Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_D20
(1016 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 62 5e-10
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 62 5e-10
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 57 2e-08
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 56 5e-08
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 50 4e-06
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 47 2e-05
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 44 2e-04
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 44 2e-04
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 43 3e-04
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 40 0.003
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 40 0.004
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 40 0.004
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 40 0.004
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 36 0.046
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 35 0.11
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 35 0.11
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 33 0.25
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 33 0.33
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.33
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.33
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 33 0.33
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 7.0
U12964-14|AAU05575.1| 692|Caenorhabditis elegans Arginyl aa-trn... 29 7.0
U12964-13|AAA91224.2| 713|Caenorhabditis elegans Arginyl aa-trn... 29 7.0
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 62.5 bits (145), Expect = 5e-10
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +1
Query: 181 DIVKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLP 360
D+V ++ + +++ V F E+++V + D+ ++IE KH EK D+ G + RHFVRKY LP
Sbjct: 49 DVVNNDQE-YNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLP 107
Query: 361 QGKSTQQ 381
G +Q
Sbjct: 108 TGVRPEQ 114
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 62.5 bits (145), Expect = 5e-10
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +1
Query: 181 DIVKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLP 360
D+V ++ + +++ V F E+++V + D+ ++IE KH EK D+ G + RHFVRKY LP
Sbjct: 48 DVVNNDQE-YNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLP 106
Query: 361 QGKSTQQ 381
G +Q
Sbjct: 107 TGVRPEQ 113
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +1
Query: 151 WLENLPWHDGDI-VKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFI 327
W L +DG + V K++FE+ L V+ FT ++I+VKV+ ++I +HE + D G +
Sbjct: 14 WDWPLQHNDGVVKVHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTV 73
Query: 328 SRHFVRKYKLPQ--GKSTQQNHINAIG 402
+R R YKLP ST ++H+ G
Sbjct: 74 AREINRAYKLPDDVDVSTVKSHLATRG 100
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 55.6 bits (128), Expect = 5e-08
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +1
Query: 205 RFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQ 363
RF +++ F E+IQVK DD ++IE +HE+ +D+ F +FVRKY+LP+
Sbjct: 113 RFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKYQLPR 165
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 49.6 bits (113), Expect = 4e-06
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +1
Query: 142 SVDWLENLPWHDGDI-VKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQ 318
S DW L +DG + V ++FE+ L F I VKV I+I +H+ + E
Sbjct: 13 SWDW--PLQHNDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEY 70
Query: 319 GFISRHFVRKYKLPQ--GKSTQQNHINAIG 402
G ++R R YKLP+ ST ++H+N+ G
Sbjct: 71 GIVNREVHRTYKLPEDVDPSTVRSHLNSSG 100
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +1
Query: 166 PWHDGD-IVKT--QKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRH 336
P+ GD +VK +D FE+ L +F +I VK +F+ I H K D+ G I+R
Sbjct: 16 PFQKGDGVVKVLDYEDHFEVGLEAHNFLPNEIDVKNIGEFLEIHMAHTTKDDKFGSITRS 75
Query: 337 FVRKYKLPQG 366
R Y+LP+G
Sbjct: 76 ITRCYRLPKG 85
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 175 DGDI-VKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKY 351
DG + V D FE+ L +F ++I+VK + + I +H KKD G +SR+ R Y
Sbjct: 22 DGVVNVLDDDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCY 81
Query: 352 KLPQ 363
KLP+
Sbjct: 82 KLPK 85
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 175 DGDI-VKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKY 351
DG + V D FE+ L +F ++I+VK + + I +H KKD G +SR+ R Y
Sbjct: 22 DGVVNVLDDDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCY 81
Query: 352 KLPQ 363
KLP+
Sbjct: 82 KLPK 85
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = +1
Query: 142 SVDWLENLPWHDGDI-VKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKH---EEKK 309
S DW L +DG + V ++FE+ L F I VKV I+I +H + +
Sbjct: 13 SWDW--PLQHNDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRP 70
Query: 310 DEQGFISRHFVRKYKLPQ--GKSTQQNHINAIG 402
E G ++R R YKLP+ ST ++H+N+ G
Sbjct: 71 TEYGIVNREVHRTYKLPEDVDPSTVRSHLNSSG 103
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = +1
Query: 142 SVDWLENLPWHDGDI-VKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKH---EEKK 309
S DW L +DG + V ++FE+ L F I VKV I+I +H + +
Sbjct: 13 SWDW--PLQHNDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRP 70
Query: 310 DEQGFISRHFVRKYKLPQ--GKSTQQNHINAIG 402
E G ++R R YKLP+ ST ++H+N+ G
Sbjct: 71 TEYGIVNREVHRTYKLPEDVDPSTVRSHLNSSG 103
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 187 VKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQG 366
++ F L V + A+ ++V V D+ I++E H EK+D G I F R++ LP+
Sbjct: 74 IRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLPKA 133
Query: 367 KSTQ--QNHINAIG 402
+ + Q+ + A G
Sbjct: 134 VAPESVQSQLTADG 147
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +1
Query: 187 VKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQG 366
V+ +F + L V F E+++V + + IE H E K E GF R F R++ LP
Sbjct: 46 VENTAQKFCVKLDVAAFKPEELKVNLEGHVLTIEG-HHEVKTEHGFSKRSFTRQFTLP-- 102
Query: 367 KSTQQNHINAI 399
K HI+ +
Sbjct: 103 KDVDLAHIHTV 113
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 151 WLENLPWHDGDIVKTQKDRFEINLL--VKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGF 324
+L+NL ++K + D + L V ++ E++ VK D+ +++ AKHEE K Q
Sbjct: 10 YLDNLK---SPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE-KTPQRT 65
Query: 325 ISRHFVRKYKLPQGKSTQQ 381
+ R + +++ LP+G + +Q
Sbjct: 66 VFREYNQEFLLPRGTNPEQ 84
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 362 RXSQPNKITSTLSADGVLKIVVP 430
R + P +I+STLS DGVL + P
Sbjct: 78 RGTNPEQISSTLSTDGVLTVEAP 100
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 151 WLENLPWHDGDIVKTQKDRFEINLL--VKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGF 324
+L+NL ++K + D + L V ++ E++ VK D+ +++ AKHEE K Q
Sbjct: 107 YLDNLK---SPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE-KTPQRT 162
Query: 325 ISRHFVRKYKLPQGKSTQQ 381
+ R + +++ LP+G + +Q
Sbjct: 163 VFREYNQEFLLPRGTNPEQ 181
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 362 RXSQPNKITSTLSADGVLKIVVP 430
R + P +I+STLS DGVL + P
Sbjct: 175 RGTNPEQISSTLSTDGVLTVEAP 197
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 151 WLENLPWHDGDIVKTQKDRFEINLL--VKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGF 324
+L+NL ++K + D + L V ++ E++ VK D+ +++ AKHEE K Q
Sbjct: 121 YLDNLK---SPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE-KTPQRT 176
Query: 325 ISRHFVRKYKLPQGKSTQQ 381
+ R + +++ LP+G + +Q
Sbjct: 177 VFREYNQEFLLPRGTNPEQ 195
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 362 RXSQPNKITSTLSADGVLKIVVP 430
R + P +I+STLS DGVL + P
Sbjct: 189 RGTNPEQISSTLSTDGVLTVEAP 211
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 35.9 bits (79), Expect = 0.046
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 166 PWHDGDIVKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVR 345
P D + D+F +NL V +F E+++V + + I+ +H + ++E G + F R
Sbjct: 38 PMTDDSEIMNSNDKFAVNLNVSNFKPEELKVNLEGRQLSIQGEH-DVENEHGASRKSFSR 96
Query: 346 KYKLPQ 363
LP+
Sbjct: 97 MILLPE 102
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 34.7 bits (76), Expect = 0.11
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 178 GDIVKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 357
G+I T F I + V F E+I+V + DD + I + E + + R F RKY +
Sbjct: 95 GEITNTSHG-FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSI 153
Query: 358 P 360
P
Sbjct: 154 P 154
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 34.7 bits (76), Expect = 0.11
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 178 GDIVKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 357
G+I T F I + V F E+I+V + DD + I + E + + R F RKY +
Sbjct: 95 GEITNTSHG-FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSI 153
Query: 358 P 360
P
Sbjct: 154 P 154
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 33.5 bits (73), Expect = 0.25
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 178 GDIVKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 357
G+ + + +F + L V F E +++++ + IE +EKK E G+ R F + L
Sbjct: 45 GEQIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILL 103
Query: 358 PQ 363
P+
Sbjct: 104 PE 105
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 33.1 bits (72), Expect = 0.33
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1
Query: 178 GDIVKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 357
G+IV + +F + L V F E +++++ + IE +EKK E G+ R F + L
Sbjct: 37 GEIVNDES-KFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILL 94
Query: 358 PQ 363
P+
Sbjct: 95 PE 96
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 33.1 bits (72), Expect = 0.33
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1
Query: 178 GDIVKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 357
G+IV + +F + L V F E +++++ + IE +EKK E G+ R F + L
Sbjct: 45 GEIVNDES-KFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILL 102
Query: 358 PQ 363
P+
Sbjct: 103 PE 104
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 33.1 bits (72), Expect = 0.33
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1
Query: 178 GDIVKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 357
G+IV + +F + L V F E +++++ + IE +EKK E G+ R F + L
Sbjct: 45 GEIVNDES-KFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILL 102
Query: 358 PQ 363
P+
Sbjct: 103 PE 104
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 33.1 bits (72), Expect = 0.33
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1
Query: 178 GDIVKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 357
G+IV + +F + L V F E +++++ + IE +EKK E G+ R F + L
Sbjct: 45 GEIVNDES-KFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILL 102
Query: 358 PQ 363
P+
Sbjct: 103 PE 104
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 31.5 bits (68), Expect = 0.99
Identities = 15/61 (24%), Positives = 36/61 (59%)
Frame = +1
Query: 181 DIVKTQKDRFEINLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLP 360
+IV T ++F +NL V D E++++ + + I+A+H+E +++ ++ + + LP
Sbjct: 43 EIVDTH-EKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSIVLP 101
Query: 361 Q 363
+
Sbjct: 102 E 102
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 226 VKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGKSTQQNHI 390
VKD A + + + D FI +KH E ++ I R + Q K Q++ +
Sbjct: 2077 VKDHKASAVNIDLDDVFIQRSSKHPENDEDDEKIRRGIAEFERTKQEKEAQRSTV 2131
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 226 VKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGKSTQQNHI 390
VKD A + + + D FI +KH E ++ I R + Q K Q++ +
Sbjct: 2077 VKDHKASAVNIDLDDVFIQRSSKHPENDEDDEKIRRGIAEFERTKQEKEAQRSTV 2131
>U12964-14|AAU05575.1| 692|Caenorhabditis elegans Arginyl aa-trna
synthetase protein1, isoform b protein.
Length = 692
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +1
Query: 124 DEFVLRSVDWLENLPWHDGDIVKTQKDRFEINLLVKDFTAEQIQVKVAD 270
++F R+ +++ L HDGDIVK +++ + +K+ D
Sbjct: 336 EQFKKRAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKD 384
>U12964-13|AAA91224.2| 713|Caenorhabditis elegans Arginyl aa-trna
synthetase protein1, isoform a protein.
Length = 713
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +1
Query: 124 DEFVLRSVDWLENLPWHDGDIVKTQKDRFEINLLVKDFTAEQIQVKVAD 270
++F R+ +++ L HDGDIVK +++ + +K+ D
Sbjct: 336 EQFKKRAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKD 384
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,908,440
Number of Sequences: 27780
Number of extensions: 293143
Number of successful extensions: 801
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2678332928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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