Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_E01
         (1062 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   1.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    22   4.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   5.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   5.0  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   8.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.3
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -3

Query: 910 GGXPXXGGXXPXXXXPPPXXGGGGGG 833
           GG P  GG       P P  GGGGGG
Sbjct: 209 GGAPGGGGGSSGG--PGPGGGGGGGG 232



 Score = 24.2 bits (50), Expect = 6.7
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 909 GGXPXXGGXXXXXXXPPPXXGGGGG 835
           GG P  GG       P P  GGGGG
Sbjct: 209 GGAPGGGGGSSGG--PGPGGGGGGG 231


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 8.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 821 PPXXSPPPPPXXGG 862
           PP   PPP P  GG
Sbjct: 588 PPPMGPPPSPLAGG 601



 Score = 23.0 bits (47), Expect(2) = 1.5
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +2

Query: 836 PPPPPXXGGGXXXXXXXPPXXGXPP 910
           PPPPP  GG        PP    PP
Sbjct: 530 PPPPPPPGGA---VLNIPPQFLPPP 551



 Score = 21.4 bits (43), Expect(2) = 1.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 824 PXXSPPPPPXXG 859
           P   PPPPP  G
Sbjct: 527 PLGPPPPPPPGG 538


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.2 bits (45), Expect(2) = 4.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 859 PXXGGGGGGXXG 824
           P  GGGGGG  G
Sbjct: 527 PNGGGGGGGGGG 538



 Score = 20.6 bits (41), Expect(2) = 4.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 850 GGGGGGXXGGK 818
           GGGGGG  G +
Sbjct: 533 GGGGGGREGSQ 543


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 5.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 859 PXXGGGGGGXXGG 821
           P  GGGGGG  GG
Sbjct: 650 PGSGGGGGGGGGG 662



 Score = 23.8 bits (49), Expect = 8.8
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 862 PPXXGGGGGGXXGG 821
           P   GGGGGG  GG
Sbjct: 650 PGSGGGGGGGGGGG 663


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 5.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -3

Query: 880 PXXXXPPPXXGGGGGGXXGG 821
           P     P   GGGGGG  GG
Sbjct: 537 PNGPVGPAGVGGGGGGGGGG 556


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 8.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 862  PPXXGGGGGGXXGGK 818
            P    GGGGG  GGK
Sbjct: 1490 PTKGAGGGGGGGGGK 1504


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,224
Number of Sequences: 2352
Number of extensions: 8383
Number of successful extensions: 87
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 118396512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)