Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_E02
         (904 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK056157-1|BAB71106.1|  545|Homo sapiens protein ( Homo sapiens ...    31   5.7  
AB092439-1|BAC54285.1| 1205|Homo sapiens PAR3 beta alternatively...    31   7.6  
AB073472-1|BAC54035.1| 1104|Homo sapiens PAR3 beta protein.            31   7.6  
BC117411-1|AAI17412.1|  929|Homo sapiens receptor interacting pr...    30   10.0 
BC072406-1|AAH72406.1|  929|Homo sapiens receptor interacting pr...    30   10.0 
BC060870-1|AAH60870.2|  587|Homo sapiens RIPK5 protein protein.        30   10.0 
BC053627-1|AAH53627.1|  884|Homo sapiens receptor interacting pr...    30   10.0 
AY429674-1|AAS55390.1|  929|Homo sapiens dusty protein kinase pr...    30   10.0 
AY208850-1|AAP42418.1|  929|Homo sapiens dusty protein kinase pr...    30   10.0 

>AK056157-1|BAB71106.1|  545|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31595 fis, clone NT2RI2002517, weakly similar to
           Homo sapiens PAR3 mRNA. ).
          Length = 545

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 365 SKPSTSYDPTTNTIPNIEDSSNIL--REVLNYKKAELLRQPDVTDFLKAITKDLK 523
           ++PS S+    +  P + DS+  L  REVLN  + ELL  P   D L  +T+ ++
Sbjct: 151 TQPSASHPGGQSLKPVVPDSTQNLEDREVLNGVQTELLTSPKTKDTLSDMTRTVE 205


>AB092439-1|BAC54285.1| 1205|Homo sapiens PAR3 beta alternatively
           spliced form protein.
          Length = 1205

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 365 SKPSTSYDPTTNTIPNIEDSSNIL--REVLNYKKAELLRQPDVTDFLKAITKDLK 523
           ++PS S+    +  P + DS+  L  REVLN  + ELL  P   D L  +T+ ++
Sbjct: 151 TQPSASHPGGQSLKPVVPDSTQNLEDREVLNGVQTELLTSPRTKDTLSDMTRTVE 205


>AB073472-1|BAC54035.1| 1104|Homo sapiens PAR3 beta protein.
          Length = 1104

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 365 SKPSTSYDPTTNTIPNIEDSSNIL--REVLNYKKAELLRQPDVTDFLKAITKDLK 523
           ++PS S+    +  P + DS+  L  REVLN  + ELL  P   D L  +T+ ++
Sbjct: 151 TQPSASHPGGQSLKPVVPDSTQNLEDREVLNGVQTELLTSPRTKDTLSDMTRTVE 205


>BC117411-1|AAI17412.1|  929|Homo sapiens receptor interacting
           protein kinase 5 protein.
          Length = 929

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 709 YPLXDENFRIILEDCLSCVLIMGQD 783
           +P  +E +   + DCL C+LI+GQD
Sbjct: 96  FPPKEEKYLQQIVDCLPCILILGQD 120


>BC072406-1|AAH72406.1|  929|Homo sapiens receptor interacting
           protein kinase 5 protein.
          Length = 929

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 709 YPLXDENFRIILEDCLSCVLIMGQD 783
           +P  +E +   + DCL C+LI+GQD
Sbjct: 96  FPPKEEKYLQQIVDCLPCILILGQD 120


>BC060870-1|AAH60870.2|  587|Homo sapiens RIPK5 protein protein.
          Length = 587

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 709 YPLXDENFRIILEDCLSCVLIMGQD 783
           +P  +E +   + DCL C+LI+GQD
Sbjct: 96  FPPKEEKYLQQIVDCLPCILILGQD 120


>BC053627-1|AAH53627.1|  884|Homo sapiens receptor interacting
           protein kinase 5 protein.
          Length = 884

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 709 YPLXDENFRIILEDCLSCVLIMGQD 783
           +P  +E +   + DCL C+LI+GQD
Sbjct: 96  FPPKEEKYLQQIVDCLPCILILGQD 120


>AY429674-1|AAS55390.1|  929|Homo sapiens dusty protein kinase
           protein.
          Length = 929

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 709 YPLXDENFRIILEDCLSCVLIMGQD 783
           +P  +E +   + DCL C+LI+GQD
Sbjct: 96  FPPKEEKYLQQIVDCLPCILILGQD 120


>AY208850-1|AAP42418.1|  929|Homo sapiens dusty protein kinase
           protein.
          Length = 929

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 709 YPLXDENFRIILEDCLSCVLIMGQD 783
           +P  +E +   + DCL C+LI+GQD
Sbjct: 96  FPPKEEKYLQQIVDCLPCILILGQD 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,271,887
Number of Sequences: 237096
Number of extensions: 1581808
Number of successful extensions: 3552
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3552
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)