Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D19
         (934 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   5.7  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   7.6  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 11/34 (32%), Positives = 11/34 (32%)
 Frame = +3

Query: 498 PXXXXGXPPXPGXTPXKPXXPKAPXXPXPXKSPP 599
           P      PP PG  P  P  P     P     PP
Sbjct: 79  PPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPP 112


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 15/61 (24%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
 Frame = +3

Query: 489 PXPPXXXXGXPPXPGXTPXKPXXPKAPXXPXPXKSPP--XXRSXXRXXPXPNXXQGRDNV 662
           P PP    G        P     P+    P P KSP     +   +  P P   + +D  
Sbjct: 159 PSPPITVSGSDMSSPGAPTGSSSPQITPRPTPVKSPYEWMKKQSYQSQPNPGKTRTKDKY 218

Query: 663 R 665
           R
Sbjct: 219 R 219


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,327
Number of Sequences: 2352
Number of extensions: 6661
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101708946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)