Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_E07
         (873 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC051700-1|AAH51700.1|  191|Homo sapiens chromosome 6 open readi...   101   3e-21
AL513547-2|CAI12315.1|  191|Homo sapiens protein ( ene, a PHD zi...   101   3e-21
AY358147-1|AAQ88514.1|  953|Homo sapiens UNC5D protein.                31   7.2  
AB055056-1|BAB83663.1|  948|Homo sapiens KIAA1777 protein (Unc5h...    31   7.2  
BC057783-1|AAH57783.1|  275|Homo sapiens SFRS2B protein protein.       30   9.5  

>BC051700-1|AAH51700.1|  191|Homo sapiens chromosome 6 open reading
           frame 120 protein.
          Length = 191

 Score =  101 bits (243), Expect = 3e-21
 Identities = 52/131 (39%), Positives = 82/131 (62%), Gaps = 2/131 (1%)
 Frame = +2

Query: 122 LLGIICASTLSSLFSALPERQPNK-LLLNVASGIVGAGNFTYWHLGYTGPLSIELRSLSG 298
           LL ++ +  LS    A  E  P + +LL+V  G +GAGN++Y  L + G + + +RSL G
Sbjct: 15  LLLLLASQVLSPGSCADEEEVPEEWVLLHVVQGQIGAGNYSYLRLNHEGKIVLRMRSLKG 74

Query: 299 DADLYV-AYHMRPGYEVSENEYSSTTCGLDVVYIPDDYLRPIGVGIFGHWAYEQSEYKIR 475
           DADLYV A  + P ++  + E  S TCG D V IP  + RP+G+G++GH ++ +SE++++
Sbjct: 75  DADLYVSASSLHPSFD--DYELQSATCGPDAVSIPAHFRRPVGIGVYGHPSHLESEFEMK 132

Query: 476 VYQDNTPVIYP 508
           VY D T   +P
Sbjct: 133 VYYDGTVEQHP 143


>AL513547-2|CAI12315.1|  191|Homo sapiens protein ( ene, a PHD zinc
           finger protein ).).
          Length = 191

 Score =  101 bits (243), Expect = 3e-21
 Identities = 52/131 (39%), Positives = 82/131 (62%), Gaps = 2/131 (1%)
 Frame = +2

Query: 122 LLGIICASTLSSLFSALPERQPNK-LLLNVASGIVGAGNFTYWHLGYTGPLSIELRSLSG 298
           LL ++ +  LS    A  E  P + +LL+V  G +GAGN++Y  L + G + + +RSL G
Sbjct: 15  LLLLLASQVLSPGSCADEEEVPEEWVLLHVVQGQIGAGNYSYLRLNHEGKIVLRMRSLKG 74

Query: 299 DADLYV-AYHMRPGYEVSENEYSSTTCGLDVVYIPDDYLRPIGVGIFGHWAYEQSEYKIR 475
           DADLYV A  + P ++  + E  S TCG D V IP  + RP+G+G++GH ++ +SE++++
Sbjct: 75  DADLYVSASSLHPSFD--DYELQSATCGPDAVSIPAHFRRPVGIGVYGHPSHLESEFEMK 132

Query: 476 VYQDNTPVIYP 508
           VY D T   +P
Sbjct: 133 VYYDGTVEQHP 143


>AY358147-1|AAQ88514.1|  953|Homo sapiens UNC5D protein.
          Length = 953

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 395 IPDDYLRPIGVGIFGHWAYEQSEYKIRVY-QDNTPVIYPRVMAGE 526
           I D  ++ + V +FG  +    +Y +RVY  DNTP  +  V++ E
Sbjct: 683 ITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQEVVSDE 727


>AB055056-1|BAB83663.1|  948|Homo sapiens KIAA1777 protein (Unc5h4)
           protein.
          Length = 948

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 395 IPDDYLRPIGVGIFGHWAYEQSEYKIRVY-QDNTPVIYPRVMAGE 526
           I D  ++ + V +FG  +    +Y +RVY  DNTP  +  V++ E
Sbjct: 678 ITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQEVVSDE 722


>BC057783-1|AAH57783.1|  275|Homo sapiens SFRS2B protein protein.
          Length = 275

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = +1

Query: 451 RTIRVQDPR-----VPGQYSGDLPQGDGRGGDLLQTQRVPRRRCXTRKAGP 588
           R +RVQ  R     +P    G+ P+G  RGG   +  R PRRR  +R  GP
Sbjct: 83  RELRVQVARYGRRDLPRSRQGE-PRGRSRGGGYGRRSRSPRRRHRSRSRGP 132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,483,357
Number of Sequences: 237096
Number of extensions: 2641472
Number of successful extensions: 9184
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9182
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)