Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D18
         (889 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.79 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   7.4  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   9.8  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   9.8  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
 Frame = -2

Query: 327 QSRDAYINGSL*FKNHI--INAENITQSNHSHMIGIIITIKQNFVH--GFLYIILIVFMF 160
           ++RD +I   +   N    I A  + + ++S ++ +++ I  NFV   G LY+ L + + 
Sbjct: 182 EARDDFIKLGIKLSNDKLEITACRLFKIDNSLILDLLVFITINFVVLLGDLYVTLYIILT 241

Query: 159 KRVGNYC*DL--SYK*VCRG*YYLYYWTYHCXXXXXXXIQEILR 34
                YC  L    K      + LYY ++ C       I  ILR
Sbjct: 242 NNQAKYCTTLIGLIKNCVIVIFELYYLSHVCQNVSTEVIGNILR 285


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +1

Query: 397 NPQEQRPTKFTIVYSKQNRSETYKIRSSPRA*VYSNRFLRTERHDFA 537
           +P +    KF   +     S      +SP + + SNRF   E  D A
Sbjct: 106 DPDDVFIRKFETSFESGKPSGVISTNTSPPSPILSNRFGENEEADAA 152


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 382 ENKNHNPQEQRP 417
           EN++H P+ +RP
Sbjct: 68  ENRSHEPEMERP 79


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 382 ENKNHNPQEQRP 417
           EN++H P+ +RP
Sbjct: 88  ENRSHEPEMERP 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,973
Number of Sequences: 336
Number of extensions: 3686
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)