Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_E02
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81051-1|CAB02862.3| 677|Caenorhabditis elegans Hypothetical pr... 36 0.052
U21323-10|AAW30670.1| 805|Caenorhabditis elegans Hypothetical p... 31 0.85
U21323-9|AAA62553.1| 971|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z82283-4|CAB05286.1| 689|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z79600-6|CAB01879.2| 529|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 30 2.0
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 30 2.0
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 30 2.0
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 30 2.6
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 30 2.6
Z92812-3|CAB07282.2| 342|Caenorhabditis elegans Hypothetical pr... 29 3.4
U39851-11|AAV58883.1| 171|Caenorhabditis elegans Hypothetical p... 29 3.4
L13200-8|AAA28188.2| 324|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81051-1|CAB02862.3| 677|Caenorhabditis elegans Hypothetical
protein C55A6.2 protein.
Length = 677
Score = 35.5 bits (78), Expect = 0.052
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 257 YSPEKKESDNKAVLERLQSYLKDKKNTEVSDTSAGYSKPSTSYDPTTNTIPNIEDSSNIL 436
YSP ++ N+ ERL + KKNT+ S S+ S S S +++++ +IED S++
Sbjct: 518 YSPVMEDLGNEDFDERLFDEVVTKKNTKNSSGSSKASSSSASASSSSSSM-HIEDLSDLF 576
Query: 437 REVL 448
EV+
Sbjct: 577 HEVM 580
>U21323-10|AAW30670.1| 805|Caenorhabditis elegans Hypothetical
protein C45G9.10b protein.
Length = 805
Score = 31.5 bits (68), Expect = 0.85
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 350 TSAGYSKPSTSYDPTTN----TIPNIEDSSNILREVLNYK 457
TS Y +TSY PTTN +PN+ D N RE +N+K
Sbjct: 629 TSPTYIPVTTSYPPTTNPPSPALPNLIDFLNKERENVNFK 668
>U21323-9|AAA62553.1| 971|Caenorhabditis elegans Hypothetical
protein C45G9.10a protein.
Length = 971
Score = 31.5 bits (68), Expect = 0.85
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 350 TSAGYSKPSTSYDPTTN----TIPNIEDSSNILREVLNYK 457
TS Y +TSY PTTN +PN+ D N RE +N+K
Sbjct: 795 TSPTYIPVTTSYPPTTNPPSPALPNLIDFLNKERENVNFK 834
>Z82283-4|CAB05286.1| 689|Caenorhabditis elegans Hypothetical
protein T23G4.4 protein.
Length = 689
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 155 HFPLIHHKY*SIKHQQHCTQCKI*SYR*AMSRE-GYSPEKKESDNKAVLERLQSYLK 322
H L + Y H+ +CK +YR +M E G P +DN A +++L +++
Sbjct: 466 HIALFGNSYTKNHHKMFIQECKHRAYRISMDDETGCEPLTSPTDNAACIKKLPEFVE 522
>Z79600-6|CAB01879.2| 529|Caenorhabditis elegans Hypothetical
protein F59C6.8 protein.
Length = 529
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +2
Query: 287 KAVLERLQSYLKDKKNTEVSDTSA---GYSK-PSTSYDPTTNTIPNIEDSSNILREVLNY 454
++++ L +KD KNT +S SA G S+ S +DP T + +S + +L Y
Sbjct: 214 RSIITDLFKLIKDNKNTRISPWSAIRIGESRAASPMFDPNTE-LEFRNQASAMTDCLLQY 272
Query: 455 KK-AELLRQPDVTDFL 499
K+ AE + PD D L
Sbjct: 273 KEAAEFIVFPDPDDIL 288
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 272 KESDNKA-VLERLQSYLKDKKNTEVSDTSAGYSKPSTSYDPTTNTIPNIEDSSNILREVL 448
+E DN+ L RL+S L+ +++ +T Y + S T N+E + ILRE L
Sbjct: 1305 EEMDNQLNSLHRLKSTLQ----SQLDETRRNYDEESRERQALAATAKNLEHENTILREHL 1360
Query: 449 NYK---KAELLRQ 478
+ + KA+L RQ
Sbjct: 1361 DEEAESKADLTRQ 1373
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 272 KESDNKA-VLERLQSYLKDKKNTEVSDTSAGYSKPSTSYDPTTNTIPNIEDSSNILREVL 448
+E DN+ L RL+S L+ +++ +T Y + S T N+E + ILRE L
Sbjct: 1305 EEMDNQLNSLHRLKSTLQ----SQLDETRRNYDEESRERQALAATAKNLEHENTILREHL 1360
Query: 449 NYK---KAELLRQ 478
+ + KA+L RQ
Sbjct: 1361 DEEAESKADLTRQ 1373
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = +1
Query: 448 ELQKSRIASATRRNRLFKGNHERLEEVMAVAARKSVASLMQ-KTLDRQAALARTRLKFSE 624
E ++SR+ + R+N KG + R++ + A+ S L K L R R+R K+ +
Sbjct: 2594 EPRRSRVLNTIRKNDSLKGKNHRMKYEQPIDAKISDMFLKPWKPLRRSKKGIRSRKKY-K 2652
Query: 625 KXIEQILLNYAKTGNIGPYSELVRVLRDYPLXDENFRI 738
K ++ N K + P+ +++R L DY + + R+
Sbjct: 2653 KNVK--AKNTTKLQPM-PWKQMLRKLADYNVNIKRVRL 2687
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 266 EKKESDNKAVLERLQSYLKDKKNTEVSDTSAGYSKPSTSYD-PTTNTIPNIEDSSNILRE 442
EKK+ DNK V + + S L+ K + +++ SK S+S + P T PNI SS R
Sbjct: 424 EKKKDDNKTVGKSVVSILQGTKPSAPPASTSSSSKNSSSINSPKT---PNISGSSRRSRS 480
Query: 443 VLNYKKA 463
KA
Sbjct: 481 RAKRHKA 487
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 266 EKKESDNKAVLERLQSYLKDKKNTEVSDTSAGYSKPSTSYD-PTTNTIPNIEDSSNILRE 442
EKK+ DNK V + + S L+ K + +++ SK S+S + P T PNI SS R
Sbjct: 424 EKKKDDNKTVGKSVVSILQGTKPSAPPASTSSSSKNSSSINSPKT---PNISGSSRRSRS 480
Query: 443 VLNYKKA 463
KA
Sbjct: 481 RAKRHKA 487
>Z92812-3|CAB07282.2| 342|Caenorhabditis elegans Hypothetical
protein T03E6.3 protein.
Length = 342
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 353 SAGYSKPSTSYDPTTNTIPNIEDSSNILREVLNYKKAELLRQPDVTDFL 499
S G K S N IP + +L + N+KK E + QPD+ +
Sbjct: 153 STGKLKKSDKIALLRNFIPKLWQIDPLLNYIRNFKKYEAMEQPDLEQII 201
>U39851-11|AAV58883.1| 171|Caenorhabditis elegans Hypothetical
protein C23G10.2a protein.
Length = 171
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 586 QAALARTR-LKFSEKXIEQILLNYAKTGNIGPYSELVR 696
Q A+ RT+ L ++K QI+ + G IGPYS+ VR
Sbjct: 24 QDAVKRTKVLDMAQKVTRQIISSANAPGAIGPYSQAVR 61
>L13200-8|AAA28188.2| 324|Caenorhabditis elegans Hypothetical
protein ZK1236.7 protein.
Length = 324
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +2
Query: 269 KKESDNKAVLERLQSYLKDKKNTEVSDTSAGYSKPSTSYDPTTNTIPNIEDSSNILREVL 448
K+E+D KA ERL+ ++K+ E + A K S + + E++ N++R+ +
Sbjct: 176 KEEADEKAEEERLRKEREEKERKEHEEYLA--MKASFAIEEEGTDAIEGEEAENLIRDFV 233
Query: 449 NYKK 460
+Y K
Sbjct: 234 DYVK 237
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 28.3 bits (60), Expect = 7.9
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +2
Query: 266 EKKESDNKAVLERLQSYLKDKKNTEVSDTSAGYSKPSTSYDP-----TTNTIPNIEDSSN 430
+KK +K+ ++ + K+KK + SA S P T DP T N I N SN
Sbjct: 258 KKKNKKSKSKDKKKTASKKNKKKKKSKGESAS-STPQTPNDPETGVQTANEIRNDAPESN 316
Query: 431 ILREVLNYKKAELLRQPDV 487
+ + A++ +PDV
Sbjct: 317 VNTALSIRSPAQVAPEPDV 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,977,111
Number of Sequences: 27780
Number of extensions: 289645
Number of successful extensions: 903
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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