Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_D21
(949 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.074
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.074
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.074
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.30
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.30
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.30
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 33 0.39
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.69
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.69
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 2.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 2.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.8
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 29 3.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.4
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.074
Identities = 27/96 (28%), Positives = 31/96 (32%)
Frame = +2
Query: 644 PPXRXPQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPPXXRXXXXXXXXRF*KXT 823
PP P + G P PPPP GG PPPP R T
Sbjct: 258 PPAAGSPPPPRTGSPPPPPT---GSPPPPPAGGS-----PPPPRAGSPPPPPPPRGSPPT 309
Query: 824 RGXPXPXKTPPXXPPFFXXPPXXXKXKKXSPLXSPP 931
P P P PP + K+ +P SPP
Sbjct: 310 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 345
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.074
Identities = 27/96 (28%), Positives = 31/96 (32%)
Frame = +2
Query: 644 PPXRXPQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPPXXRXXXXXXXXRF*KXT 823
PP P + G P PPPP GG PPPP R T
Sbjct: 279 PPAAGSPPPPRTGSPPPPPT---GSPPPPPAGGS-----PPPPRAGSPPPPPPPRGSPPT 330
Query: 824 RGXPXPXKTPPXXPPFFXXPPXXXKXKKXSPLXSPP 931
P P P PP + K+ +P SPP
Sbjct: 331 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 366
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.074
Identities = 27/96 (28%), Positives = 31/96 (32%)
Frame = +2
Query: 644 PPXRXPQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPPXXRXXXXXXXXRF*KXT 823
PP P + G P PPPP GG PPPP R T
Sbjct: 264 PPAAGSPPPPRTGSPPPPPT---GSPPPPPAGGS-----PPPPRAGSPPPPPPPRGSPPT 315
Query: 824 RGXPXPXKTPPXXPPFFXXPPXXXKXKKXSPLXSPP 931
P P P PP + K+ +P SPP
Sbjct: 316 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 351
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.30
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +3
Query: 423 PPXPPGXXGXFXFWGPPXXFPPXKKPXXPPXXXXXXXXXVXXPPPXGGXXXXFPPKXXGG 602
PP PPG PP PP P PP PPP G P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDY 803
Query: 603 XPP 611
PP
Sbjct: 804 LPP 806
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 644 PPXRXPQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPP 772
PP P PP PPPP GG PPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/91 (27%), Positives = 25/91 (27%)
Frame = +2
Query: 659 PQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPPXXRXXXXXXXXRF*KXTRGXPX 838
P T PP PPPP G PPPP G P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL--------PPISGGPP 759
Query: 839 PXKTPPXXPPFFXXPPXXXKXKKXSPLXSPP 931
P PP P PP K P PP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.30
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +3
Query: 423 PPXPPGXXGXFXFWGPPXXFPPXKKPXXPPXXXXXXXXXVXXPPPXGGXXXXFPPKXXGG 602
PP PPG PP PP P PP PPP G P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDY 803
Query: 603 XPP 611
PP
Sbjct: 804 LPP 806
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 644 PPXRXPQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPP 772
PP P PP PPPP GG PPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/91 (27%), Positives = 25/91 (27%)
Frame = +2
Query: 659 PQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPPXXRXXXXXXXXRF*KXTRGXPX 838
P T PP PPPP G PPPP G P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL--------PPISGGPP 759
Query: 839 PXKTPPXXPPFFXXPPXXXKXKKXSPLXSPP 931
P PP P PP K P PP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.30
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +3
Query: 423 PPXPPGXXGXFXFWGPPXXFPPXKKPXXPPXXXXXXXXXVXXPPPXGGXXXXFPPKXXGG 602
PP PPG PP PP P PP PPP G P
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDY 386
Query: 603 XPP 611
PP
Sbjct: 387 LPP 389
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 644 PPXRXPQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPP 772
PP P PP PPPP GG PPPP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/91 (27%), Positives = 25/91 (27%)
Frame = +2
Query: 659 PQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPPXXRXXXXXXXXRF*KXTRGXPX 838
P T PP PPPP G PPPP G P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL--------PPISGGPP 342
Query: 839 PXKTPPXXPPFFXXPPXXXKXKKXSPLXSPP 931
P PP P PP K P PP
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 32.7 bits (71), Expect = 0.39
Identities = 29/98 (29%), Positives = 34/98 (34%), Gaps = 1/98 (1%)
Frame = +2
Query: 641 GPPXRXPQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPPXXRXXXXXXXXRF*KX 820
GPP P P GPP + PPPP G + PPP F
Sbjct: 77 GPPG--PSGP--SGPPVYHNQGPPRGYPPPPPQGADTWRGAPPPAHHGHFGPPGHHF--- 129
Query: 821 TRGXPXPXKTPPXXP-PFFXXPPXXXKXKKXSPLXSPP 931
+G P PP P P F PP + + P PP
Sbjct: 130 -QG--PPQHFPPGPPRPHFPGPPGPHRPPEHYP--GPP 162
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.69
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 602 PPXXFGGKTXXXPPXGGGXXNPLPPXPKXPXGP 504
PP FG PP G G P PP PK P P
Sbjct: 107 PPPMFGAPPPPPPPSGLGVA-PQPPRPKTPVNP 138
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.69
Identities = 26/100 (26%), Positives = 27/100 (27%), Gaps = 1/100 (1%)
Frame = +3
Query: 438 GXXGXFXFWGPPXXFPPXKKPXXPPXXXXXXXXXVXXPPPXGGXXXXFPPKXXGGXP-PX 614
G G + PP PP P PP PPP G PP G P P
Sbjct: 255 GYQGQYPPVPPP---PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 311
Query: 615 XKXXFXPXXXXXXXXXXXXXXRXPPXLXXXFXXXGPPPPP 734
P PP G PPPP
Sbjct: 312 GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 351
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/81 (28%), Positives = 23/81 (28%)
Frame = +2
Query: 644 PPXRXPQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPPXXRXXXXXXXXRF*KXT 823
PP P PP PPPP PPPP R T
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGR-------------T 307
Query: 824 RGXPXPXKTPPXXPPFFXXPP 886
G P PP PP PP
Sbjct: 308 PGPPGMPGMPPPPPPSRFGPP 328
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 641 GPPXRXPQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPPXXR 781
GPP P P P F PPPP G PPPP R
Sbjct: 309 GPPGM-PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 354
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 5/68 (7%)
Frame = +3
Query: 423 PPXPPGXXGXFXFWGPPXXFPPXKK-----PXXPPXXXXXXXXXVXXPPPXGGXXXXFPP 587
PP PP G G P PP + P PP + PPP PP
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS--RPPAPP 375
Query: 588 KXXGGXPP 611
G PP
Sbjct: 376 SGHGMIPP 383
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.69
Identities = 26/100 (26%), Positives = 27/100 (27%), Gaps = 1/100 (1%)
Frame = +3
Query: 438 GXXGXFXFWGPPXXFPPXKKPXXPPXXXXXXXXXVXXPPPXGGXXXXFPPKXXGGXP-PX 614
G G + PP PP P PP PPP G PP G P P
Sbjct: 265 GYQGQYPPVPPP---PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 321
Query: 615 XKXXFXPXXXXXXXXXXXXXXRXPPXLXXXFXXXGPPPPP 734
P PP G PPPP
Sbjct: 322 GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 361
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/81 (28%), Positives = 23/81 (28%)
Frame = +2
Query: 644 PPXRXPQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPPXXRXXXXXXXXRF*KXT 823
PP P PP PPPP PPPP R T
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGR-------------T 317
Query: 824 RGXPXPXKTPPXXPPFFXXPP 886
G P PP PP PP
Sbjct: 318 PGPPGMPGMPPPPPPSRFGPP 338
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 641 GPPXRXPQTPXKKGPPXFXXXFXXXXAPPPPXGGXXXKKXPPPPXXR 781
GPP P P P F PPPP G PPPP R
Sbjct: 319 GPPGM-PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 364
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 5/68 (7%)
Frame = +3
Query: 423 PPXPPGXXGXFXFWGPPXXFPPXKK-----PXXPPXXXXXXXXXVXXPPPXGGXXXXFPP 587
PP PP G G P PP + P PP + PPP PP
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS--RPPAPP 385
Query: 588 KXXGGXPP 611
G PP
Sbjct: 386 SGHGMIPP 393
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Frame = +2
Query: 722 PPPPXGGXXXKKXPPPPXXRXXXXXXXXRF*KXTRGXPXPXKTPPXXPPFF----XXPPX 889
PPPP G PPPP K G P P PP PP F P
Sbjct: 539 PPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPP--PPPPPPPSFMFNGKVPNA 596
Query: 890 XXKXKKXSPLXSP 928
SP+ SP
Sbjct: 597 FSPGTSTSPVLSP 609
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/63 (33%), Positives = 22/63 (34%)
Frame = +3
Query: 423 PPXPPGXXGXFXFWGPPXXFPPXKKPXXPPXXXXXXXXXVXXPPPXGGXXXXFPPKXXGG 602
PP P G G GPP F P + PP PP GG F P G
Sbjct: 181 PPGPFGPSGAPPSGGPPGPFNPSE---APPSGGPTGPFDPSGAPPSGGPPGPFNP---SG 234
Query: 603 XPP 611
PP
Sbjct: 235 APP 237
Score = 28.7 bits (61), Expect = 6.4
Identities = 27/106 (25%), Positives = 27/106 (25%), Gaps = 2/106 (1%)
Frame = +3
Query: 423 PPXPPGXXGXFXFWGPPXXFPPXKKPXXPPXXXXXXXXXVXXPPPXGGXXXXFPPK--XX 596
PP P G GPP F P PP PP GG F P
Sbjct: 466 PPGPFNPSGAPPSGGPPGPFDP---SGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 522
Query: 597 GGXPPXXKXXFXPXXXXXXXXXXXXXXRXPPXLXXXFXXXGPPPPP 734
G PP P R P G PP P
Sbjct: 523 SGMPPVPLPTDLPIPSESPSFFQWIFGRPKPSGPAGPAPSGEPPGP 568
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Frame = +2
Query: 722 PPPPXGGXXXKKXPPPPXXRXXXXXXXXRF*KXTR---GXPXPXKTPPXXPPFFXXPPXX 892
PPPP PPPP R R P P + PP PP P
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP--SPEPRN 182
Query: 893 XKXKKXSPLXSPP 931
SP+ PP
Sbjct: 183 PPRTPPSPIPPPP 195
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.3 bits (65), Expect = 2.1
Identities = 30/122 (24%), Positives = 36/122 (29%), Gaps = 1/122 (0%)
Frame = -2
Query: 768 GGGXFXXXXPPXGGGGAXLXXKXXXXXGGPFXXGVWGXLXGGPXXXKKXFFXXGXSPXXF 589
GGG + GG G GGP G+ G GG + G
Sbjct: 115 GGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGG 174
Query: 588 WGENXXXPPXWGGXXKXXXXXPQXXXGAXGVFXGGEXGXG-GPKXEKXPXPPGGXGGXFX 412
+G GG G G GG G G G + P GG GG +
Sbjct: 175 YGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYG 234
Query: 411 CG 406
G
Sbjct: 235 PG 236
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = +2
Query: 668 PXKKGPPXFXXXFXXXXAPPPP--XGGXXXKKXPPPP 772
P K PP F F APPPP G PPPP
Sbjct: 739 PNKPPPPMFQQGF-NAGAPPPPFGRGAGPMSSFPPPP 774
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 471 GGPKXEKXPXPPGGXGGXFXCGKKTXPXXPPG 376
GGP + P PPGG G G + P PPG
Sbjct: 153 GGPGPKGPPGPPGGHGEPGPAG-RGGPRGPPG 183
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +3
Query: 426 PXPPGXXGXFXFWGPPXXFPPXKKPXXPPXXXXXXXXXVXXPPPXGGXXXXFPPKXXGGX 605
P PPG G +GPP P P P PPP G PP G
Sbjct: 411 PPPPGGPGAPGSYGPPQGGPGGFGPPPP------GGPGAYGPPPTGFPPVGAPPPGAAGA 464
Query: 606 P 608
P
Sbjct: 465 P 465
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 722 PPPPXGGXXXKKXPPPP 772
PPPP GG PPPP
Sbjct: 43 PPPPCGGGYEAPPPPPP 59
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 549 PPPXGGXXXXFPPKXXGGXPP 611
PPP GG PP GG PP
Sbjct: 1574 PPPRGGSHCQGPPPLMGGPPP 1594
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,425,265
Number of Sequences: 27780
Number of extensions: 269166
Number of successful extensions: 1341
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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