Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_E08
(736 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 39 8e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.032
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.074
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.39
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.39
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 4.8
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.7 bits (86), Expect = 8e-04
Identities = 34/123 (27%), Positives = 37/123 (30%), Gaps = 5/123 (4%)
Frame = +2
Query: 380 SXGGPPXTXRSXXXLXXPXP---PPXXXPPPXXXPXXXPXXXPPXXXXXPGAAAPPPXXP 550
S PP S P P PP P P P PP P AAPP P
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPK--PSVAAPPVPAP 1155
Query: 551 XXXFXXPPXLXRXXXXXXLPXXPIXPVPXXXSSXPPRXXXFXXXPXPXPA--APPXXXPX 724
P P I PVP + PP P P P+ PP P
Sbjct: 1156 SGAPPVPKPSVAAPPVPA-PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Query: 725 XSP 733
+P
Sbjct: 1215 TAP 1217
Score = 34.7 bits (76), Expect = 0.014
Identities = 27/103 (26%), Positives = 31/103 (30%), Gaps = 2/103 (1%)
Frame = +2
Query: 431 PXPPPXXXPPPXXXPXXXPXXXPPXXXXXPGAAAPPPXXPXXXFXXPPXLXRXXXXXXLP 610
P P P PP P PP P ++ P P P P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPV----PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Query: 611 XXPIXPVPXXXSSXPPRXXXFXXXPXPXP--AAPPXXXPXXSP 733
PVP + PP P P P AAPP P +P
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 33.9 bits (74), Expect = 0.024
Identities = 30/117 (25%), Positives = 33/117 (28%), Gaps = 3/117 (2%)
Frame = +2
Query: 392 PPXTXRSXXXLXXPXPPPXXXP---PPXXXPXXXPXXXPPXXXXXPGAAAPPPXXPXXXF 562
PP S P P P P P P PP GA + PP P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 563 XXPPXLXRXXXXXXLPXXPIXPVPXXXSSXPPRXXXFXXXPXPXPAAPPXXXPXXSP 733
P I PVP + PP P P A PP P +P
Sbjct: 1072 EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP-------VPKPSVAVPPVPAPSGAP 1121
Score = 31.9 bits (69), Expect = 0.098
Identities = 34/126 (26%), Positives = 37/126 (29%), Gaps = 14/126 (11%)
Frame = +2
Query: 386 GGPPXTXRSXXXLXXPXP---PPXXXPPPXXXPXXXPXXXPPXXXXXPGAAAPP------ 538
G PP S P P PP P P P PP P AAPP
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPK--PSVAAPPVPAPSS 1176
Query: 539 --PXXPXXXFXXPPXLX-RXXXXXXLPXXPIXPVPXXXSSXPPRXXXFXXXPXPXPA--A 703
P P PP P + PVP ++ P P P P A
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Query: 704 PPXXXP 721
PP P
Sbjct: 1237 PPVPAP 1242
Score = 29.5 bits (63), Expect = 0.52
Identities = 28/97 (28%), Positives = 29/97 (29%)
Frame = +2
Query: 443 PXXXPPPXXXPXXXPXXXPPXXXXXPGAAAPPPXXPXXXFXXPPXLXRXXXXXXLPXXPI 622
P P P P PP P AAPP P P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPK--PSVAAPPVPKPSVAVPPVPA-PSGAPPVPKPSVAA 1130
Query: 623 XPVPXXXSSXPPRXXXFXXXPXPXPAAPPXXXPXXSP 733
PVP S PP P P AAPP P +P
Sbjct: 1131 PPVPVP-SGAPP-------VPKPSVAAPPVPAPSGAP 1159
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.032
Identities = 28/110 (25%), Positives = 30/110 (27%), Gaps = 4/110 (3%)
Frame = +2
Query: 392 PPXTXRSXXXLXXPXPPPX--XXPPPXXXPXXXPXXXPPXXXXXPGAAAPPPXXPXXXFX 565
PP RS P PP PPP PP + PP P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 566 XPPXLXRXXXXXXLPXXPIXPVPXXXSSXPPRXXXFXXXPXP--XPAAPP 709
P L P+ P S PP P PAAPP
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 29.1 bits (62), Expect = 0.69
Identities = 22/95 (23%), Positives = 24/95 (25%), Gaps = 2/95 (2%)
Frame = +2
Query: 455 PPPXXXPXXXPXXXPPXXXXXPGAAAPPPXXPXXXFXXPPXLXRXXXXXXLPXXPIXPVP 634
PPP P PP ++ PPP P P P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 635 XXXSSXPP--RXXXFXXXPXPXPAAPPXXXPXXSP 733
PP P P PA P P P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 27.5 bits (58), Expect = 2.1
Identities = 29/92 (31%), Positives = 32/92 (34%), Gaps = 3/92 (3%)
Frame = +2
Query: 440 PPXXXPP--PXXXPXXXPXXXPPXXXXXPGAAAP-PPXXPXXXFXXPPXLXRXXXXXXLP 610
PP PP P P P PP AA P PP P PP +P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP----IAPP------LPAGMP 464
Query: 611 XXPIXPVPXXXSSXPPRXXXFXXXPXPXPAAP 706
P P+P + PP P P PAAP
Sbjct: 465 AAP--PLPPAAPAPPP-------APAPAPAAP 487
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 431 PXPPPXXXPPPXXXPXXXPXXXPPXXXXXPGAAAPPPXXP 550
P PP PP PP P A AP P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 25.8 bits (54), Expect = 6.4
Identities = 22/82 (26%), Positives = 22/82 (26%), Gaps = 4/82 (4%)
Frame = +1
Query: 349 PXXPXXXGXLXXGGAPXNRAXPXXXXXPPPPPXXXPAP---PXXPXXXS-XXLPSXXXXX 516
P P G P PPPPP A P P S P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 517 SXXRXPPPRPXXXAFXPPXXXP 582
S R PPP A P P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPP 392
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 632 PXXXSSXPPRXXXFXXXPXPXPAAPPXXXPXXSP 733
P SS PP P P P PP SP
Sbjct: 234 PSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSP 267
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.074
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 431 PXPPPXXXPPPXXXPXXXPXXXPPXXXXXPGAAAPPPXXP 550
P P P PPP P PP G PPP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.17
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 431 PXPPPXXXPPPXXXPXXXPXXXPPXXXXXPGAAAPPPXXP 550
P P P P P P PP GA PPP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +1
Query: 412 PXXXXXPPPPPXXXPAPPXXPXXXSXXLPSXXXXXSXXRXPPPRPXXXA 558
P P P P P PP P P + PPP P A
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 422 LXXPXPPPXXXPPPXXXPXXXPXXXPPXXXXXPGAAAPPPXXPXXXFXXPP 574
L P PPP P P P P P PPP PP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +1
Query: 430 PPPPPXXXPAPPXXPXXXSXXLPSXXXXXSXXRXPPPRPXXXAFXPPXXXP 582
PPPPP P P +P PPP P PP P
Sbjct: 732 PPPPPPAVIVP--TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.9 bits (64), Expect = 0.39
Identities = 29/96 (30%), Positives = 29/96 (30%)
Frame = -1
Query: 457 RGRXXGGXGGXEXXXGXXGXGGPPRGXXXPXGXAPXGXGXXXXFXXXARXXXPXXKRGPP 278
RG GG GG G GGPP G P G G F G
Sbjct: 183 RGHNGGGFGGF-----GGGSGGPPPG--------PGGFGGFGGFGGEGHHHGGHGGFGGG 229
Query: 277 XHNXFXGAPXGXPGGXXXFXXXXXGXXXXPKXKGGG 170
F G P G GG F G P GGG
Sbjct: 230 P-GGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 27.9 bits (59), Expect = 1.6
Identities = 26/91 (28%), Positives = 27/91 (29%)
Frame = -3
Query: 659 GGGXRXXPGGPEXWAXXGGGXXXXXXGXXXGGXXAXXXGRGGGXRXXXXXWXXEGXXXXX 480
GGG P GP + GG G GG G GG EG
Sbjct: 194 GGGSGGPPPGPGGFGGFGG---FGGEGHHHGGHGGFGGGPGG----------FEGGPGGF 240
Query: 479 XXGXXGGAGXXXGGGGGXXXXXGXARXXGAP 387
G G G G GGG G G P
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 25.4 bits (53), Expect = 8.5
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -2
Query: 585 RXXXGGXXKXXXGXXGGGAAAPGXXXXXGGXXXGXXXGXXXGGGXXXGGGXG 430
R GG G GG PG GG G GG GGG G
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGG---EGHHHGGHGGFGGGPG 231
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.39
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -1
Query: 541 GGGGXGXXXXXGXXRXXRGXXXXAXXGGRGRXXGGXGGXEXXXGXXGXGGPPRG 380
GG G G G A GGRG GG GG G G RG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/53 (26%), Positives = 17/53 (32%)
Frame = +1
Query: 412 PXXXXXPPPPPXXXPAPPXXPXXXSXXLPSXXXXXSXXRXPPPRPXXXAFXPP 570
P PPP P P P LP + + PP P + PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Score = 26.6 bits (56), Expect = 3.7
Identities = 26/112 (23%), Positives = 28/112 (25%)
Frame = +2
Query: 371 GXXSXGGPPXTXRSXXXLXXPXPPPXXXPPPXXXPXXXPXXXPPXXXXXPGAAAPPPXXP 550
G GG P PP PP P PP P + A P P
Sbjct: 102 GGLFAGGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Query: 551 XXXFXXPPXLXRXXXXXXLPXXPIXPVPXXXSSXPPRXXXFXXXPXPXPAAP 706
P L P P S+ PP P P AP
Sbjct: 162 SKAPPIPSSLP-PPAQPAAPVKSPPSAPSLPSAVPPMPP--KVPPPPLSQAP 210
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 431 PXPPPXXXPPPXXXPXXXPXXXPPXXXXXPGAAAPPPXXP 550
P PPP PPP P PP P A+ P P
Sbjct: 1707 PPPPPMSVPPPPSAPPM--PAGPPSAPPPPLPASSAPSVP 1744
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +2
Query: 608 PXXPIXPVPXXXSSXPPRXXXFXXXPXPXPAAP 706
P + P S+ PP F P P P AP
Sbjct: 1505 PPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAP 1537
Score = 25.8 bits (54), Expect = 6.4
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 392 PPXTXRSXXXLXXPXPPPXXXPPPXXXPXXXPXXXPPXXXXXPGAAAPPPXXP 550
PP +S P P PPP P P PP P +APPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPP--PPPMSVPP--PPSAPPMPAGPP--SAPPPPLP 1736
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 3.7
Identities = 18/74 (24%), Positives = 20/74 (27%), Gaps = 1/74 (1%)
Frame = +2
Query: 440 PPXXXPPPXXXPXXXPXXXPPXXXXXPGA-AAPPPXXPXXXFXXPPXLXRXXXXXXLPXX 616
P PPP PP PG PPP PP +P
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Query: 617 PIXPVPXXXSSXPP 658
P+ P PP
Sbjct: 263 PMHHEPGEHMPPPP 276
Score = 26.6 bits (56), Expect = 3.7
Identities = 18/74 (24%), Positives = 20/74 (27%), Gaps = 1/74 (1%)
Frame = +2
Query: 440 PPXXXPPPXXXPXXXPXXXPPXXXXXPGA-AAPPPXXPXXXFXXPPXLXRXXXXXXLPXX 616
P PPP PP PG PPP PP +P
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Query: 617 PIXPVPXXXSSXPP 658
P+ P PP
Sbjct: 315 PMHHEPGEHMPPPP 328
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 4.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 431 PXPPPXXXPPPXXXPXXXPXXXPP 502
P PP PPP P P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,446,499
Number of Sequences: 5004
Number of extensions: 20315
Number of successful extensions: 180
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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