +++ + V
Sbjct: 3060 EKQVQELQAGPLNIDVAPGAPQEKNGVHRKSDPEE---LREPQQSFSEAQQQLCNTRQEV 3116
Query: 519 KELR 530
ELR
Sbjct: 3117 NELR 3120
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
++RRQ LRR +K+K +Q ++++ +R EE + I +D + Q+ Y
Sbjct: 539 LMRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEDQMRRQREESYS 598
Query: 360 DKGPERVAVIGGFSGGANTLNSQDDEYRYAGVEDPKI 470
G GG +N D Y G + P +
Sbjct: 599 RMGYMDPRERDMRMGGGGAMN-MGDPYGSGGQKFPPL 634
>AY834276-1|AAV97884.1| 1042|Homo sapiens mitogen-activated protein
kinase kinase kinase kinase 4 isoform protein.
Length = 1042
Score = 32.3 bits (70), Expect = 2.6
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +3
Query: 171 KPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRI 350
+ ++L+ Q +E R+ E+QK I+ +K+Q +R LEE + R+ Q+R
Sbjct: 225 RQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQ-RRRLEEQQRREREARRQQEREQRRR 283
Query: 351 EYEDK 365
E E+K
Sbjct: 284 EQEEK 288
Score = 31.1 bits (67), Expect = 5.9
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +3
Query: 168 DKPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEE 293
++ + L R R+E R+ AEE+++ ++ +++ I+R LEE
Sbjct: 286 EEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEE 327
>AY212247-1|AAO32626.1| 1239|Homo sapiens Ste20 group protein kinase
HGK protein.
Length = 1239
Score = 32.3 bits (70), Expect = 2.6
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +3
Query: 171 KPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRI 350
+ ++L+ Q +E R+ E+QK I+ +K+Q +R LEE + R+ Q+R
Sbjct: 372 RQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQ-RRRLEEQQRREREARRQQEREQRRR 430
Query: 351 EYEDK 365
E E+K
Sbjct: 431 EQEEK 435
Score = 31.1 bits (67), Expect = 5.9
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +3
Query: 168 DKPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEE 293
++ + L R R+E R+ AEE+++ ++ +++ I+R LEE
Sbjct: 433 EEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEE 474
>AF096300-1|AAD16137.1| 1165|Homo sapiens HPK/GCK-like kinase HGK
protein.
Length = 1165
Score = 32.3 bits (70), Expect = 2.6
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +3
Query: 171 KPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRI 350
+ ++L+ Q +E R+ E+QK I+ +K+Q +R LEE + R+ Q+R
Sbjct: 372 RQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQ-RRRLEEQQRREREARRQQEREQRRR 430
Query: 351 EYEDK 365
E E+K
Sbjct: 431 EQEEK 435
Score = 31.1 bits (67), Expect = 5.9
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +3
Query: 168 DKPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEE 293
++ + L R R+E R+ AEE+++ ++ +++ I+R LEE
Sbjct: 433 EEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEE 474
>AC005035-1|AAY14969.1| 1260|Homo sapiens unknown protein.
Length = 1260
Score = 32.3 bits (70), Expect = 2.6
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +3
Query: 171 KPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRI 350
+ ++L+ Q +E R+ E+QK I+ +K+Q +R LEE + R+ Q+R
Sbjct: 312 RQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQ-RRRLEEQQRREREARRQQEREQRRR 370
Query: 351 EYEDK 365
E E+K
Sbjct: 371 EQEEK 375
Score = 31.1 bits (67), Expect = 5.9
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +3
Query: 168 DKPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEE 293
++ + L R R+E R+ AEE+++ ++ +++ I+R LEE
Sbjct: 373 EEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEE 414
>AB014587-1|BAA31662.1| 1175|Homo sapiens KIAA0687 protein protein.
Length = 1175
Score = 32.3 bits (70), Expect = 2.6
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +3
Query: 171 KPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRI 350
+ ++L+ Q +E R+ E+QK I+ +K+Q +R LEE + R+ Q+R
Sbjct: 335 RQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQ-RRRLEEQQRREREARRQQEREQRRR 393
Query: 351 EYEDK 365
E E+K
Sbjct: 394 EQEEK 398
Score = 31.1 bits (67), Expect = 5.9
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +3
Query: 168 DKPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEE 293
++ + L R R+E R+ AEE+++ ++ +++ I+R LEE
Sbjct: 396 EEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEE 437
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 31.9 bits (69), Expect = 3.4
Identities = 23/97 (23%), Positives = 41/97 (42%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
++RRQ LRR +K+K +Q ++++ +R EE + I ++ + Q+ Y
Sbjct: 539 LMRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYS 598
Query: 360 DKGPERVAVIGGFSGGANTLNSQDDEYRYAGVEDPKI 470
G GG +N D Y G + P +
Sbjct: 599 RMGYMDPRERDMRMGGGGAMN-MGDPYGSGGQKFPPL 634
>X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5
protein.
Length = 396
Score = 31.9 bits (69), Expect = 3.4
Identities = 23/97 (23%), Positives = 41/97 (42%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
++RRQ LRR +K+K +Q ++++ +R EE + I ++ + Q+ Y
Sbjct: 228 LMRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYS 287
Query: 360 DKGPERVAVIGGFSGGANTLNSQDDEYRYAGVEDPKI 470
G GG +N D Y G + P +
Sbjct: 288 RMGYMDPRERDMRMGGGGAMN-MGDPYGSGGQKFPPL 323
>BC008948-1|AAH08948.1| 726|Homo sapiens ankyrin repeat and zinc
finger domain containing 1 protein.
Length = 726
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 174 PKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRI 350
P+M RQA +RE + E+Q+ Q ++++ +R + D K A+A ++R+
Sbjct: 608 PEMEARQATRKREQKAARRQREEQQQRQQEQEEREREEQRRFAALSDREKRALAAERRL 666
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 31.9 bits (69), Expect = 3.4
Identities = 23/97 (23%), Positives = 41/97 (42%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
++RRQ LRR +K+K +Q ++++ +R EE + I ++ + Q+ Y
Sbjct: 466 LMRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYS 525
Query: 360 DKGPERVAVIGGFSGGANTLNSQDDEYRYAGVEDPKI 470
G GG +N D Y G + P +
Sbjct: 526 RMGYMDPRERDMRMGGGGAMN-MGDPYGSGGQKFPPL 561
>BC000238-1|AAH00238.1| 726|Homo sapiens ankyrin repeat and zinc
finger domain containing 1 protein.
Length = 726
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 174 PKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRI 350
P+M RQA +RE + E+Q+ Q ++++ +R + D K A+A ++R+
Sbjct: 608 PEMEARQATRKREQKAARRQREEQQQRQQEQEEREREEQRRFAALSDREKRALAAERRL 666
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.9 bits (69), Expect = 3.4
Identities = 23/97 (23%), Positives = 41/97 (42%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
++RRQ LRR +K+K +Q ++++ +R EE + I ++ + Q+ Y
Sbjct: 539 LMRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYS 598
Query: 360 DKGPERVAVIGGFSGGANTLNSQDDEYRYAGVEDPKI 470
G GG +N D Y G + P +
Sbjct: 599 RMGYMDPRERDMRMGGGGAMN-MGDPYGSGGQKFPPL 634
>AK023206-1|BAB14462.1| 726|Homo sapiens protein ( Homo sapiens
cDNA FLJ13144 fis, clone NT2RP3003278. ).
Length = 726
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 174 PKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRI 350
P+M RQA +RE + E+Q+ Q ++++ +R + D K A+A ++R+
Sbjct: 608 PEMEARQATRKREQKAARRQREEQQQRQQEQEEREREEQRRFAALSDREKRALAAERRL 666
>Y08612-1|CAA69904.1| 741|Homo sapiens 88kDa nuclear pore complex
protein protein.
Length = 741
Score = 31.5 bits (68), Expect = 4.5
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 132 KIKLVIEFNYSNDKPKMLRRQA-RLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIH 308
K K + + +Y ++ K LR A RL +Y + A+EKQ+ I + ++ S +P+
Sbjct: 598 KKKQLEDLSYCREERKSLREMAERLADKY---EEAKEKQEDIMNRMKKLLHSFHSELPVL 654
Query: 309 GDLRKD 326
D +D
Sbjct: 655 SDSERD 660
>BC000335-1|AAH00335.1| 741|Homo sapiens nucleoporin 88kDa protein.
Length = 741
Score = 31.5 bits (68), Expect = 4.5
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 132 KIKLVIEFNYSNDKPKMLRRQA-RLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIH 308
K K + + +Y ++ K LR A RL +Y + A+EKQ+ I + ++ S +P+
Sbjct: 598 KKKQLEDLSYCREERKSLREMAERLADKY---EEAKEKQEDIMNRMKKLLHSFHSELPVL 654
Query: 309 GDLRKD 326
D +D
Sbjct: 655 SDSERD 660
>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
Length = 1943
Score = 31.1 bits (67), Expect = 5.9
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 171 KPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKD 326
+ + LRR+ RRE R+ EE+++ Q +++Q + E+ + LR++
Sbjct: 335 REQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRRE 386
>AK128517-1|BAC87476.1| 901|Homo sapiens protein ( Homo sapiens
cDNA FLJ46675 fis, clone TRACH3009701, weakly similar
to Homo sapiens dynein, axonemal, heavy polypeptide 9
(DNAH9). ).
Length = 901
Score = 30.7 bits (66), Expect = 7.9
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 171 KPKMLRRQA---RLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQ 341
+PK +R A +LR + A+EK + + K + +K+ +E + +LRK + ++
Sbjct: 152 EPKRIRMNAALAQLREKQAALAEAQEKLREVAEKLEMLKKQYDEKLAQKEELRKKSEEME 211
Query: 342 KRIE 353
++E
Sbjct: 212 LKLE 215
>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
Length = 4464
Score = 30.7 bits (66), Expect = 7.9
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 171 KPKMLRRQA---RLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQ 341
+PK +R A +LR + A+EK + + K + +K+ +E + +LRK + ++
Sbjct: 3251 EPKRIRMNAALAQLREKQAALAEAQEKLREVAEKLEMLKKQYDEKLAQKEELRKKSEEME 3310
Query: 342 KRIE 353
++E
Sbjct: 3311 LKLE 3314
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,766,609
Number of Sequences: 237096
Number of extensions: 2197367
Number of successful extensions: 5177
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5147
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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