Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_E03
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0622 - 8175226-8175312,8175674-8175763,8176370-8176457,817...    29   3.9  
07_01_0130 - 963856-965454                                             28   9.0  

>04_01_0622 -
           8175226-8175312,8175674-8175763,8176370-8176457,
           8177021-8177095,8177754-8177821,8177898-8177955,
           8178862-8178942,8179968-8180038,8180144-8180225,
           8182327-8182449,8183023-8183129,8183201-8183263,
           8183877-8183936,8184100-8184151,8185566-8185598,
           8185820-8185871,8185965-8186028,8186693-8186749,
           8186962-8187006,8187083-8187190,8188147-8188212,
           8188382-8188492,8190841-8191035,8191419-8191499,
           8191591-8191630,8191764-8191816
          Length = 669

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = -3

Query: 455 VSTFSSKTVRHDGHASLVLLVYI-GTTFMTALFFVFTIPFNIQVYDLRFNWIKINEGSQI 279
           + T+ SK     GH SLVL+V+I G TF       F        YD      K+  G+ I
Sbjct: 572 IQTYESKPETGVGHRSLVLVVFIGGVTFAEIAALRFLSSQEGMGYDFLVATTKVVNGNTI 631

Query: 278 NR 273
            R
Sbjct: 632 LR 633


>07_01_0130 - 963856-965454
          Length = 532

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = +2

Query: 77  LYSVLNLFLNSINNHQKVATYNEFLFHLNISLKNLSKPFSEHKNHGKWLLCN*HSNSIGL 256
           L SV  +  N   +H+    +      LNI    +   F E    G WL  + H+ S  L
Sbjct: 366 LASVSMMMFNVYFDHELYKNFTGPFMDLNIMASLIQATFYE----GNWLSLHAHTRSYFL 421

Query: 257 IKRFFGG*FEI 289
           ++R  G  FE+
Sbjct: 422 LRRGLGDDFEL 432


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,079,418
Number of Sequences: 37544
Number of extensions: 289313
Number of successful extensions: 460
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)