Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_E14
(927 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83246-2|CAB05841.1| 292|Caenorhabditis elegans Hypothetical pr... 215 5e-56
Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 36 0.054
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 36 0.054
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 36 0.054
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 32 0.51
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 32 0.51
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 32 0.51
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 31 1.2
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 31 1.5
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 31 1.5
U49945-1|AAC47925.1| 414|Caenorhabditis elegans Hypothetical pr... 30 2.0
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 30 2.0
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 30 2.0
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 30 2.0
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 30 2.0
AL110484-23|CAB54415.1| 153|Caenorhabditis elegans Hypothetical... 30 2.0
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 30 2.0
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 30 2.7
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 29 3.6
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 29 4.7
>Z83246-2|CAB05841.1| 292|Caenorhabditis elegans Hypothetical
protein ZK795.3 protein.
Length = 292
Score = 215 bits (524), Expect = 5e-56
Identities = 104/196 (53%), Positives = 142/196 (72%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
M+RR+ RLRRE+++RKS EEKQKS++ K+++I+ +LE N I +LRKDAI L K ++
Sbjct: 1 MIRRENRLRREFIFRKSLEEKQKSLEEKREKIRNALENNTKIDYNLRKDAIELAKGSDW- 59
Query: 360 DKGPERVAVIGGFSGGANTLNSQDDEYRYAGVEDPKIMITTSREPSARLKMFVKELRLIF 539
GG D EYR+AG +DPKI+ITTSR+PS+RLKMF KE++LIF
Sbjct: 60 --------------GGQQY--ETDSEYRWAGAQDPKIVITTSRDPSSRLKMFAKEMKLIF 103
Query: 540 PNSQRMNRGGYEMSQLIHACRAXDVTDFIVVHEHRGVPDSLVICHLPYGPTASFTLSGVV 719
PN+QR+NRG Y++ Q++ A +A D TD I+ E RG PD +++CHLP+GPTA F+++ VV
Sbjct: 104 PNAQRINRGHYDVKQVVQASKAQDSTDLIIFTETRGNPDGMLVCHLPFGPTAFFSMANVV 163
Query: 720 MRHDIPDLGPMSEQYP 767
MRHDIP+ G MSEQYP
Sbjct: 164 MRHDIPNCGTMSEQYP 179
>Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical
protein F44G4.1 protein.
Length = 384
Score = 74.1 bits (174), Expect = 1e-13
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Frame = +3
Query: 408 ANTLNSQDDEYRYAGVED-----------PKIMITTSREPSARLKMFVKELRLIFPNSQR 554
A +N +DDE + D PK+MIT + + F EL+ PNS+
Sbjct: 148 ATMVNEEDDEVEHDEANDEFAPYFNRETSPKVMITMTPKAKITTFKFCFELQKCIPNSEI 207
Query: 555 MNRGGYEMSQLIHACRAXDVTDFIVVHEHRGVPDSLVICHLPYGPTASFTLSGVVMRHDI 734
R + +I + + TD +VVHE R P+ ++ CHLP GPTA F ++ + D+
Sbjct: 208 FTRKNVLLKTIIEQAKEREFTDLLVVHEDRKKPNGIIFCHLPEGPTAYFKINSLTFTQDL 267
Query: 735 PDLGPMSEQYP 767
G + +P
Sbjct: 268 KKFGESTSHFP 278
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.054
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +3
Query: 192 QARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYEDKGP 371
+ R R+EY RK E + +++ K ++E + L+++ IALQKR++ ++
Sbjct: 5 EVRKRKEYAERKVKERHAALRKEAEEKRKHTVEHRERVQSVLKREQIALQKRMQQLNEDE 64
Query: 372 ERVAV 386
ER V
Sbjct: 65 ERKKV 69
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 35.5 bits (78), Expect = 0.054
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +3
Query: 192 QARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYEDKGP 371
+ R R+EY RK E + +++ K ++E + L+++ IALQKR++ ++
Sbjct: 5 EVRKRKEYAERKVKERHAALRKEAEEKRKHTVEHRERVQSVLKREQIALQKRMQQLNEDE 64
Query: 372 ERVAV 386
ER V
Sbjct: 65 ERKKV 69
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 35.5 bits (78), Expect = 0.054
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +3
Query: 192 QARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYEDKGP 371
+ R R+EY RK E + +++ K ++E + L+++ IALQKR++ ++
Sbjct: 5 EVRKRKEYAERKVKERHAALRKEAEEKRKHTVEHRERVQSVLKREQIALQKRMQQLNEDE 64
Query: 372 ERVAV 386
ER V
Sbjct: 65 ERKKV 69
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
+L++ A L + A E+ + +A + R LEE++ + + R DA+ Q++IE E
Sbjct: 1316 LLKKNASLDMQLSELTEASEEDRRTRATLNNKIRQLEEDLAVAVEARDDALDAQEKIEKE 1375
Query: 360 DK 365
K
Sbjct: 1376 VK 1377
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
+L++ A L + A E+ + +A + R LEE++ + + R DA+ Q++IE E
Sbjct: 1316 LLKKNASLDMQLSELTEASEEDRRTRATLNNKIRQLEEDLAVAVEARDDALDAQEKIEKE 1375
Query: 360 DK 365
K
Sbjct: 1376 VK 1377
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 180 MLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYE 359
+L++ A L + A E+ + +A + R LEE++ + + R DA+ Q++IE E
Sbjct: 1316 LLKKNASLDMQLSELTEASEEDRRTRATLNNKIRQLEEDLAVAVEARDDALDAQEKIEKE 1375
Query: 360 DK 365
K
Sbjct: 1376 VK 1377
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/121 (20%), Positives = 56/121 (46%)
Frame = +3
Query: 225 KSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYEDKGPERVAVIGGFSG 404
K E++ + ++ +++ I+ +E+ DL++D +LQK++E + E + ++G
Sbjct: 229 KELEDEVELVKEERENIRLLVEDKEDEVADLKQDTESLQKQLE---ENQEELEIVGNM-- 283
Query: 405 GANTLNSQDDEYRYAGVEDPKIMITTSREPSARLKMFVKELRLIFPNSQRMNRGGYEMSQ 584
+ D+ + V K + E + K +L+ NSQ+ N+ +M +
Sbjct: 284 -LREEQGKVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQLLKRNSQQQNQQSLDMRK 342
Query: 585 L 587
L
Sbjct: 343 L 343
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Frame = +3
Query: 219 YRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYEDKGPERVAVIGGF 398
YRK A+ Q S + NI + + Q Y + + G
Sbjct: 1216 YRKLAQRAQMSRDVLTSSVFAGSNGNIQYSST--QAGMRGQANNVYANNDLHERLMNGSI 1273
Query: 399 SGGANTLNSQDDEYRYAGVED------PKIMITTSREPSARLKMFVKELRL 533
GA+ +++DD YRY GVE+ PK+ TT+R S + + + + RL
Sbjct: 1274 DSGASRQDNRDDYYRY-GVEEKISEEVPKVAPTTARPTSELVTVQITKQRL 1323
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Frame = +3
Query: 219 YRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYEDKGPERVAVIGGF 398
YRK A+ Q S + NI + + Q Y + + G
Sbjct: 1216 YRKLAQRAQMSRDVLTSSVFAGSNGNIQYSST--QAGMRGQANNVYANNDLHERLMNGSI 1273
Query: 399 SGGANTLNSQDDEYRYAGVED------PKIMITTSREPSARLKMFVKELRL 533
GA+ +++DD YRY GVE+ PK+ TT+R S + + + + RL
Sbjct: 1274 DSGASRQDNRDDYYRY-GVEEKISEEVPKVAPTTARPTSELVTVQITKQRL 1323
>U49945-1|AAC47925.1| 414|Caenorhabditis elegans Hypothetical
protein C02H7.2 protein.
Length = 414
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 695 CCWTIWEVAYYQTVWNSSMLMYNY 624
CC T+W+ YY TV+ +Y Y
Sbjct: 170 CCHTLWDSNYYITVYEKPDTLYKY 193
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 225 KSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYEDKGPER 377
+ A E+ ++ + + D++KR LEE D + AL +RI ++ ER
Sbjct: 23 RQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEEDLER 73
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 225 KSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYEDKGPER 377
+ A E+ ++ + + D++KR LEE D + AL +RI ++ ER
Sbjct: 23 RQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEEDLER 73
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 225 KSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYEDKGPER 377
+ A E+ ++ + + D++KR LEE D + AL +RI ++ ER
Sbjct: 23 RQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEEDLER 73
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 225 KSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYEDKGPER 377
+ A E+ ++ + + D++KR LEE D + AL +RI ++ ER
Sbjct: 23 RQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEEDLER 73
>AL110484-23|CAB54415.1| 153|Caenorhabditis elegans Hypothetical
protein Y38E10A.23 protein.
Length = 153
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Frame = +3
Query: 228 SAEEKQKSIQAKKDQIKRSLEENIPI------H---GDLRKDAIALQKRIEYEDKGPERV 380
S++ +KS +A +D EN+ H GD+ + +QK + D+ PE+V
Sbjct: 21 SSKNTEKSAEASEDTAPVYSRENLEFLQKAMTHSFGGDMEQGPSVIQKFFHFGDENPEKV 80
Query: 381 AVIGGFSGGANTLNSQDDEYRYAG 452
+ A L Q D+Y G
Sbjct: 81 VMNPALLAAAKELADQLDDYLIMG 104
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 225 KSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYEDKGPER 377
+ A E+ ++ + + D++KR LEE D + AL +RI ++ ER
Sbjct: 23 RQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEEDLER 73
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 225 KSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQKRIEYEDKGPERV 380
+ EKQK + ++ + +R E I L KD +A +KR++ E K ER+
Sbjct: 89 REEREKQKREKMEEREKQRIERERILEEKRLEKDKLAEEKRLDKEKKEKERL 140
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/90 (26%), Positives = 41/90 (45%)
Frame = +3
Query: 165 NDKPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDLRKDAIALQK 344
+DK K+L Q R ++E L K E S + KK++ + S E++ D R ++
Sbjct: 566 DDKEKLLETQERKKKEKLKEKERELLAVSDEVKKEEPESSDEDD--NRKDQRTPREDRRR 623
Query: 345 RIEYEDKGPERVAVIGGFSGGANTLNSQDD 434
+E +D+ +R I A S +D
Sbjct: 624 SVERQDQREDRKERIKSPDDRAERRRSPED 653
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/80 (22%), Positives = 35/80 (43%)
Frame = +3
Query: 138 KLVIEFNYSNDKPKMLRRQARLRREYLYRKSAEEKQKSIQAKKDQIKRSLEENIPIHGDL 317
K +++ + DK K + + +E +K K+K + + ++RS +
Sbjct: 369 KDLVDSDGEEDKEKKTKMEMEKEKEKTRKKEENNKRKEKKEAEKLLERSYKRAEQARVRY 428
Query: 318 RKDAIALQKRIEYEDKGPER 377
K I L+KR + E+K R
Sbjct: 429 EKTGIRLEKRRQLEEKRRRR 448
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,006,370
Number of Sequences: 27780
Number of extensions: 371751
Number of successful extensions: 1084
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -