Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_E01
(1062 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.46
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.46
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.46
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 28 0.63
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 32 0.80
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.2
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 29 4.2
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 29 7.4
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 7.4
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 28 9.8
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 28 9.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 9.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.46
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -3
Query: 736 GGGXPPPXXXGXXXGXXXPPPXKXXPWGRXXXXXXPP--XFLGDPPXXPXKKXF 581
GG PPP G PPP P G PP F G PP P F
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 31.9 bits (69), Expect = 0.80
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 735 GGGXPPPXXXGXXXXXKXPPPXXXPXGGXXKXXXPP 628
GG PPP G PPP P GG PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 821 PPXXSPPPPPXXGGGXXXXXXXPPXXGXPP 910
PP PPPP GG PP PP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 28.3 bits (60), Expect = 9.8
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 3/82 (3%)
Frame = -3
Query: 910 GGXPXXGGXXPXXXXPPPXXGGGG-GGXXGGKXXXXXXXXFXXXXXXPPXFFFXKXXXXG 734
GG P G P PPP GG GG PP G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP----PPPPPPG 766
Query: 733 G--GXPPPXXXGXXXGXXXPPP 674
G PPP G G PPP
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.46
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -3
Query: 736 GGGXPPPXXXGXXXGXXXPPPXKXXPWGRXXXXXXPP--XFLGDPPXXPXKKXF 581
GG PPP G PPP P G PP F G PP P F
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 31.9 bits (69), Expect = 0.80
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 735 GGGXPPPXXXGXXXXXKXPPPXXXPXGGXXKXXXPP 628
GG PPP G PPP P GG PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 821 PPXXSPPPPPXXGGGXXXXXXXPPXXGXPP 910
PP PPPP GG PP PP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 28.3 bits (60), Expect = 9.8
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 3/82 (3%)
Frame = -3
Query: 910 GGXPXXGGXXPXXXXPPPXXGGGG-GGXXGGKXXXXXXXXFXXXXXXPPXFFFXKXXXXG 734
GG P G P PPP GG GG PP G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP----PPPPPPG 766
Query: 733 G--GXPPPXXXGXXXGXXXPPP 674
G PPP G G PPP
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.46
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -3
Query: 736 GGGXPPPXXXGXXXGXXXPPPXKXXPWGRXXXXXXPP--XFLGDPPXXPXKKXF 581
GG PPP G PPP P G PP F G PP P F
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 31.9 bits (69), Expect = 0.80
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 735 GGGXPPPXXXGXXXXXKXPPPXXXPXGGXXKXXXPP 628
GG PPP G PPP P GG PP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 821 PPXXSPPPPPXXGGGXXXXXXXPPXXGXPP 910
PP PPPP GG PP PP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 28.3 bits (60), Expect = 9.8
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 3/82 (3%)
Frame = -3
Query: 910 GGXPXXGGXXPXXXXPPPXXGGGG-GGXXGGKXXXXXXXXFXXXXXXPPXFFFXKXXXXG 734
GG P G P PPP GG GG PP G
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP----PPPPPPG 349
Query: 733 G--GXPPPXXXGXXXGXXXPPP 674
G PPP G G PPP
Sbjct: 350 GCPPPPPPPPPGGFKGGPPPPP 371
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.3 bits (60), Expect(2) = 0.63
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 892 GGXXPXXXXPPPXXGGGGGGXXG 824
GG P PPP GGGGGG G
Sbjct: 268 GGGYPQ---PPPQQGGGGGGAGG 287
Score = 22.6 bits (46), Expect(2) = 0.63
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 850 GGGGGGXXGG 821
GGGGGG GG
Sbjct: 315 GGGGGGGMGG 324
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 31.9 bits (69), Expect = 0.80
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Frame = -3
Query: 772 PPXFFFXKXXXXGGGXPPPXXXGXXXGXXXPPP---XKXXPWGRXXXXXXPPXFLGDPPX 602
PP +F G PPP PPP PW R PP L PP
Sbjct: 25 PPPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPP 84
Query: 601 XP 596
P
Sbjct: 85 PP 86
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 910 GGXPXXGGXXPXXXXPPPXXGGGGGGXXGG 821
GG GG P PPP GGG GG GG
Sbjct: 44 GGGGCGGGCAPPP--PPPACGGGCGGGGGG 71
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 910 GGXPXXGGXXPXXXXPPPXXGGGGGGXXGG 821
GG GG P PPP GGG GG GG
Sbjct: 101 GGGGCGGGCAPPP--PPPACGGGCGGGGGG 128
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 4/52 (7%)
Frame = +2
Query: 821 PPXXSPPPPPXXGG----GXXXXXXXPPXXGXPPXKXFXXXPXXXXXXXXPP 964
PP SPPPPP G PP G PP P PP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 821 PPXXSPPPPPXXGGGXXXXXXXPPXXGXPP 910
PP SPPPPP G PP G PP
Sbjct: 275 PPTGSPPPPPAGGS------PPPPRAGSPP 298
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 821 PPXXSPPPPPXXGGGXXXXXXXPPXXGXPP 910
P SPPPPP G PP G P
Sbjct: 292 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 4/52 (7%)
Frame = +2
Query: 821 PPXXSPPPPPXXGG----GXXXXXXXPPXXGXPPXKXFXXXPXXXXXXXXPP 964
PP SPPPPP G PP G PP P PP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 821 PPXXSPPPPPXXGGGXXXXXXXPPXXGXPP 910
PP SPPPPP G PP G PP
Sbjct: 296 PPTGSPPPPPAGGS------PPPPRAGSPP 319
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 821 PPXXSPPPPPXXGGGXXXXXXXPPXXGXPP 910
P SPPPPP G PP G P
Sbjct: 313 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 4/52 (7%)
Frame = +2
Query: 821 PPXXSPPPPPXXGG----GXXXXXXXPPXXGXPPXKXFXXXPXXXXXXXXPP 964
PP SPPPPP G PP G PP P PP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 821 PPXXSPPPPPXXGGGXXXXXXXPPXXGXPP 910
PP SPPPPP G PP G PP
Sbjct: 281 PPTGSPPPPPAGGS------PPPPRAGSPP 304
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 821 PPXXSPPPPPXXGGGXXXXXXXPPXXGXPP 910
P SPPPPP G PP G P
Sbjct: 298 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 3.2
Identities = 30/117 (25%), Positives = 33/117 (28%), Gaps = 6/117 (5%)
Frame = -3
Query: 928 GXKXFXGGXPXXGGXXPXXXXPP-PXXGGGGGGXXGGKXXXXXXXXFXXXXXXPPXFFFX 752
G GG P GG PP P G G P ++
Sbjct: 1488 GGPPMRGGPPMRGGPPMFRGGPPGPGRGMPSPMMRGSSMRGGFPQRGGGPGMGPSQYYHD 1547
Query: 751 KXXXXG---GGXPPPXXXGXXXGXXXPPPXKXXPW--GRXXXXXXPPXFLGDPPXXP 596
G GG PPP G PPP + G PP LG PP P
Sbjct: 1548 SPQNRGPPMGGLPPPHG-GMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGP 1603
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 892 GGXXPXXXXPPPXXGGGGGGXXG 824
GG P PP GGGGGG G
Sbjct: 865 GGGGPPGYQRPPYRGGGGGGYHG 887
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 28.7 bits (61), Expect = 7.4
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -3
Query: 730 GXPPPXXXGXXXGXXXPPPXKXXPWGRXXXXXXPPXFLGDPPXXP 596
G PPP G PP PW R PP G PP P
Sbjct: 92 GPPPPDFDGWHHHHHHRPPWMRGPWWR-----RPPPPWGPPPPGP 131
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 7.4
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = -2
Query: 773 PPXIFFXEXXXXWGGXXPPPXXXXXXGXXXPPPXXXXPXGEXXXXXXPPXXFGGP 609
PP F +GG PPP G PPP P PP FG P
Sbjct: 352 PPQQFHAPSPQSFGG--PPPPVSSAPGNFAPPPQSGPPGA----FAPPPSAFGAP 400
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 865 PPPXXGGGGGGXXGGK 818
PPP GGG GG GG+
Sbjct: 29 PPPSKGGGAGGGGGGE 44
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 865 PPPXXGGGGGGXXGGK 818
PPP GGG GG GG+
Sbjct: 29 PPPSKGGGAGGGGGGE 44
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 865 PPPXXGGGGGGXXGGK 818
PPP GGG GG GG+
Sbjct: 29 PPPSKGGGAGGGGGGE 44
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 9.8
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = -1
Query: 792 FXXXKXPPXXFFXXKXXXLGGGXPPPXXXGXXXXXKXPPPXXXPXGGXXKXXXPP 628
F K PP F + G PPP G PPP P GG PP
Sbjct: 737 FDPNKPPPPMF---QQGFNAGAPPPPFGRGAGPMSSFPPP---PRGGMHHMPPPP 785
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,096,794
Number of Sequences: 27780
Number of extensions: 269003
Number of successful extensions: 1372
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2835266498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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